ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15039985 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◣ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L1
MTRNR2L8
MTRNR2L2
MSH3
DHFR
LOC102724770
DGCR6
DUX4
ACTRT3
MYNN
ARL4D
MTRNR2L9
MAMDC2
ZFP36L1
TIPARP
ZNF335
VPS37D
RGPD2
RGPD1
NLRX1
UEVLD
CCDC200
SORBS1
TP53I11
KRT36
KRT13
SNX16
SLC29A3
C1orf198
UBFD1
EARS2
VARS2
GTF2H4
AHCY
TOR1A
OSCAR
NDUFA3
SWSAP1
EPOR
SIRT5
WDR74
STX5
EIF3C
EIF3CL
SOGA1
AP2A2
ATG16L1
SETD1A
ORAI3
GADD45B
UBE2L3
MRPL39
MAPK11
RAPGEF1
ARPC3
NCAM2
UBE2V2
SPATC1L
CLPB
ZDHHC12
ZCCHC14
DTD1
TOP1
RAC1
DCDC2
KAAG1
KXD1
TCTN3
CABLES2
RNF24
PRRT3
RIPK1
CACTIN
TMC8
TMC6
C17orf99
TFAM
SPATA2
RIOX1
TERF2
NSFL1C
PIGBOS1
PIGB
MLLT1
SLC25A20
CSF3R
CHST12
MRPL45
PIH1D1
ALDH16A1
TNNI3
DNAAF3
PRR5L
COMMD9
B4GALNT3
EI24
KIF16B
RPS29
HPS1
ILDR1
MKNK2
MTHFSD
HPS6
ARMH3
PRMT5
NPR1
ILF2
PLXNA1
CYRIB
C1QTNF8
GDF7
SGSM1
KANK2
SRCIN1
CERCAM
DRG2
HOOK1
UBOX5
FASTKD5
NEMF
CORO1C
SCARB1
FAM161B
COQ6
LTA4H
TCIRG1
NDUFS8
MCAM
ZDHHC24
ACTN3
FXN
CEP164
GPR160
POLR2K
FBXO43
UBXN4
ADRM1
CNOT3
KCNK5
BRAP
ACAD10
RBM4B
GSTA4
TMEM41A
AMZ1
RFX1
CDCA4
CLK3
MICALL2
TJP3
RPL6
PTPN11
PIP5K1C
SMCO4
GRK6
CKM
METTL14
FAM193B
GPCPD1
MELTF
RBBP8NL
SPOCD1
RPL13
CPNE7
PMF1-BGLAP
PMF1
RAB2A
ZER1
PEX26
SMARCD2
SLC25A16
EFR3A
UIMC1
EPOP
MUC20
NEFH
NUCKS1
TNS4
YBEY
MCM3AP
TAF1C
ADAD2
PSMA3
NUDT14
TP63
PDCL
NCOA7
LARP1
ID1
ADSS1
ZNF131
RDH13
NXPH3
WDR25
WARS1
PSMD9
HPD
POLR2G
ZBTB3
SRXN1
KIAA0895
ANLN
MLEC
ZFAND4
BNIP5
SLC27A4
YEATS2
PRR5-ARHGAP8
PRR5
LBHD2
MOK
PRMT1
ENSA
GADD45GIP1
UTP6
MLX
HSD17B1
COASY
TRMT1
NACC1
RS1
PPEF1
MFRP
C1QTNF5
RNF26
DYM
DDHD2
TDRD7
SYT11
GON4L
HMGN4
CLTB
RAB5C
NEDD1
TMEM19
GALNT10
ITGA3
MAP1LC3B
FBXO31
TMEM229B
GTF2H5
ZNF234
YAF2
SEC22B
RNF216
ARNT
CTXND2
TOMM34
STK4
PRX
PRRC2B
MDM4
USP35
KCTD21
RASGRP1
GSC
NEK6
TTC38
PKDREJ
STRN3
AP4S1
ATP2C2
POLG
PDK2
GPRIN2
SLC9A8
FRG2C
GOLGA7B
CASTOR1
PHLDA2
RABGEF1
RAB4B
MIA
TMBIM1
POFUT1
PLAGL2
ACTL6A
ATG9B
ABCB8
LDLRAP1
PUS7L
IRAK4
RAB3IL1
FRG2
CCNT1
KDSR
GEMIN6
HSPA6
SNX11
CBX1
PLXDC1
PPID
COPS4
GNG7
KLF8
LSM5
AVL9
MEX3C
MPZL1
METAP2
RILP
TTYH3
ISOC2
KIF26A
PDLIM1
DPP9
BSND
EP400
BMP4
FLOT2
DHRS13
SPAG4
NCOA6
COX5A
C12orf43
CD79A
ARHGEF1
NARS1
PLD4
ARHGAP39
IFNGR2
AHSG
PIGR
BCAR3
INF2
RPS10-NUDT3
RPS10
OAS2
MIDEAS
DIO1
ATP5MC1
ATP6V0E1
SNRNP35
DUSP1
ICMT
HES3
SAMD8
DUSP13
MEGF9
LFNG
RNF114
LRRC37A3
CDT1
APRT
CRLF3
ATAD5
SPATS2
RPS12
FEM1A
PDRG1
TKT
SMG8
ERCC1
GPSM2
GK5
LMAN1L
PC
LSM14B
ZFAND1
SSH1
ZSWIM4
WFDC3
DNTTIP1
TENT2
NELFCD
PRR30
PREB
HES7
ALOXE3
NDE1
MARF1
PNMT
PNPLA6
ZNF343
LTO1
PDLIM7
TRIM41
RHOD
RHOF
PGPEP1
SCN8A
CUTC
COX15
OAS3
TMEM44
ZSCAN1
ELAVL3
TBC1D31
FRMD4A
LCN12
FBXW5
C8G
NOM1
RAD21L1
AARS2
RAB11B
SOS2
UBE2I
SLC35A5
ATG3
PTPN21
ZC3H14
PHLDB1
NDUFS7
MRPL35
IMMT
SLC35B1
PMEPA1
FBXL18
SLC29A2
C15orf48
AQP2
CAMK2N1
ERICH4
DMAC2
MRPS17
RAB15
DDB2
NEK7
CARM1
AARSD1
HM13
ARHGAP27
RNF168
CCDC22
CACNA1F
SREBF1
PPP1R9B
VCL
NDUFA12
EPS15
SCGB1C2
SCGB1C1
ODF3
RPUSD2
CCDC32
C3orf33
ZNF629
FKBP9
LGI1
TIA1
PCYOX1
SRPK1
CLUAP1
C16orf90
HECTD4
SMTN
TP53RK
SLC13A3
SH3GLB2
MIGA2
RRBP1
RFT1
DEFB116
CORO6
UNC93B1
ALDH3B1
KTN1
LZTS3
TBX10
NUDT8
C16orf95
CBLC
ECPAS
COMMD2
FBN3
SHMT2
NDUFA4L2
CCR7
ZNF77
RPS14
PSMD4
TIMM22
PXMP4
JRK
NAE1
PPP6R3
RBM17
TMEM214
SUOX
TSPAN10
NPLOC4
SEMA6B
TRABD
BRMS1L
KCNK15
HUNK
LY6L
TSACC
CCT3
SMN2
SMN1
NIPA1
NIPA2
PRIM1
HSD17B6
ECSIT
CNN1
PITPNA
BANP
MOB3A
IZUMO4
TSNAXIP1
POLR3E
ELL
PIGZ
STX16
TPCN1
IQCD
CARD14
FCHO1
WDR43
PTPRA
DHX16
NMNAT1
LZIC
POMK
TCTEX1D2
KCNJ1
ZNF555
NR2F6
PYCR3
GFUS
KRT83
C19orf25
H6PD
SLC26A8
MAPK14
VARS1
BTBD6
BRF1
SYNJ2
ZNF285
BDH1
SLC25A45
FRMD8
ELF2
GMFB
PDCD4
EEF1AKMT2
ABRAXAS2
NOL10
RPS15
APC2
PI4K2A
MORN4
C5AR2
GLI4
LAMTOR4
MAP11
GAL3ST4
ATMIN
SETX
GPAM
EEF2
STAT2
APOF
SKIL
BRMS1
H2BC17
H2AC17
OR2B2
B4GAT1
ZYX
FAM131B
TOMM20L
TRPM4
HRC
SLC2A10
MAP1LC3B2
DNAAF4
TMUB2
PIEZO1
CTR9
SDC4
SHISAL2A
LY6G6F-LY6G6D
LY6G6F
ABHD16A
CBX7
PMS2
AIMP2
ZNF276
VPS9D1
DOCK7
ERBB4
ADRA2A
OSGIN1
SNU13
ZNF500
LIPH
ABT1
LPAR2
ABCC5
WDR89
AVPI1
FOXK2
CDK5RAP1
NRROS
SLC35F2
SMU1
MRGBP
OGFR
TIMM9
KIAA0586
VKORC1
PRSS53
ZNF713
FUT10
TMEM134
TMEM51
VAT1
RND2
PACSIN3
ARFGAP2
TRIM16L
CCDC71L
HCFC2
GLT8D2
IQCE
SLC51A
POC5
CHAD
ZNF860
OSBPL10
FNDC3B
WNT4
MAX
MEGF8
SMARCC2
INKA2
PRXL2A
KHDRBS3
PCDH1
CYTH1
MARCHF8
UTP25
CIZ1
ZNF3
COPS6
SNX3
CASKIN1
SLIRP
ALKBH1
WFIKKN1
METTL26
MCRIP2
TLE6
ECM1
SLC25A39
PCYT1A
CUEDC2
SCAF11
KIF2C
TNFAIP8L1
RAB8A
NDUFAB1
IL1RAP
H4C8
AP3M2
AHNAK2
TRIM16
ESR2
PAK4
CPPED1
TM4SF19
RBM12B
CFAP157
PYROXD2
TTC16
PTRH1
SIT1
CCDC107
ARHGEF39
ATP6V0E2
WNT7B
ECE1
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
ESCO1
TMPRSS13
CCNY
USH1G
OTOP2
ACER1
MRPL54
APBA3
SARS2
MRPS12
MARS1
ARHGAP9
IQSEC1
ZNF843
GASK1B
LAMP3
MMP28
TMEM62
CHMP6
COX16
MUC1
EPN3
MAFA
FOXN3
OLFML2A
NR6A1
ATF6
SLC38A10
DSCC1
RPN2
MROH8
NTAN1
MRAS
MMP17
SLC19A1
ZNF34
RPL8
KANSL2
PRICKLE1
INSM1
SHFL
MLXIPL
MFAP4
MAPK7
B9D1
GTF2IRD2
MACROD1
HELLS
TDRD5
FAM83G
RRP12
DEF8
PSMB3
PCGF2
STARD3NL
TIMM17A
LMOD1
CCDC42
SUSD3
MVD
TP53AIP1
ZNF503
SNX4
SLC30A6
EEF2K
ADAMTSL5
USP13
PTPN1
EIF5A2
ARAP1
SMNDC1
TMEM221
STAT5A
RFLNA
AURKAIP1
RTKN
KDM2B
TRADD
FBXL8
ELK3
HSF4
NOL3
XXYLT1
CTSO
ST6GALNAC6
PRDM11
ASPSCR1
NOTUM
KRTAP10-5
KRTAP10-4
EMID1
ZNF517
TMEM160
VPS8
PITX3
ELOVL3
KCNN1
KNL1
PPP5D1
CALM3
EBI3
TCP11L1
ZFP64
SRGN
DRAM1
HPS3
ZNF184
LOC400499
METTL25
CCDC59
RND1
ZBTB34
IL12A
PPP2R2A
TRIM59
HDHD5
ANKRD9
NFATC2
PSMD2
FBXW4
TNFRSF14
ZNF638
SLC44A2
LMTK3
NOP14
GRK4
CBX4
COX6A1
HERC2
GPER1
HBS1L
RRP1B
HSF2BP
BBS1
NMRAL1
HMOX2
SIVA1
SUGP2
ARMC6
ZNF600
TBX1
MARVELD1
EMC4
ANTKMT
RNF187
HAGHL
CCDC78
CDC25B
CENPB
SLC25A44
COL18A1
ZSCAN10
RASAL3
ANKLE2
SLC11A2
NECAB3
TCF12
ACTL10
PPP1R15A
PLEKHA4
MAPRE1
BRSK1
GRPEL2
PWP2
LOC102724159
PLA2G3
INPP5J
BHLHA9
GOT1
GNPTAB
ZNF736
TARS2
ATP13A3
DOLPP1
MAFK
SEC62
TMEM211
ZNF839
NPIPB9
CCDC88C
TMEM200B
KLHL8
NPTX1
ZBTB38
HOMEZ
LDLRAD1
SYNPO
LIPA
CCR4
UNCX
HLA-E
GLIS2
SLC35E2A
MFSD4B
ABHD3
JAGN1
CIDEC
VIPR1
PHKB
ITFG1
RCN1
FLCN
METTL22
INTS8
GGT1
GINS2
ANKRD18B
SH2D4B
PRDM6
MCM7
AP4M1
PLK3
LCN8
LCN6
LIMD1
INPPL1
FOLR2
NAA20
HOGA1
ANKRD2
LCN15
CDKN3
GCH1
NMNAT3
BEST4
MBD3L2B
CHRNA5
FKBPL
ATF6B
HIBADH
GP9
ACOT6
SPDYA
RAB11FIP1
KCNB1
TRMT10A
MTTP
KIF3B
SVBP
ERMAP
HLA-C
ARHGEF5
UROS
BCCIP
PLLP
ATP5IF1
FABP6
GSAP
ACTA2
DIP2C-AS1
NCOA2
MPP3
CD300LG
LTBP1
ADCY6
TRAF6
RAG1
CIRBP
NXN
GABBR1
POMZP3
SPOP
FBXO27
TRIM26
VPS53
FAM43A
PIK3CA
PCNX1
CAMK1D
SLC4A8
GALNT6
MLLT6
PCDHA4
PCDHA3
PCDHA2
TIAM1
PHF3
PDE4A
TK1
AFMID
TPK1
RALGDS
ADAM15
GPR84
TADA1
CENPN
PPIL3
NIF3L1
TRIM32
ASTN2
H4C9
H2BC12
H2AC12
SRMS
OLFM2
ZSWIM1
SPATA25
NEURL2
CTSA
PTK6
DEPTOR
ADRA2B
ABCA1
ISG15
AGRN
KLF9
TBC1D12
LIMA1
ZFAND2A
AUTS2
CRYBG1
HDAC5
KDELR3
KCNJ4
MEIOB
NPIPA3
NPIPA2
PLA2G10
GM2A