ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741423 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◣ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
HRCT1
MAMDC2
WDR74
STX5
SIT1
CCDC107
ARHGEF39
CCIN
CCN4
MED1
CDK12
RECK
KIF5C
RGPD2
RGPD1
MTRNR2L1
ARL4D
STOML2
PIGO
FAM214B
DUX4
UBE2F
VMO1
PSMB6
GLTPD2
SPHK2
RPL18
FAM83E
CCDC200
TRIM48
VARS2
GTF2H4
TESK1
LCNL1
CLIC3
TBC1D4
RASAL2
ZNF335
SLC35E2B
ZNF426
LOC102724770
DGCR6
MRPL45
MTRNR2L8
FAM166B
CLP1
ZDHHC5
SYT5
PLIN3
MTRNR2L2
MSH3
DHFR
RBM39
LPIN1
PAXBP1
IFI35
RPL27
UBE2L3
CLPB
GTF3C3
C2orf66
UBFD1
EARS2
SLC44A1
CLTA
TMEM262
HLA-E
REXO4
ADAMTS13
SPAG8
HINT2
SLC39A11
SMG8
NEURL4
ACAP1
ADRM1
TRMT10A
MTTP
SLC9A1
SEC22B
SP2
TLN1
CREB3
BORCS7
PRMT1
COL23A1
TRIM55
SH2B1
RUSC2
NOL11
DRG2
CRYAA2
CRYAA
FRG2C
RXRA
POLR2K
FBXO43
CA9
RGP1
MSMP
GBA2
EIF3E
TOP1MT
CD79A
ARHGEF1
EAPP
SIRT5
GRK6
FRG2
KIF2C
FKBPL
ATF6B
DLAT
PDSS2
NUDT2
KIF24
CDK5RAP1
EI24
RIN2
LOC730098
CCL27
TOMM7
PDE4DIP
ZNF638
TFPT
PRPF31
PAFAH2
TAF12
ZBTB40
TGM2
VCP
FANCG
ZNF718
ZNF595
RNF216
AARS2
NUCB2
ZNF572
TMEM242
RASA2
TOX2
GALT
SIGMAR1
PKIG
STK10
EFCAB9
AP2S1
GNE
SRXN1
TPM2
ZNF184
C8orf37
MUC3A
SNX16
GBA
AHCY
KXD1
VPS37D
NLRX1
OSCAR
NDUFA3
ZDHHC12
ART1
ACTRT3
OLFML2A
NR6A1
MYNN
SMARCD2
PIH1D1
ALDH16A1
RFX1
MTRNR2L9
NUCKS1
SGSM1
AFAP1
C1QTNF8
GAS8
UBE2V2
CYRIB
CACTIN
FXN
SOGA1
ATG16L1
MLX
HSD17B1
COASY
MLLT1
SLC29A3
TOR1A
SPATA2
PHRF1
KRT36
KRT13
ZDHHC24
ACTN3
TRMT1
NACC1
METTL14
C19orf25
RNF24
SORBS1
EIF3C
RIPK1
UBE4A
TKT
MUC20
GOLM2
EIF3CL
TERF2
PRMT5
SETD1A
ORAI3
PSMD9
HPD
PLXNA1
WDR43
SRRD
HPS4
GADD45B
CCR7
ZFP36L1
UIMC1
ZCCHC14
CEP164
PTPRF
TFB1M
ARNT
TJP3
ADGRG1
KIF16B
OSGIN1
SWSAP1
EPOR
PDCL
POLR2G
SMU1
PAK4
SYNJ2
ZNF285
LTO1
UBOX5
FASTKD5
ZBTB3
AP2A2
EPS15
PIGBOS1
PIGB
LCN12
FBXW5
C8G
CDC25B
SLC30A6
PDLIM7
SLC25A16
AP3B1
BRAP
ACAD10
CLK3
SLC39A10
UEVLD
CENPB
PDE4A
HPS1
RAC1
HPS6
ARMH3
MRPL39
CNOT3
CPPED1
JRK
CHST12
TIPARP
DNAAF4
ISOC2
CCNT1
SPAG4
CAVIN1
MEGF8
ADGRL1
TAF1C
ECSIT
CNN1
ADAD2
ZNF77
ZNF131
DDX17
LGR6
NDUFS7
MDM4
CABLES2
GLIS2
PTPRH
GPCPD1
SCARB1
MED23
SLC35E2A
UNC93B1
ALDH3B1
DIO1
CCDC22
CACNA1F
GTF2H5
SETD1B
SCGB1C2
SCGB1C1
ODF3
LIME1
HNRNPA2B1
CBX3
F2
PSCA
PRR5L
COMMD9
PPP6R1
ADAMTS9
GOLGA7B
TTYH3
SMCO4
TIA1
PCYOX1
RIOX1
ATF6
PRX
TLE2
MAPK11
USP35
KCTD21
SRPK1
CTXND2
TGM1
RABGGTA
CAMK2N1
SRCIN1
TENT2
MRPL35
IMMT
STX16
ZMAT2
HARS2
HARS1
RPS14
SPATC1L
MKNK2
SMTN
DYM
AKNA
NPR1
ILF2
CASTOR1
SIRT4
IL32
SLC25A20
FCGR3A
SLC35B1
ERCC1
B4GALNT3
MEF2D
TPCN1
IQCD
CARD14
RAB2A
TCTN3
RPL6
PTPN11
NAE1
ENGASE
DCDC2
YWHAG
DOT1L
KDSR
PMEPA1
MEGF9
EFR3A
LUC7L2
UBXN4
LSM14B
DYNC2I1
COPS4
IRF2BP1
MVB12A
MRGBP
PRRT3
NEK6
TCIRG1
NDUFS8
LDLRAP1
FBXL19
ATP5MC1
UTP25
ETFB
TRIM26
NPAS4
CSF3R
GPR137
SLC25A25
NAIF1
RDH13
CLPP
RAPGEF1
MELK
RBM4B
LARP1
ZFAND1
GPR160
DUSP7
RAB5C
ZNF436
NXPH3
KCNK4
FMC1-LUC7L2
FMC1
KANK2
DUSP1
ARPC3
PPP1R13L
POLR1G
GSN
TRIM41
TDRD7
PITPNA
ENSA
TEF
SLC44A2
GSTA4
CLUAP1
C16orf90
NOTCH2NLC
CETP
NUDT9
RAB11B
NCAM2
AARSD1
SCAMP4
NOTCH2NLB
NOTCH2NLA
ADAT3
PSMD4
DAGLB
SNU13
GTPBP6
GADD45GIP1
PTPRA
FOXK2
NEMF
KANSL3
FER1L5
ADNP
ATG4C
TP53I11
RHOD
MRFAP1L1
BLOC1S4
KRT19
KRT15
ICMT
HES3
STX6
RPS6
ARHGAP39
ID1
OGFR
BAD
SCML1
ATP6V0E2
ZBTB38
RAB40B
SLC38A10
PPP5D1
CALM3
TNFAIP8L1
MRPL54
APBA3
NBPF1
NUP85
RPS29
NELFCD
TIMM9
KIAA0586
TFAM
CHMP6
PRR30
PREB
TUBA1C
EPOP
WASF2
UBE2Q1
DIDO1
CHRNB2
KLF1
GCDH
DNASE2
ELP5
CTDNEP1
EPRS1
ZNF555
TEX19
PHKB
ITFG1
IFNGR2
TRIOBP
CTR9
TP53RK
SLC13A3
EMC4
PDCL3
TMEM161A
COL21A1
SLC27A4
LSP1
PHLDA2
RRP12
RPS12
ZNF234
GABARAP
MICALL2
ZNF687
TMC8
TMC6
CAPNS1
MATR3
BRMS1
BCL9L
SRA1
SLC35A4
CYLD
APBB3
SYT11
GON4L
GALNT10
RABGEF1
WDR59
CTNNBL1
LFNG
RHOF
GPSM2
PRELID2
CDCA4
ICAM1
POFUT1
PLAGL2
TCF3
RAB14
TK1
AFMID
POLG
CDON
NCOA6
GRPEL2
PRPSAP1
PTPRN2
RNF114
LY6L
HOOK1
KTN1
SEMA4B
LSM5
AVL9
TM4SF19
KDM3B
ZNF500
XKR8
SREBF1
KAAG1
MCC
TMEM107
SYMPK
FOXA3
SYT7
SEPTIN9
TTC38
PKDREJ
ZFP36
PLEKHG2
ZFAND4
MFSD4B
TUFM
KIFC3
MEX3C
AKT2
SMARCC1
DTD1
GRSF1
PIP5K1C
ALDH18A1
PRR5-ARHGAP8
PRR5
H6PD
HMGN4
NARS1
MPZL1
PEX3
ADAT2
ZCCHC4
HCAR3
HCAR1
RPL22
RNF207
NECTIN4
RIPOR3
GPS2
EIF5A
EREG
C1orf198
MDGA1
H2BC17
H2AC17
SSBP1
VPS37C
STX10
IER2
PLOD1
EEF1AKMT2
ABRAXAS2
PDLIM1
GEMIN6
PTK2B
MTMR14
DHX16
COMMD2
TMEM214
ZER1
EPHB4
ANTKMT
TSACC
CCT3
RPL36
MTHFSD
MICOS13
HSD11B1L
NEDD1
FAM193B
S1PR4
NCLN
HSPA6
H1-2
GK5
RNF213
C1orf159
NUF2
TRIM65
MRPL38
SLC27A1
MRFAP1
DPP9
PCCB
ZNF771
ZNF48
RASA4
WNT7B
HAS1
MANBAL
ST6GALNAC6
PPP2R2A
DPH5
FXYD5
ZNF485
SMURF2
RGL2
PFDN6
FBXO46
TAC4
LRRC37A3
ECE1
NKG7
MT1M
MT1E
DNAJC19
CLDND2
DEF8
DNM2
CYB5B
PARP2
TNS4
SULT2B1
GNG7
NICN1
AMT
ZNHIT6
TSC1
IQCE
GFI1B
ZNF551
RIF1
ECM1
ZSCAN25
HES7
ALOXE3
HM13
SHFL
RBBP5
HTRA3
SPOCD1
METRN
AURKB
SLC26A8
RPL37A
MAPK14
TRIP4
PRUNE1
PCLAF
MINDY1
COX5A
SARS2
MRPS12
CORO1C
OR2T1
ZNF609
YPEL3
TBX6
CTDSP1
TARS2
LZTS3
AKIRIN2
HSD3B7
NCOA5
ATF3
ZBED9
DPP3
PTPN1
GPR84
AURKAIP1
OR2B2
PITPNM1
RAB4B
MIA
EEF2K
EEF1AKMT1
NYX
SNRPC
RNF187
POLR2J3
PLD1
HUS1
PPP1R9B
PTGES
TMEM41A
PSMB3
PCGF2
SUOX
SNX11
CBX1
ZNF606
ATP13A3
SOCS3
DAZAP1
SDC4
NOL4L
STAT3
FKTN
CRLS1
KIAA0895
ACOT9
ATP5PD
YEATS2
VKORC1
PRSS53
ARHGEF17
EED
HAX1
CCNB1IP1
TRAPPC6B
PNN
KLHDC9
PCOLCE
MOSPD3
BANP
EGR1
CCNC
SH3GLB2
MIGA2
SLC25A39
HEXB
ERICH4
DMAC2
IER3
FLOT1
PHF23
DVL2
ZNF713
STRN3
CDKN1A
AP4S1
USP45
TSTD3
ADAM19
TIGD1
EIF4E2
CNOT11
ACTL6A
PPP6C
FOSL2
CSRP1
TPK1
SLC25A44
LMNB2
TREML4
SLC2A4RG
BDH1
FBXL16
B4GAT1
PEX26
RTKN
HNF4A
NACC2
INO80C
FAM161B
COQ6
ARL2
TEX49
NUDT3
H4C3
H1-6
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
ZZEF1
CYB5D2
ZBTB46
MOB3A
IZUMO4
RCC1
UROS
BCCIP
IL12RB1
ANLN
TOP1
ATG9B
ABCB8
DAAM1
TRAF6
RAG1
TMBIM1
PEDS1-UBE2V1
PEDS1
DSCC1
TBX10
TADA1
NUDT8
RS1
PPEF1
DMAP1
ZBTB43
GAMT
ADAMTSL5
GDF7
ZMIZ1
SEPTIN7
VCL
STRBP
MTOR
RAB8A
PSMF1
FUT10
PLXDC1
CENPN
ZBTB45
BCL2L1
CAV3
C17orf99
RBM12B
MARS1
ARHGAP9
MCAM
PRCD
CYGB
KRT31
TLK2
HIBCH
RCE1
CDT1
APRT
ZBTB5
LOXL4
LIMK1
E2F6
MELTF
USP42
FASN
MEMO1
LMTK3
ADPRHL1
SPC24
RASA4B
IL11RA
LRP5L
ATP6V0E1
AMZ2
PGPEP1
COX16
TMEM51
TBC1D16
CAMK1
STARD13
NDUFAB1
WIPI2
PPIL3
NIF3L1
MAD2L1BP
GTPBP2
CBFA2T2
ZBTB7B
LENEP
ARID1A
HOMEZ
FCMR
CST6
SH2D3C
NOP14
GRK4
FBXL18
CDK9
ELAVL3
PRDM11
PLTP
LITAF
TACO1
FBXO47
SLC31A1
PECAM1
FKBP15
MNT
KDM2B
MRPL44
DHX15
FAIM
CACNB2
EBI3
CBX4
PHC2
GABARAPL1
EPC2
SEC14L1
INA
PTPN3
MTRNR2L10
ZNF764
LBHD2
CKM
C9orf131
PPP1R9A
PKD2L2
PIP5KL1
SMN2
SMN1
IGFBP1
GORASP2
RPP25L
RCN1
DCTN3
CERCAM
MAST3
SP1
MEFV
MCM7
AP4M1
ASF1B
LMO7
EIF5A2
TMEM184A
PMM1
BCL9
SLC12A4
DPY19L4
CIBAR2
HIBADH
DSN1
SH3PXD2B
BAIAP2
RPTN
MRPS17
CCN5
UTP3
STARD3NL
RAB5B
PMEL
CDK2
FABP1
NEK10
ZNF443
RPS7
POLDIP3
VARS1
SRC
TSNARE1
GGCX
CRTC1
BCAS1
ADA
SLX4IP
MKKS
GLIPR1L2
AHSG
FBN3
PARP16
MRI1
SDAD1
TRIM32
RIN3