ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140208 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◣ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD2
RGPD1
MTRNR2L9
FRMPD4
HDAC9
MAMDC2
MTRNR2L10
EMILIN2
PCM1
ZBTB38
SLC25A20
FNDC3A
SSBP1
PPP5D1
CALM3
TOP2A
EPS15
ARID5B
IARS2
BPNT1
MTRNR2L1
CCL3
SYT7
RPAIN
NUP88
INO80C
CSDE1
HNRNPUL1
BRWD1
GLIPR1L1
CAPS2
TRAPPC9
PTEN
KLLN
INTS10
SPATC1L
UBE2J1
SF3A3
MYOM2
PMF1-BGLAP
PMF1
ARHGAP17
TJP3
PHF19
SIX1
PNKP
ARHGEF2
ENPP4
CLIC5
KLHL29
TOMM40L
DENND1B
APOA2
KLF2
PROSER3
HSPB6
ATP2C1
KLF6
FUT10
TARS2
CCDC90B
RAB11B
MRPS18C
HELQ
RAP2B
C1orf198
NGB
GCLC
LNPEP
MDM2
SCT
CDHR5
ACTL6A
WDR74
RUFY3
H4C4
TRIP4
CXCR5
CCL5
CCDC39
ATP6V1G1
PSPN
ALKBH7
TMEM256
NLGN2
MDM4
SMCO1
ZPBP2
IKZF3
NCOA7
MNT
ILF2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
NAT16
HCAR3
CHST12
KATNB1
ANP32C
KMT2C
EML2
DPP9
POLG
FGG
CRYAA2
CRYAA
XAB2
PCP2
RGS8
DUX4
SKA2
PRR11
KANSL3
FER1L5
TJP1
NDUFS7
UBE2H
DRAP1
C11orf68
COMMD2
LOC102723996
ICOSLG
USP3
MUC3A
CCM2
MRPS23
HSD11B1
CDYL
CDC20
USP30
PSMD4
MED23
LIME1
SMARCD2
WHAMM
FSD2
AURKAIP1
TRIM48
FMO4
TP63
BBX
FOXK1
FAAP24
CEP89
LEFTY2
CMSS1
TEPSIN
NDUFAF8
HOOK1
AQR
LSG1
RAD51AP2
C2orf42
RBBP5
TPST1
RAD51AP1
C16orf72
C12orf4
WBP1L
WAPL
SELENOH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
INSR
H4C14
H4C15
GBA
SATB1
KDSR
CSNK1G3
CCR2
H4C3
H1-6
CRB1
TACO1
SPTLC3
KIF16B
TIMM22
LRRC14B
PRPF18
INTS1
TMEM109
SLC33A1
PRPF19
NR1H2
CCDC77
PWWP2A
STAP2
MPND
DPEP3
DHX8
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
POLR3F
DZANK1
ARHGEF1
STOML2
MFAP3L
ERVMER34-1
EPYC
COPZ1
CCL3L3
CCL3L1
ZNF451
TYK2
RBM28
SCNM1
LYSMD1
ZNF609
TLR5
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
MYCBP2
EPRS1
NDUFS3
KBTBD4
DHX16
CLEC7A
NPIPB5
CHD6
RHOT2
PNISR
GORAB
BIN2
KHSRP
PPP6R1
RPL35A
IQCG
ZSWIM1
UNC93B1
RAB40B
HAX1
ECT2
CRYBB1
NUF2
COMMD1
CCT4
SLC9A1
OXCT2
MAPKAPK2
KLHL20
PLCD3
DMAP1
ARNTL
ACBD4
LTA4H
TDRKH
SMARCA4
IFIT1
TMEM107
MGP
NLK
SSR3
TSC1
PSAP
MTFR2
GFI1B
TOMM40
MACIR
TUT1
SCAMP4
MYNN
EMX1
CLPTM1L
ADAT3
ACTRT3
FRG2
UTP3
ZNF668
ZNF646
SH3GL1
P2RY10
OCSTAMP
DAPK3
CHAF1A
EVI5L
BAHCC1
NSMCE3
FAM207A
CSTB
TFB2M
CYP2R1
CNST
CCDC61
KIF22
ITGB1BP1
CPSF3
ZBTB5
FRG2C
YJU2
ZNF718
ZNF595
ZMPSTE24
STBD1
PGP
LCOR
FAM184A
BRICD5
FLAD1
EIF2AK3
TTC21A
RAB11A
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
ALKBH6
METTL26
UBE2I
WIPF1
RSF1
POLR2J3
MCRIP2
AAMDC
TMEM218
STK17B
LYZL2
GGCT
PRR14
UTS2R
TRNAU1AP
SRI
KCNN3
KAT7
DNAJC14
CCDC167
PRRG2
NOSIP
TAS2R38
NAA35
GSR
ATP5MC2
OSBPL2
ADRM1
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
ZBTB32
TNFRSF17
NPIPB2
NBEAL2
KCNH1
DDX1
CCNC
RFX1
SMARCE1
ISOC2
GOLPH3L
FMO1
RPS27
RAB13
NUCKS1
IDH2
HSD17B4
SF3B6
FAM228B
PCDH1
NCBP2AS2
NCBP2
MORC3
HARBI1
DCP1A
ATG13
CCNL1
TLDC2
TAF3
BABAM1
AP2M1
PAFAH2
H4C12
UBE2T
INTS4
GATD3B
GATD3A
CHD9
AK2
RPL27
GABPB2
ZNF519
TRAPPC6A
PPP1R37
MRPS17
MKNK2
EMID1
BLOC1S3
ALG10B
AHCY
PRICKLE4
LRRC45
FRS3
FBXO11
CENPX
ARL1
TLR4
TAB1
RSPH6A
NR1D1
MLLT1
GTF2H2
FLT3LG
PSMD5
FAM72D
FAM72C
KRR1
TATDN3
NSL1
TSACC
THADA
STIL
CCT3
SLC25A25
RABEP1
PXMP4
FBXO40
EIF4A2
PARP8
LY9
GOT1
DNM2
SLC39A3
RBSN
P4HB
NOTCH2
NOL6
TIPRL
SOD1
SLC9C1
PLEKHA8
PDE12
KNL1
UNC45B
TPD52L2
SETD1A
ABHD16B
UCHL5
RPL26
RO60
PRDM10
GPR89A
SP2
TRIP10
GPR108
FBXO8
CEP44
AFF3
PMVK
KAT6A
ZSWIM4
WWOX
TRMT2A
TRAF3IP3
SMG6
RER1
RANBP1
RALGPS2
PRMT5
PIK3C2A
MORN1
BARHL1
SSBP2
STK17A
LARP4
HHLA2
FAM186A
RUVBL1
KLHDC10
SLC35B1
TBC1D10B
MYLPF
RPL37
REEP6
PCSK4
EPS8
DNAJC24
DCDC1
CASP8AP2
BTN3A2
ATF7IP
TSSC4
NAV1
LARS1
RFX5
MAP1LC3B2
BUB1
RIC1
PHF1
OPA3
HUS1
LOC645177
CD69
C12orf77
PSMD3
OAT
NOTCH1
CCAR2
C8orf58
WDR24
STPG3
NELFB
CEACAM21
ATP5MC1
TRUB2
LAX1
ETV5
COQ4
CDK5RAP3
ATG5
ACTR2
MRPL1
TMEM259
RPL15
NKIRAS1
CNN2
UFC1
TIGIT
DNAJC19
KDM4D
CWC15
ZNF286A
MTOR
ZNF443
RUBCN
PM20D1
NPIPB6
TMCO1
RGS1
NIP7
COG8
TNFRSF19
SNX16
COL23A1
ADAMTSL1
CABCOCO1
CLPB
CCDC200
UNK
H3-3B
CDCA3
FEM1A
H4C11
BOD1
DDX49
COPE
PHF12
SLC8A1
RWDD1
IFRD2
CHMP4B
VPS50
HEPACAM2
FBXL19
AP2S1
PHB
FAP
SP1
NAV3
TCEA2
RAB5B
RAG2
IFTAP
CIC
SUCLG1
H4C2
H3C2
H2BC4
H2AC6
MMACHC
TMEM115
DDX23
MAPKAPK5
NAIF1
ID3
WDPCP
MDH1
ANKHD1-EIF4EBP3
ANKHD1
MRPL24
PAK1IP1
C6orf52
THRAP3
PES1
NEBL
IRF2BP2
PEX14
DFFA
TBL1X
PPP1R12B
MRPL11
ING4
NCLN
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SPAAR
CALR3
C19orf44
PRCC
GSPT1
BANP
ZFYVE1
TSNAXIP1
RANBP10
VIPAS39
AHSA1
SMPD3
PEMT
EHF
RPS7
TOM1L2
DRC3
GALM
RPS20
TSC2
NTHL1
OSBP
TSN
C16orf91
GTF2H4
LRRC29
ST3GAL2
PNKD
AAMP
PNPLA6
INTS9
HMBOX1
ZNF547
TRAPPC2B
HNRNPC
NUP205
TMEM70
ELOC
RPS3
RPL32
SYMPK
FOXA3
PPRC1
LRCH4
FBXO24
INVS
ERP44
ID1
UBQLN4
LAMTOR2
ZNF268
ZNF225
C19orf53
OR4M1
ORMDL3
SCAF1
RRAS
TXNRD1
BUB1B
POLDIP3
GSK3A
CACTIN
ZNF143
SUPV3L1
C1orf159
RANBP2
ZNF165
FASTKD1
OR4Q3
PIN4
PSMD11
NUDCD1
SLC35E2B
FAM168A
NFKBIL1
ATP6V1G2
ZNF17
CCDC146
SIRT4
H4C5
H2BC7
TBL3
TMEM94
NDC80
METTL4
DYNC1I2
ZNF687
ZNF383
GPR137
GATB
SPSB3
NUBP2
UFD1
CDC45
OAZ3
ZNF335
SNX17
EIF2B4
NPRL2
CYB561D2
STT3A
HEXB
TFPT
PRPF31
ZSCAN22
ARID2
STAM
VCPIP1
C8orf44-SGK3
G3BP1
UBAC1
SIRT2
SCRIB
NFKBIB
UFSP2
C4orf47
BMF
SP5
MICOS13
HSD11B1L
CYCS
TSNAX
MRPS7
GGA3
SART3
ISCU
SLC39A1
CRTC2
TIMM21
FBXO15
COMMD9
NR6A1
HRCT1
ZNF608
STIP1
RNASEH2A
PRDX2
DDX39B
NUP107
TNFRSF12A
THOC6
HCFC1R1
TMEM60
PHTF2
TMEM11
VTI1B
COX16
KHDC4
RPIA
ZNF691
LMAN2
CCDC174
ZNF417
TBL1XR1
MRPL53
WDR46
PFDN6
ZNF235
EXOC3L1
E2F4
ZNF444
DSTYK
SUFU
ACTR1A
PIGL
NCOR1
MEIS1
FARSB
UBR2
DDX41
TULP2
NUCB1
NFIB
KBTBD6
CNIH4
PANK4
MED27
HES5
GOSR2
SPHK2
RPL18
FAM83E
TRDMT1
EXOSC5
BCKDHA
ANAPC5
SUPT7L
SLC4A1AP
METTL3
FAM187A
EMILIN1
EFTUD2
CCDC103
SRSF11
LRRC40
TM4SF18
SLX4IP
MKKS
TMTC3
REXO1
CEP290
SEC11C
PSMC5
FTSJ3
ISY1-RAB43
ISY1
VEZT
FGD6
TTI2
HEXIM2
EIF3F
NMT1
DCAKD
PSENEN
LIN37
SMG8
MRPL21
IGHMBP2
NME1
TMEM242
C19orf48
ZSWIM3
ACOT8
PHB2
NUDT13
AHCYL2
HNRNPL
GDE1
CCP110
NPAS4
RNF121
LOC100133315
ATP5F1B
C19orf67
ZNF337
PRICKLE3
ING3
COX7C
RPGRIP1L
FTO
PSMB6
CDK5RAP2
SEC61B
SUGP1
MAU2
TCERG1
VWA5A
GTF3C3
ZFPL1
TMEM262
CDCA5
ZNF576
IRGQ
BUB3
KRT15
ZNF548
NEDD8-MDP1
NEDD8
IPO13
GMPR2
RPS27A
H4C8
CLHC1
MRPL28
CLN3
APOBR
ATG4C
RPS6KB2
ZMAT2
ZBTB45
MRPL30
MITD1
CAND1
NOC4L
EMCN
DDX51
SEL1L
POLR2E
C12orf43
NDUFAF5
ESF1
EMC4
USP17L22
USP17L20
TRAF7
ZC3H10
RPL41
CTU1
CCDC124
KRT23
EXD2
CAPN15
UBC
CTDP1
RPL9
RBL1
LIAS
STK36
RNF25
RARB
ZNF500
SEC13
RPL18A
ZNF776
EXOC4
GSTO2
VPS25
SMARCAL1
PPP1R12C
TRMO
PABPN1
SRD5A1
NSUN2
GUF1
ZNF773
NOP16
HIGD2A
DLGAP1
ZNF140
ZFYVE19
OPRL1
LKAAEAR1
DNAJC17
TMEM160
ATP5MG
SNX1
CIAO2A
CD2BP2
SMAD3
CRADD
MTRF1
STAM2
RCAN1
PDE6D
FBXW11
COPS7B
TRAPPC6B
PNN
ZNF211
DYNC2I2
COPS7A
TLE3
ZCCHC4
SLC39A9
PCBP1
MT2A
ERH
PRORP
PPP2R3C
CENPA
TBP
SSBP3
PSMB1
H3C15
H3C14
H2AC19
H2AC18
PEX2
GET3
FCF1
AREL1
STK25
SLC25A19
NDUFB3
FAM126B
ABT1
ZNF688
JOSD2
ASPDH
WDR97
MAF1
DMAC1
ZNF628
SESN1
CEP57L1
USP48
ZCCHC8
TM9SF4
RABAC1
SHPK
CTNS
ZC3H12A
NDUFB5