ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

WDR74
MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
SNX16
ADAMTSL1
SPATC1L
CABCOCO1
TNFRSF19
MTRNR2L8
COL23A1
SP2
FRG2C
FRG2
H4C14
H4C15
CLPB
MUC3A
KATNB1
DDX23
BOD1
NAV3
SLC8A1
EVI5L
H4C11
VPS50
HEPACAM2
UNK
H3-3B
DNM2
TMEM115
H4C3
H1-6
CCDC200
CHMP4B
CDCA3
TCEA2
DDX49
COPE
IFRD2
RWDD1
SP1
EHF
TBL1X
PHF12
FBXL19
H2BC4
H2AC6
THRAP3
FEM1A
POLR3F
DZANK1
MAPKAPK5
AP2S1
H4C2
H3C2
WDPCP
MDH1
FAP
TSN
ARID5B
IRF2BP2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PAFAH2
GALM
CIC
SCNM1
LYSMD1
TSNAXIP1
RANBP10
PRCC
ST3GAL2
KHSRP
RBBP5
PHB
SUCLG1
YJU2
RPS20
MRPL24
BANP
ID3
NEBL
ARID2
TEPSIN
NDUFAF8
PEX14
DFFA
RFX1
CCDC90B
FAM168A
SMPD3
TSC2
NTHL1
RAG2
IFTAP
PPRC1
OR4M1
CALR3
C19orf44
LRRC29
NUDCD1
NCLN
TOM1L2
DRC3
MMACHC
PAK1IP1
C6orf52
RAB5B
ANKHD1-EIF4EBP3
ANKHD1
PPP1R12B
GSPT1
ZFYVE1
ORMDL3
OR4Q3
HNRNPC
SPSB3
NUBP2
LRCH4
FBXO24
GATB
INVS
ERP44
PES1
COMMD9
SLC25A25
NAIF1
VIPAS39
AHSA1
NDC80
METTL4
MTOR
PEMT
RPS3
ZNF17
CCDC146
COX16
PIGL
NCOR1
ING4
ZNF417
PANK4
HES5
BMF
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
H4C12
SPAAR
HRCT1
ID1
PRR14
TMEM11
PIN4
SP5
SRSF11
LRRC40
C16orf91
PNKD
AAMP
KHDC4
EMILIN1
INTS1
SF3B6
FAM228B
BUB1B
ZNF608
STIP1
NUP107
OSBP
ZNF268
GPR137
DDX41
MED27
GUF1
NOP16
HIGD2A
GSK3A
ZNF547
TRAPPC2B
GBA
TARS2
INTS9
HMBOX1
TACO1
TTI2
DYNC1I2
TULP2
NUCB1
MTRF1
LARS1
TFPT
PRPF31
TBL1XR1
TMEM70
ELOC
CNIH4
TMEM242
ZFPL1
TMEM262
CDCA5
SCAF1
RRAS
SNX17
EIF2B4
NOC4L
DDX51
RCAN1
RPS7
SF3A3
EXOC3L1
E2F4
RABL2A
GTF2H4
RANBP2
ZNF211
PNPLA6
RPL32
SYMPK
FOXA3
ZNF687
CYCS
C19orf53
NUDT13
SLC39A1
CRTC2
TM4SF18
NEDD8-MDP1
NEDD8
GMPR2
ZCCHC4
ZNF165
UBQLN4
LAMTOR2
TSSC4
STAM
PHB2
TBP
SSBP3
PSMB1
TMTC3
CEP290
KBTBD6
ZSWIM3
ACOT8
COX7C
CCNL1
FCF1
AREL1
H4C5
H2BC7
TIMM21
FBXO15
EMC4
STK25
ABT1
NUP205
METTL3
ATG4C
MRPL11
COMMD1
CCT4
TBL3
ZNF337
PSMB6
CAND1
NDUFAF5
ESF1
DMAC1
ZNF628
TNFRSF12A
THOC6
HCFC1R1
BUB3
ZNF225
WDR46
PFDN6
SEC11C
SMG8
MRPL30
MITD1
ZCCHC8
NDUFS3
KBTBD4
NUF2
MICOS13
HSD11B1L
NR6A1
TCERG1
RPS6KB2
NFKBIL1
ATP6V1G2
DDX39B
MRPL53
MRPL28
TMEM107
OAZ3
TRIP10
GPR108
SSBP2
SHPK
CTNS
ZC3H12A
NDUFB5
MRPL47
SLC35E2B
MEIS1
NFIB
SPHK2
RPL18
FAM83E
PSENEN
LIN37
GTF3C3
KRT15
RHOT2
GSTO2
SMARCAL1
TOR1AIP2
TOR1AIP1
ANAPC5
PSMD11
VWA5A
ZFYVE19
DNAJC17
HEMK1
C3orf18
ZNF383
NPRL2
CYB561D2
ATP5F1B
C12orf43
ATP5MG
ZSCAN22
HDAC9
UBAC1
RPL14
SIRT4
AK2
SUFU
ACTR1A
GOSR2
ZMAT2
VRK1
TRDMT1
ZNF140
TATDN3
NSL1
CTU1
PPP1R12C
UFD1
CDC45
PSMC5
FTSJ3
POLDIP3
PRRG2
NOSIP
UBR2
VPS25
TMEM94
STT3A
NLK
PSPN
ALKBH7
SEL1L
CCDC174
SMARCD2
SLX4IP
MKKS
ATP6V1G1
FARSB
AHCYL2
PEX3
CA11
ADAT2
SSR3
SIRT2
NFKBIB
UFSP2
C4orf47
ZNF444
CDK5RAP2
RPL37
ZNF286A
KCTD5
MRPS7
GGA3
C1orf159
VCPIP1
C8orf44-SGK3
PTDSS2
LSG1
CRADD
FAM187A
EFTUD2
CCDC103
TIMMDC1
NMT1
DCAKD
SEC13
FASTKD1
HEXIM2
SUGP1
MAU2
G3BP1
TMEM60
PHTF2
CLN3
APOBR
TRAPPC3
HEXA
ZNF691
KRT23
ZNF773
ARHGEF1
TLE3
ZNF548
RARB
LMAN2
POM121
AURKAIP1
CCAR2
C8orf58
HEXB
FLAD1
BAHCC1
EXD2
CD2BP2
MT2A
TSNAX
ZC3H10
RPL41
UBC
ZNF500
PDE6D
COPS7B
RPIA
NME1
ZNF776
COX7A2L
TBC1D10B
MYLPF
BABAM1
SMAD3
COPS7A
VEZT
FGD6
DLGAP1
C19orf67
RPL18A
ZNF420
ZNF143
SART3
ISCU
FBXW11
SUPT7L
SLC4A1AP
EMCN
TRAF7
RBM25
ZNF335
KRR1
SNX15
SUPV3L1
METTL26
SNX1
CIAO2A
ZNF226
LTN1
TXNRD1
CACTIN
H4C8
PITX3
GBF1
SLC35B1
MRPL20
EIF3F
PWWP2A
TMEM63C
SCRIB
EXOC4
NBPF15
RNF121
LOC100133315
DYNC2I2
CTDP1
PEX2
ZNF688
EXOSC6
EIF2AK3
ZNF235
TXNL4B
DHX38
MRPL21
IGHMBP2
SECISBP2
METTL25
CCDC59
ZBTB45
SCYL3
PABPN1
THYN1
ACAD8
SRD5A1
NSUN2
NTMT1
C9orf50
RPGRIP1L
FTO
CCDC124
UTP3
SULT2B1
DHX8
EXOSC5
BCKDHA
RGPD2
RGPD1
MTRNR2L9
FRMPD4
RNASEH2A
PRDX2
VTI1B
MAMDC2
ZBTB38
DSTYK
REXO1
ISY1-RAB43
ISY1
RAB11B
SSBP1
C19orf48
HNRNPL
GDE1
CCP110
NPAS4
MTRNR2L10
NDUFS7
EMILIN2
PRICKLE3
ING3
SEC61B
UBE2I
ZNF576
IRGQ
PCM1
IPO13
RPS27A
CLHC1
POLR2E
USP17L22
USP17L20
HNRNPUL1
CAPN15
SLC25A20
RPL9
RBL1
LIAS
STK36
RNF25
PHF19
FNDC3A
TRMO
TRIP4
PPP6R1
PPP5D1
CALM3
OPRL1
LKAAEAR1
TMEM160
AP2M1
TOP2A
EPS15
STAM2
IARS2
BPNT1
TRAPPC6B
PNN
CCL3
SYT7
SLC39A9
PCBP1
ERH
RPAIN
PRORP
PPP2R3C
NUP88
CENPA
H3C15
H3C14
H2AC19
H2AC18
INO80C
GET3
SLC25A19
NDUFB3
FAM126B
H4C4
USP30
JOSD2
CSDE1
ASPDH
WDR97
MAF1
TMEM109
BRWD1
SESN1
CEP57L1
USP48
TM9SF4
RPL35A
IQCG
RABAC1
GLIPR1L1
CAPS2
RPL27
TRAPPC9
PTEN
KLLN
INTS10
UBE2J1
PNISR
MRPS23
SF3B3
COG4
MYOM2
GABPB2
XAB2
PCP2
PMF1-BGLAP
PMF1
GORAB
ARHGAP17
TJP3
NR1H3
HSPA9
ACP2
SREK1IP1
CWC27
ZSCAN5A
SIX1
PNKP
COMMD2
CDCA8
C1orf109
ARHGEF2
NVL
BMERB1
UTP11
ENPP4
CLIC5
LTA4H
KLHL29
TOMM40L
DENND1B
APOA2
ALKBH3
KLF2
PROSER3
HSPB6
TRIM55
ATP2C1
STX16
TPRKB
XPNPEP3
ST13
KLF6
FUT10
TEKT2
ADPRS
MRPS18C
HELQ
RAP2B
HBP1
C1orf198
NGB
GCLC
LNPEP
MDM2
MCAT
ABCF2-H2BE1
ABCF2
ADO
SCT
CDHR5
ACTL6A
ZNF56
RUFY3
RTRAF
RTF2
PEX26
PEAK1
HMG20A
CXCR5
CCL5
CCDC39
TMEM256
NLGN2
TTC33
TGIF1
MDM4
SMCO1
ZPBP2
IKZF3
NCOA7
MNT
KAT6B
SNRPB
VPS52
RPS18
ILF2
NUP153
NDUFC2-KCTD14
NDUFC2
NAT16
HCAR3
CHST12
RIIAD1
MAP2K3
KDM6B
IRF2BPL
CELF3
ANP32C
KMT2C
EML2
DPP9
BTRC
POLG
PARP2
LAMP1
FGG
CRYAA
CRYAA2
RGS8
MACC1
DHX33
AP1G1
ZNF384
SKA2
PRR11
PHC2
KANSL3
ID2
FER1L5
TJP1
MRPL1
DCP1B
UBE2H
DRAP1
C11orf68
PXMP2
POLE
LOC102723996
ICOSLG
USP3
COPS8
CCM2
RPS13
LAS1L
HSD11B1
CDYL
CDC20
PSMD4
OR6B2
NDUFA10
MED23
LIME1
WHAMM
FSD2
TRIM48
STMN3
RTEL1
FMO4
CWC25
TP63
TMEM79
SMG5
RBM42
MARS1
BBX
ARHGAP9
UBB
FOXK1
FAAP24
CEP89
RPS23
LEFTY2
CMSS1
ATP6AP1L
WDR83OS
WDR83
MAN2B1
HOOK1
FDPS
AQR
RAD51AP2
MRPL44
C2orf42
ZNF565
ZNF146
TPST1
TMEM143
SYNGR4
RAD51AP1
FAM156B
FAM156A
C16orf72
C12orf4
ZNF552
WBP1L
WAPL
SELENOH
GEMIN6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NFATC2IP
SPC25
INSR
FOS
SATB1
SAP30BP
RECQL5
KDSR
IER3
FLOT1
CSNK1G3
CCR2
CRB1
ZC3H6
SPTLC3
NCDN
KIF16B
KIAA0319L
EIF4A1
CDK8
ZNF749
ZNF584
TIMM22
RPL29
PTMA
PHF23
LRRC14B
DVL2
WBP2
RANGAP1
PRPF18
MAMSTR
FOXP2
ZNF419
SLC33A1
PRPF19
NR1H2
CCDC77
TBCK
STAP2
SART1
MPND
DPEP3
AIMP1
PSMD1
MED6
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
ERVMER34-1
EPYC
COPZ1
CGGBP1
CCL3L3
CCL3L1
C3orf38
ATXN2L
ZNF451
TYK2
RBM28
ZNF609
TLR5
IFI44L
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
MYCBP2
MPV17L2
EPRS1
CSTF1
AURKA
GABARAP
DHX16
CLEC7A
NPIPB5
NDUFA2
MTR
IK
CHD6
SLMAP
SLIRP
FBXW9
BIN2
ALKBH1
ZSWIM1
UNC93B1
RAB40B
NDUFAB1
HIRIP3
HAX1
ECT2
CRYBB1
TAF6
SLC9A1
OXCT2
MAPKAPK2
KLHL20
IDH3B
CNPY4
ASB4
ASAP1
PLCD3
DMAP1
ATG9B
ARNTL
ACBD4
ABCB8
TDRKH
PPIL3
NIF3L1
MTBP
MRPL13
IER5L
ASXL1
SMARCA4
RPS12
IFIT1
TPCN1
TAOK3
SUDS3
RPL21
NMNAT1
MGP
LZIC
TSC1
SH3RF2
PSAP
MYEOV
MTFR2
GFI1B
CEP128
AMOTL2
UBQLN1
TOMM40
MACIR
UQCRC2
TUT1
SCAMP4
MYNN
EMX1
CLPTM1L
ADAT3
ACTRT3
ZNRF3
ZNF668
ZNF646
SH3GL1
SACS
P2RY10
OCSTAMP
DAPK3
CWC22
CHAF1A
TMED10
TCF3
NXNL2
NSMCE3
GFM2
FAM207A
CSTB
TFB2M
GCG
CYP2R1
CNST
CCDC61
RFC4
PTBP1
KRI1