ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
HRCT1
WDR74
STX5
CCN4
CCIN
MAMDC2
MTRNR2L2
MSH3
DHFR
RECK
SPAG8
HINT2
ARL4D
MED1
CDK12
STOML2
PIGO
FAM214B
MTRNR2L8
SIT1
CCDC107
ARHGEF39
TBC1D4
MED23
UBE2F
VMO1
PSMB6
GLTPD2
PEX3
ADAT2
DUX4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PTPRF
VPS37D
RASA2
MTRNR2L1
CD79A
ARHGEF1
ZBTB40
FAM166B
LPIN1
CLTA
RPS7
PDE4DIP
TRIM48
RGPD2
RGPD1
RNF216
TRMT10A
MTTP
TRIP4
PCLAF
INTS12
GSTCD
ATP5MC3
UTP25
IFI35
RPL27
TESK1
DMAP1
COMMD2
TEX46
KDM1A
H4C3
H1-6
MRFAP1L1
BLOC1S4
EAPP
AKIRIN2
AURKAIP1
CLP1
PPP1R11
POLR1H
ZDHHC5
TMEM262
LCNL1
CLIC3
GTF3C3
C2orf66
TOMM7
UBE2L3
RMND1
ARMT1
RUSC2
AHCY
KIF5C
SLC35E2B
NFE2L2
FRG2C
TLN1
CREB3
LRRC37A3
AP2A2
FCGR3A
SIRT5
ARL14EP
NLRX1
SSBP1
ZKSCAN8
TOP3B
CLPB
SLC35E2A
ZCCHC4
DNAJC19
GNE
CARD14
PDCL
PHKB
ITFG1
MRPL45
PSMF1
TSSC4
NUCB2
RGP1
MSMP
GBA2
TRIM55
MT1M
MT1E
VARS2
GTF2H4
CYRIB
EREG
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
DCTN3
ZFAND1
CA9
GALT
IL11RA
TRAPPC9
SNRPB2
OSCAR
NDUFA3
COX7A2
CCDC200
SYT5
RBM39
RBBP5
ATR
ZSCAN9
CD36
ZNF335
MRFAP1
EIF3E
KIF3C
MRPS14
EPRS1
KIF3B
UBFD1
EARS2
OLFML2A
NR6A1
RNF24
NUGGC
ELP3
TBC1D19
WDR43
DYM
CABLES2
FAF1
CDKN2C
SLC39A11
NCOA5
C9orf131
GBA
NDUFS7
TMEM79
SMG5
GTF2H2
NPR2
ERCC6L2
UBE2V2
ENGASE
TENT2
NYX
PPP5D1
CALM3
DPY19L4
LFNG
TEF
SLC35B1
CTNNBL1
MTERF1
SPHK2
RPL18
FAM83E
TACO1
PANK3
PRDX1
MAD1L1
NUDT1
MRM2
SLC9A1
DSTYK
PRMT1
STX16
VCP
FANCG
FRG2
AARS2
RPS14
TGM3
REXO4
ADAMTS13
MRPL58
LCN12
FBXW5
C8G
TRIOBP
HIBCH
ARL17B
PLEKHM3
INKA2
DDX20
PLXNA1
ZMAT2
HARS2
HARS1
RXRA
YWHAG
SF3A3
CST6
EIF1AD
BANF1
AMZ2
EIF4A2
CASC3
CRLS1
MYCBP2
MELK
GPCPD1
DPH5
AP1G1
ZER1
COL23A1
PRPSAP1
NUDT2
KIF24
FAM8A1
NFX1
TMEM242
LOC730098
CCL27
NOL4L
UNC13B
RRAD
CIAO2B
CES2
CDH16
DRG2
PAXBP1
TTYH2
RPL38
GPRIN2
RAC1
CETP
METTL21A
TPM2
MTF2
ACTRT3
RIN2
DDX18
COMMD6
ZMPSTE24
SNAP47
JMJD4
KRT36
KRT13
IFNGR2
RAD52
SLC28A3
ADNP
CCNC
FBXW2
MRPL35
IMMT
CDK5RAP1
RRP15
TFB1M
MRPL39
DNM2
EIF3F
NDUFC2-KCTD14
NDUFC2
EDC4
AP4E1
ID1
NOTCH2
CDC25B
CENPB
EI24
ZNF638
TOX2
NDUFAF4
KLHL32
UIMC1
MVB12A
EIF3D
ZKSCAN2
SLC25A10
MRPL12
MRPL30
MITD1
RGS20
ASXL1
POLG2
DDX5
CEP95
YTHDF2
ZNF165
OR1F12
TMEM222
SMARCD2
CCR7
SMU1
SEC22B
ZBTB3
POLR2G
STAT3
EED
TRIM65
MRPL38
MRPL44
RPL37
CARD6
RIPK3
ADCY4
ZSCAN16
ZFP36
PLEKHG2
NDUFB8
HIF1AN
NOL11
MRPL3
ATF2
CCDC88A
JAG1
PIH1D1
ALDH16A1
FKTN
ZDHHC24
ACTN3
SP2
FOXK2
PDCL3
ATP5PD
PAFAH2
WDR31
BSPRY
ZNHIT6
RBM47
NT5C
GORASP2
WDR70
NUP155
PDCD6
ALG10B
PCCA
ZNF8
FXN
UBE4A
SLC12A6
NUTM1
NOP10
RNFT1
DNAJB5
NUDT9
CIC
PSCA
JRK
POLR2M
P3H4
FKBP10
SH2B1
SNRPE
DOT1L
PECAM1
UCHL3
LUC7L2
SMCO4
EPHB4
MDM4
PRELID2
CRTC1
TANK
TXNDC11
ZNF461
PLEKHN1
PERM1
RAB40B
LMNB2
LY6E
MSL2
PLCD3
ACBD4
C8orf37
RSPH6A
TAF12
RGS14
LMAN2
SYP
PRICKLE3
COPS7A
DCP1A
FAM133B
ADM
PTPRH
ART1
PKIG
ECM1
DPEP1
ELFN2
RPL10A
LRRC59
FAM227B
DTWD1
LOC102724770
DGCR6
MUC3A
SNX16
KXD1
ZDHHC12
AFAP1
RFX1
NUCKS1
GAS8
SGSM1
CACTIN
C1QTNF8
C19orf25
MYNN
PHRF1
MLX
HSD17B1
COASY
SPATA2
ATG16L1
SOGA1
SRRD
HPS4
POLR2K
FBXO43
MLLT1
MUC20
METTL14
TRMT1
NACC1
HLA-E
TKT
PLIN3
MTRNR2L9
SLC29A3
BORCS7
ADRM1
ADGRG1
TOR1A
RIPK1
SETD1A
ORAI3
ZNF285
PRMT5
PAK4
TERF2
SLC30A6
CAVIN1
EIF3C
ARNT
LGR6
PSMD9
HPD
SYNJ2
PDLIM7
LIME1
ADAMTS9
ECSIT
CNN1
EIF3CL
SRXN1
MEGF8
TLE2
CPPED1
EPS15
KIF16B
TGM1
RABGGTA
CEP164
ISOC2
F2
SPAG4
IL32
CLK3
DNAAF4
AP3B1
CNOT3
BRAP
ACAD10
GADD45B
UBOX5
FASTKD5
NEURL4
ACAP1
TIA1
PCYOX1
SMG8
ZCCHC14
SETD1B
SORBS1
DIO1
LTO1
GLIS2
TJP3
PIGBOS1
PIGB
IRF2BP1
SWSAP1
ETFB
EPOR
CCNT1
AKNA
CCDC22
CACNA1F
UNC93B1
PDE4A
ALDH3B1
SCARB1
HPS1
FMC1-LUC7L2
FMC1
MEF2D
ZNF184
SLC25A16
FBXL19
PRX
GOLM2
CAMK2N1
ZNF131
HPS6
ARMH3
TAF1C
ADAD2
ATG4C
CLPP
ZNF436
CASTOR1
PPP1R13L
POLR1G
SMTN
CHST12
USP35
KCTD21
NAE1
DYNC2I1
FKBPL
ATF6B
KIF2C
TRIM26
AP2S1
NPAS4
KRT19
KRT15
ATF6
DUSP7
GTF2H5
CTXND2
LDLRAP1
TTYH3
COL21A1
LSP1
DAGLB
ZFP36L1
LSM14B
ZNF687
SRPK1
GTPBP6
DLAT
UBXN4
DIDO1
PTPRA
MEGF9
MRGBP
ZNF77
SCAMP4
ADAT3
TCF3
WASF2
PTPRN2
RPS6
PMEPA1
KLF1
GCDH
DNASE2
SCGB1C2
SCGB1C1
ODF3
RAB11B
PITPNA
SCML1
MKNK2
CRYAA
CRYAA2
ERCC1
XKR8
LARP1
SYMPK
FOXA3
SEPTIN9
DUSP1
ATP6V0E2
STK10
RPL6
PTPN11
EFCAB9
PRR5L
COMMD9
AKT2
TNFAIP8L1
TCIRG1
NDUFS8
MATR3
TMEM161A
PSMD4
NUP85
CYLD
ICAM1
WDR59
NPR1
ILF2
SRCIN1
MRPL54
APBA3
HCAR3
HCAR1
CLUAP1
C16orf90
RDH13
KDSR
UBE2Q1
NELFCD
CHRNB2
CAPNS1
RHOD
MAPK11
COPS4
TIMM9
KIAA0586
SLC44A2
AARSD1
SPATC1L
PLOD1
NEK6
NBPF1
PRR30
PREB
TGM2
SLC25A25
SEMA4B
NAIF1
ZBTB38
SNU13
ATP5MC1
KIFC3
EMC4
RAB2A
TUFM
S1PR4
NCLN
CSF3R
GSN
C1orf159
SLC38A10
ZNF771
ZNF48
TEX19
RASA4
CTR9
HAS1
GRSF1
SMURF2
OGFR
PDSS2
TAC4
RRP12
NKG7
CLDND2
ARHGAP39
RPL22
RNF207
RAB5C
GPS2
EIF5A
ENSA
CHMP6
TM4SF19
PHLDA2
GADD45GIP1
VPS37C
EFR3A
SMARCC1
TP53RK
SLC13A3
HTRA3
BCL9L
TRIM41
RPL36
MICOS13
HSD11B1L
TCTN3
GPR160
NUF2
RIPOR3
OR2T1
GRPEL2
ZNF234
YPEL3
TBX6
RIOX1
PTK2B
MFSD4B
POLG
FBXO46
EPOP
RPS12
ZBED9
PITPNM1
B4GALNT3
KDM3B
POFUT1
PLD1
PLAGL2
SLC27A1
CYB5B
TPCN1
SYT11
IQCD
GON4L
WNT7B
ZNF606
SOCS3
NXPH3
ICMT
HES3
TK1
AFMID
MCC
GSTA4
NICN1
ARHGEF17
AMT
HAX1
FXYD5
RIF1
CTDSP1
AURKB
NCOA6
GPSM2
SREBF1
SHFL
RHOF
TIGD1
RBM4B
EIF4E2
CNOT11
EEF1AKMT2
ABRAXAS2
TSC1
GFI1B
FOSL2
SULT2B1
H6PD
CSRP1
ZNF500
ZNF551
KANK2
SLC25A20
RNF213
ZSCAN25
SLC2A4RG
PTGES
SRA1
SLC35A4
APBB3
PTPN1
MANBAL
HNF4A
HES7
ALOXE3
NACC2
UEVLD
RABGEF1
METRN
ANTKMT
ECE1
DPP3
ZZEF1
CYB5D2
ZBTB46
SIRT4
GOLGA7B
MPZL1
HSD3B7
RPL37A
ATF3
NECTIN4
NEMF
PSMB3
PCGF2
MEX3C
EEF1AKMT1
TDRD7
RAPGEF1
GAMT
DAZAP1
ST6GALNAC6
MTOR
MICALL2
GALNT10
ZBTB45
CAV3
USP45
TSTD3
PRUNE1
MINDY1
RNF114
PRCD
CYGB
TLK2
RAB4B
MIA
IQCE
PCCB
ZNF555
LOXL4
LIMK1
FASN
TTC38
PKDREJ
PPP2R2A
MEMO1
GEMIN6
HUS1
RASA4B
LRP5L
TBC1D16
KANSL3
FER1L5
SLC27A4
RAB14
NARS1
CAMK1
STARD13
PRR5-ARHGAP8
PRR5
ADAM19
SARS2
MRPS12
HM13
LSM5
AVL9
PIP5K1C
PCOLCE
MOSPD3
GPR84
SH2D3C
PDLIM1
CDK9
MTMR14
EEF2K
PLTP
LITAF
FBXO47
SLC31A1
FKBP15
TMEM214
SNRPC
DHX15
CACNB2
GABARAPL1
SEC14L1
RNF187
INA
NEDD1
MTRNR2L10
HMGN4
PKD2L2
IGFBP1
STX10
IER2
ATP13A3
DSCC1
SP1
ZFAND4
PPP6R1
ASF1B
ZNF485
LMO7
ZMIZ1
KTN1
TMEM184A
HEXB
PEDS1-UBE2V1
PEDS1
FBXL16
TRAPPC6B
PNN
OR2B2
HSPA6
H2BC17
H2AC17
ADPRHL1
RPTN
IL12RB1
UTP3
SLC26A8
RPS29
MAPK14
FABP1
DCDC2
NEK10
TSNARE1
GGCX
ARPC3
BCAS1
ADA
MRI1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TIMM10
SMTNL1
GK5
OPA3
TFAM
RCC1
SLC44A1
SLURP1
CDK8
CWF19L2
COX16
TPK1
EPS8L2
DEAF1
TRIB3
PPP1R9B
VMAC
SPDYE16
NDUFA11
SARDH
PRRT3
KRT17
CLU
C16orf70
TARS2
SLC25A39
PTPN3
KCMF1
ERICH4
DMAC2
FAM168B
CDKN1A
CDCA4
SDC4
EGR1
DNAJB2
PPP1R9A
SCFD1
TPP2
TM9SF4
RTKN
EMILIN2
DCTN1
RCE1
MTBP
MRPL13
DGAT2
TGFBR2
USP42
TIPARP
DEF8
BCL2L1
PSMD3
CBFA2T2
MRPS23
ZBTB43
NUDCD3
SUN1
MBD4
IFT122
CENPN
AGPS