ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15039983 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◣ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L1
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MAMDC2
ACTRT3
MYNN
VPS37D
DUX4
SORBS1
NLRX1
ZNF335
ARL4D
LOC102724770
DGCR6
UEVLD
TOR1A
UBE2V2
ZDHHC12
MTRNR2L9
CLPB
ZCCHC14
CEP164
RGPD2
RGPD1
UBFD1
EARS2
TP53I11
VARS2
GTF2H4
TIPARP
RIOX1
SGSM1
EIF3C
EIF3CL
EI24
WDR74
STX5
ZFP36L1
TERF2
AHCY
RAC1
CCDC200
SMCO4
MRPL45
HOOK1
MRPL39
FRG2C
LTO1
CYRIB
SLC25A20
UBE2L3
RNF24
POLR2K
FBXO43
PDCL
ZER1
MLX
HSD17B1
COASY
MLLT1
RFX1
GADD45B
B4GALNT3
PRRT3
MTHFSD
NCAM2
KRT36
KRT13
SIRT5
PRMT5
LCN12
FBXW5
C8G
OSCAR
NDUFA3
ATG16L1
GTF2H5
ARNT
CTXND2
CABLES2
SLC25A16
HPS6
ARMH3
SPATC1L
TAF1C
ADAD2
RBM4B
PEX26
ICMT
HES3
ARPC3
DTD1
METTL14
CACTIN
NUCKS1
SRXN1
PLXNA1
ATF6
RIPK1
ZNF131
SWSAP1
EPOR
DCDC2
KAAG1
RAB2A
SLC29A3
POLR2G
ZBTB3
PSMD9
HPD
UIMC1
ACTL6A
PIGBOS1
PIGB
EFR3A
KXD1
AP2A2
BANP
ILDR1
FXN
KIF16B
CHST12
GNG7
METAP2
SETD1A
ORAI3
TENT2
SRCIN1
DNAAF4
PRMT1
ADRM1
PRR5L
COMMD9
TMC8
TMC6
C17orf99
ITGA3
FAM161B
COQ6
UBOX5
FASTKD5
TOP1
GPCPD1
SRPK1
RPL6
PTPN11
TSACC
CCT3
CCNT1
TEX49
GADD45GIP1
LSM5
AVL9
HPS1
NXPH3
MELTF
GALNT10
PPP6C
SNX16
TFAM
SOGA1
CDCA4
MAFK
BDH1
TNNI3
DNAAF3
RDH13
TRIM41
AMZ1
SPATA2
NPR1
ILF2
SNU13
CKM
KLF8
CCDC22
CACNA1F
SPOCD1
COPS4
KTN1
MTMR14
RAB15
RPS29
PCCB
COX5A
C16orf95
VKORC1
PRSS53
MICALL2
SH3PXD2B
SLC35F2
RABGEF1
RAPGEF1
KDM3B
GNE
ZDHHC24
ACTN3
MRGBP
OGFR
KIAA0895
ANLN
CD79A
ARHGEF1
BRAP
ACAD10
ATP5MC1
MACROD1
TKT
YBEY
MCM3AP
MEGF9
GRK6
PDLIM7
CORO1C
ACOT9
DDB2
CSF3R
FAM193B
MFRP
C1QTNF5
RNF26
AARSD1
USP35
KCTD21
C1orf198
TMBIM1
TJP3
ZNF843
MRAS
C15orf48
CLUAP1
C16orf90
ARHGAP39
EIF2D
COL23A1
CHMP6
GK5
SUOX
TMEM229B
MAPRE1
RAB5C
LBHD2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
CDT1
APRT
SCAMP4
ADAT3
CLTB
ISOC2
KANK2
TTC38
PKDREJ
ABCA1
GINS2
EAPP
SEC22B
SMU1
TCIRG1
NDUFS8
SETX
CLK3
ATP6V0E1
EPS15
RHOF
PUS7L
IRAK4
RNF168
NCOA2
GPRIN2
SLC27A4
C19orf25
MCAM
SPC24
RHBDF1
MPG
CERCAM
FBN3
TMEM19
RILP
ZNF860
OSBPL10
BRMS1
DHX16
B4GAT1
PIGZ
C5AR2
TARS2
SYNJ2
SMTN
GPR160
ENSA
UQCRC1
PAK4
DUSP1
KMT5A
AP3B1
NARS1
TMEM51
CARD14
PDCL3
EPN3
GOLGA7B
GPSM2
C9orf40
TOP1MT
RHPN1
CAMK2N1
LSM14B
RNF114
C3orf33
KDSR
TMEM214
OLFML2A
NR6A1
NEMF
PTPN21
PIGU
ZC3H14
ZNF713
ZNF500
TSNAXIP1
PISD
RAB3IL1
PIH1D1
ALDH16A1
TTYH3
BCL9L
PRR5-ARHGAP8
PRR5
AARS2
ZNF3
COPS6
LMAN1L
MDM4
AKNA
POMK
TMEM41A
ACOT6
SLC25A44
MKNK2
TCTN3
TMEM134
TRAPPC6B
PNN
EXD1
CHP1
NOM1
CCDC88C
MUS81
CFL1
MAPK11
TNS4
DEF8
ECM1
FADD
CIZ1
KHDRBS3
SNX11
CBX1
NFILZ
PMS2
AIMP2
SLIRP
ALKBH1
MRPL35
IMMT
ZFAND1
TDRD7
PSMD4
RHOD
PANK3
GSE1
NPAS4
NCOA6
PKN3
LARP1
ZFAND4
LRRC37A3
ELK3
OSGIN1
MOK
MAP1LC3B
FBXO31
SPDYA
CETP
SCML1
EPOP
SH3GLB2
MIGA2
NIPA1
NEK7
MRPL42
ZBTB43
DENR
SEMA6B
PRX
RPS6
FAM83D
MARS1
ARHGAP9
MEX3C
RBM12B
SLC12A6
NUTM1
NOP10
NPIPA3
NPIPA2
PLA2G10
DIO1
PDLIM1
MRPS17
CDK20
PITPNA
RPS12
PIP5K1C
FIS1
CPPED1
DAGLB
ZNF555
TP53RK
SLC13A3
ROBO3
LRCH3
YEATS2
ZSCAN10
RBM17
ATP2C2
GASK1B
ZNF638
VCL
UTP6
LIMD1
GINS4
NSMCE1
ABHD3
SLC25A45
FRMD8
ZNF718
DNAJC30
BUD23
MEGF8
TCP11L1
ASRGL1
MEIOB
ALDH3B2
HEXB
BNIP5
NRROS
CCDC71L
ADSS1
NDE1
MARF1
TSPAN10
NPLOC4
SAMD8
DUSP13
GTF2A2
HECTD4
BTBD6
BRF1
FAM169B
KLC2
RNF216
DYM
PLA2G3
INPP5J
RBBP8NL
SIRT4
AHSG
KCTD5
SRA1
SLC35A4
APBB3
LIMS1
PKMYT1
ATG9B
ABCB8
GLIPR1L1
CAPS2
FNDC3B
DRG2
CCR7
CASTOR1
SMN2
SMN1
C4orf48
CDYL
PIGR
CCZ1
NPIPB6
SLC30A6
ZNF77
SREBF1
PRDM11
SLC29A2
TEX12
SMIM24
BCO2
TP53AIP1
SCRN1
FRG2
GRPEL2
FBXL18
HDHD3
CDC25B
CENPB
RAB8A
FEM1A
TPRA1
CCZ1B
NUDT14
KIAA0513
C1QTNF8
SMARCC1
PPP5D1
CALM3
MMP17
PDCD6
IFNGR2
NEDD1
AMZ2
DDHD2
FOS
TLE6
H1-2
ARHGEF11
STX16
TOMM34
STK4
RGS14
PCGF6
RRP12
COMMD2
MCIDAS
CCNO
MEF2D
PPP2R2A
HUS1
TRAF6
RAG1
FAAH
SH2B1
GLIPR1L2
NSFL1C
SMNDC1
RAPGEF3
DVL3
SLC26A8
MAPK14
PGPEP1
SSH1
MSRB1
NPIPB9
SDC4
TIMM22
ARHGEF3
ZNF256
RND1
RGS9
KNL1
FBXW8
MYO1D
RASAL3
MAFA
UBXN4
GEMIN6
UROS
BCCIP
TADA1
WIPI2
PMM1
UBE2I
CEBPD
AKR1B15
ATE1
MLXIPL
PCYT1A
KLF9
TAP1
PSMB9
SCGB1C2
SCGB1C1
ODF3
TRIM32
ASTN2
SPATS2
SUSD3
ZNHIT2
TM7SF2
MRPL49
FAU
SMARCD2
JRK
TRIM65
MRPL38
RPL37A
SYNPO
CTR9
CBX4
RBM25
ARAP1
PACSIN3
KCNK5
STK38L
FAM83G
PHKB
ITFG1
SYT11
GON4L
TK1
AFMID
AURKAIP1
EHF
PDP2
TMX2
MED19
MUC20
BAIAP2
HDHD5
SHBG
FXR2
TRMT1
NACC1
LDLRAP1
EGR1
RCE1
PHF19
FZD9
CDKN3
CPNE2
ZNF184
ZNF764
PSMA3
ARSD
AHNAK2
STARD3NL
SNUPN
METTL27
SPIRE2
ECPAS
LHX2
KIF2C
NEK6
UBE2Q1
CHRNB2
CASKIN1
PC
HELLS
ZNF250
DLG1
TIMM9
KIAA0586
ZNF234
H6PD
MPZL1
RS1
PPEF1
INTS5
GANAB
PNMT
ARAF
DNAJC5B
XK
USP42
EHD2
MRPS10
CSRNP1
STX3
SLC35B1
ADNP
C8orf76
TRIM16L
INTS8
XXYLT1
POLR2J2
PLD4
SEMA6A
NFRKB
F2
ANTKMT
METRN
PCOLCE
MOSPD3
FBXL16
POC5
NBN
LTBP2
MRPS2
C9orf116
MED23
IL1RAP
RPS10-NUDT3
RPS10
NUMA1
LRTOMT
MUC1
SAMD10
MSL1
PRPF6
HLCS
TMEM161A
RIPOR3
SLC66A3
BSND
ARHGAP27
ACTA2
ZNF268
SPTLC2
POU2F3
INHBA
MED1
CDK12
CNOT3
DYNC2I1
EBI3
PKLR
FDPS
ZNF34
RPL8
CBLC
SCGB1A1
PRRG4
HEXIM1
S100A13
S100A1
CHTOP
TDRD5
ECSIT
CNN1
DOT1L
ZNF582
AP3D1
AUTS2
NDUFS7
SMG8
DPP9
ZSCAN25
SCN8A
NRXN2
SLC25A21
DPH7
MED9
FOXK2
SLC38A10
MRPL54
APBA3
POFUT1
PLAGL2
STRN3
AP4S1
PCBD2
RPL13
INF2
CPNE7
ABT1
TMPRSS9
PPID
GPR37L1
CLYBL
CUL5
BARX2
VARS1
ZNF579
CDK11B
CDK11A
ROM1
EML3
B3GAT3
RAB11B
ZNF551
HIBADH
ZSWIM4
PHACTR4
NDUFC2-KCTD14
NDUFC2
CTPS1
ZW10
CLDN25
SP6
SCRN2
PAIP1
CCDC187
EMC4
ZYX
FAM131B
TOR1AIP2
AP3M2
PYROXD2
TMEM67
IL12A
SCARB1
TRIM59
NMNAT1
LZIC
NEU1
WDR31
BSPRY
EP400
ABCD4
UNC93B1
ALDH3B1
SLC44A2
LRP5
TRPM6
FUT7
C9orf139
ABCA2
FAM43A
WDR25
WARS1
PSMD2
POLE2
KLHDC1
KMT2A
OVOL1
AP5B1
WWC1
PFKFB3
AGPAT2
WDR43
GLIS2
TPCN1
IQCD
TSC1
GFI1B
PPP1R9B
FUT10
LIPH
METTL22
UXT
ELK1
GNA11
CPSF4L
CHAD
MLEC
SOX2
SLC2A6
LETMD1
GNB4
CAPZB
PDE4A
GSTA4
LZTS3
MOB3A
IZUMO4
CBFA2T2
MEFV
DPY19L4
RPN2
MROH8
TATDN1
NDUFB9
RARS1
SLC22A4
CSPP1
COPS5
BACE2
MFN1
ZNF285
DPY19L1
SLC35A5
ATG3
NMRAL1
HMOX2
NACA
SHLD2
GLUD1
PIEZO1
TRDMT1
GNPTAB
LFNG
FXYD5
SLC25A39
IL12RB1
MAST3
TRADD
FBXL8
HSF4
ATMIN
PSMB7
ELAVL1
NOL3
RAB35
TMEM44
HAGHL
CCDC78
TRIM69
ST3GAL5
SIVA1
CLPP
NUP85
FKTN
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
PYCR3
GFUS
PDGFB
ZNF276
VPS9D1
LYRM7
HINT1
TRPM4
HRC
CRYBG1
TMEM116
MFSD4A
MAN2A2
ERP29
ACAP2
CST6
MCM7
AP4M1
EIF1AD
BANF1
STX18
USP13
CRH
ZNF724
EEF2
SPRYD4
PLVAP
MIP
CCDC125
ERCC1
ATF3
EEF1AKMT1
DSN1
CCDC183
NR2F6
TMEM141
FBXW4
A4GALT
SPACA9
AK8
ZFAND6
ARHGAP42
SETD1B
SNRPC
ARL2
ELAVL3
JAGN1
ZKSCAN2
CIDEC
PLLP
CRLF3
ATAD5
MINK1
SLC39A4
CPSF1
PIK3CA
SORL1
THYN1
ACAD8
PCNX1
PCDHA4
PCDHA3
PCDHA2
MDFIC
C5
CNTRL
EHD1
R3HDM4
NECTIN1
KISS1R
ARID3A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PPIL3
NIF3L1
PPP1R15A
PLEKHA4
RBIS
KDM2A
TBC1D12
FKBP9
ZNF595
RASGRP1
TRA2B
ESR2
NOX4
GATA5
PHLDA2
PLXDC1
ARFGEF2
SERPINB6
KBTBD3
AASDHPPT
POLR3B
TMEM63A
LEFTY1
SQLE
DCAF5
KCNK4