ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499855 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◣ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
MAMDC2
LOC102724770
DGCR6
WDR74
STX5
NKX1-1
XKR7
HTR5A
FAM24A
IQSEC3
HDX
TAS1R3
INSM2
MTRNR2L1
DUX4
FRG2C
MAST1
RTBDN
RAB37
ENOSF1
ZC3H18
SMIM17
LIN28A
SNAP25
CPLX2
MUC3A
EPHA10
RTN3
ATL3
ART1
KCNH7
FRG2
MAPK8IP2
ARL4D
CELSR3
GLRA1
GIT1
ANKRD13B
L1CAM
TMEM242
SNX16
BSG
VPS29
RAD9B
LHFPL4
EAPP
NEFH
SST
CADM3
BARHL1
KPNA3
CCDC200
DLGAP3
ZFR2
OSGIN1
PRLHR
HPCA
LPIN1
NTSR2
LEMD3
MARCHF4
COL23A1
IL4I1
CPNE9
CELF6
DHX40
OPRM1
PPY
ST8SIA3
RIPPLY2
CYB5R4
ZFYVE27
NEUROD4
SNTG1
WDR36
SLC12A5
RANBP3
TRIM44
ANK1
SP5
SHISAL2A
CEP295
PRKAB2
CHD1L
SLC39A3
GPR26
CYP2R1
EVI5
UPB1
RESP18
CDK5R2
PHRF1
NPPB
PTP4A2
HES6
RHBDD1
FBXL16
SRRM3
PTPRS
STOX2
ZNF75A
TIGD7
ASIC3
SLC4A2
CDK5
KCNH6
ABCA3
PDE4C
CHRM4
HHIPL1
CCDC85C
SCGN
KCNH4
HCRT
STK25
COPS8
PCNA
CDS2
TMEM230
ZCCHC7
ZNHIT3
RTN2
PPM1N
POU2F2
ZNF354C
TMEM179
GPR78
TASOR2
ICMT
HES3
KCNK12
GRIA2
KCNC1
CACNA1B
CEMIP
UNC80
DYRK4
KCNN4
LCLAT1
CADPS
CYP1B1
ASCL2
PRMT8
ZNF416
ZIK1
NOC3L
SIGLEC10
ALK
ZNF280D
NMNAT2
CPQ
SCRT1
DGAT1
LAMP1
CA4
E2F6
HS3ST2
CTDSPL
CBY3
CCDC92B
RAP1GAP
BPIFA3
IKZF3
ZPBP2
KDM3A
USP30
SVOP
GPR6
TNXB
SLC35F4
CHGB
UBE2Q1
CHRNB2
NRXN1
GCK
MYL7
CDC16
ARFGAP3
KCNB1
FZD9
RFC1
PCSK1
TEX45
BMP4
SKOR2
PUS3
DDX25
ZNF23
OGDHL
H4C3
H1-6
NEUROD1
SLC7A14
MANEAL
XKR4
SLC6A17
TMEM268
LINGO1
SOX30
DRD4
PPP1R35
ZCWPW1
MEPCE
CACNG3
MARCHF11
PRUNE2
TACSTD2
TSEN54
CASKIN2
LMLN2
LLGL2
USP14
PRSS8
PRSS36
ZNF285
PAX5
SKA3
MRPL57
B3GALNT1
VGF
DIABLO
UCN
CD8A
TTC38
PKDREJ
ODC1
ANKHD1-EIF4EBP3
ANKHD1
VSTM2B
FCMR
SIRT6
UGT8
VWC2L
SLC34A2
KLHL35
GABRG2
PMEPA1
PTPRH
B3GNT6
NEK3
ANKLE2
DLL3
SELENOV
ACTL6B
CARTPT
SCNN1D
ACTA1
NEXMIF
TMEM185B
GJA10
PTPRN
TRIM59
FHL3
UTP11
SFRP4
EPDR1
GRIN2C
COPS7A
GET4
C1QL2
GAS2L1
RASL10A
SRP19
TPH2
CD163L1
RAX
CPD
RNF130
AFAP1
H2BC11
H2AC11
H4C9
H2BC12
H2AC12
STMN3
RTEL1
TLL1
HNRNPR
CABP7
TEX30
ENTPD2
NPDC1
MAPK8
CDIP1
GUCY1A2
GFI1
SEZ6L
TMEM107
HBA2
HBA1
HBQ1
RAB11FIP4
SULT4A1
FAM221A
MFAP3L
MYT1
EFHD1
PLCH2
MLLT11
CDC42SE1
LHFPL5
CLPS
ZBTB32
NFASC
TUBB3
MC1R
CRH
XAB2
STXBP2
PCP2
CACNG2
EPN1
EIF2B3
EIF5A2
SMC1B
RIBC2
RBM28
FAM163B
PRRT4
TUBGCP3
RIPK3
ADCY4
ANKLE1
SYT5
CALM1
RNF32
KLF9
TASOR
NCAN
LACC1
CCDC122
NKX2-4
H4C12
H4C11
H2BC14
H2AC14
RRP1B
HSF2BP
GDAP1L1
MCM6
TDRD5
GRM6
PRR14
FBRS
ZNF564
GABRD
SLC6A5
DTX1
DRD2
BICDL1
MIPOL1
MSH5
CLIC1
DDAH2
PRLH
KCNS1
CD37
LRIT2
E2F3
STAT1
H3C6
H2BC8
H2AC8
OXT
LHX5
SHISA7
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PPP1R13L
POLR1G
PGRMC2
NR4A3
UNC5A
UBN2
GAL3ST4
STAG3
GPC2
TK2
CKLF-CMTM1
CKLF
H1-3
ZNF664-RFLNA
ZNF664
CCDC92
FBXO41
EGR4
SWSAP1
C10orf88
QTRT1
CPNE4
ZNF239
PPP1R3C
HDAC2
DCHS2
GPR158
MLN
CEACAM8
TREM2
ATG9B
ABCB8
PSMD7
CHGA
AK2
MEX3D
LHFPL3
SPHK1
ATP6V1B2
AIP
NXPH1
XKR9
LACTB2
TMEM121B
IRAK3
H1-2
ATP2A1
SMPD3
TBX10
H2BC15
H2AC15
FOXRED2
C3orf14
GSX1
POLDIP3
MTHFD2
DISP3
ISM1
FAM111A
RPH3A
JMJD1C
ADNP
DUT
NTM
BCL2L10
EXD1
CHP1
MRPS36
GDAP1
MMP24
CERS6
H4C7
H4C6
KCNJ9
PLLP
CCDC71L
H4C2
H3C2
H2AC4
SLC25A41
KHSRP
PRKAR1B
SCAMP5
GALNT9
GABRB3
PGBD2
ARHGAP45
ZNF566
CEACAM7
GRM1
NME6
ANKRD34C
FAM184B
RXFP3
CTNNB1
H4C8
HNRNPH1
SLC25A13
DNMT3A
ADGRA1
HDAC4
ZFP37
TRIM15
SRM
FAM185A
MASP2
MKLN1
TMED1
TBC1D30
DNER
SIRT4
COA7
GPR88
SHH
LMCD1
PMS2
AIMP2
CCDC126
STEAP1B
DNAJC6
EPM2A
BRSK2
EGR2
RASSF10
GTF2H2C_2
GTF2H2C
MAFA
ZNF148
ZC3H6
H4C14
H3C15
H3C14
H2AC19
H2AC18
SRSF7
ARL17B
EDRF1
ARL17A
USPL1
HMGB1
GCFC2
GTF2IRD2
GTF2IRD2B
SEZ6L2
ASPHD1
NOP14
GRK4
GLS2
ZSWIM7
TTC19
PRCC
AKR1E2
H4C15
MLF1
SPDYA
SYNGR3
GFER
KREMEN2
PAQR4
SIMC1
ICE2
PYURF
PIGY
HERC3
PDE1C
SCG3
CNTLN
TNFRSF9
PGBD5
CAPRIN1
LRRC8B
UBE2I
RPS6
SLC16A8
DNAH14
TARS3
PARP16
CETN3
MUC2
ASCL4
AGPS
H3C13
H2BC18
GTF3A
ZNF131
YIF1A
TMEM151A
CISD1
ACSS1
IPMK
N4BP2
PTDSS1
MTERF3
RAB4A
LAP3
KPNB1
THUMPD3
RPL31
THOC3
TMEM186
PMM2
CCND2
MRRF
SLC6A11
RPL27A
H2BC4
H2AC6
GORASP2
SYCP2
PPP1R3D
FAM217B
TBC1D15
KCNT2
AGBL3
SEH1L
ZDHHC17
TOMM5
TCHH
U2SURP
FJX1
GDA
ORC2
CCL28
AVPR1A
PIK3R3
HOXA1
ESYT3
POLD1
ACBD6
SYT14
CDCA7
ANKRD18B
PIP5KL1
DPM2
RPL21
TEFM
TTI2
EFCAB13
EIF1
PPIA
PPP2R2C
RSU1
ZNF454
SLITRK1
TRDMT1
CBR1
EPB41L5
SETD4
DCP1B
LRRC58
PUM2
ANKRD36B
TMEM18
CHEK1
H4C1
H3C1
H1-1
FBXW4
VENTX
GPR150
UTF1
FBXL13
ARMC10
PTPDC1
FZD4
GRIN1
EPCAM
CFDP1
ERMARD
CCNC
MPHOSPH6
SP8
PCDH8
EXOSC6
CYTH2
KCNJ14
OR1E2
VSX1
XK
NUDT15
PSAT1
RPP25
PM20D2
MSL2
ZFP62
POLE4
BCAT2
NT5C
ZNF441
CCDC146
CTDP1
PTGER4
ARHGEF5
HENMT1
IREB2
H2BC5
H1-4
RBM25
PBX3
GRID2
ADRB1
ERRFI1
DDX1
DIO3
ZSCAN31
TXNDC15
USP4
MTF2
SECISBP2
CKS2
LUC7L
FAM234A
HNF4G
UBFD1
EARS2
MOB4
RBM43
H3C11
H2AC16
H1-5
H4C13
NXPH2
GMCL1
POLR3E
CYP2U1
ATF4
CLN6
RCOR3
SKIL
ARID3B
PROC
MTRNR2L2
MSH3
DHFR
ID2
PDXK
DHRS3
ERCC1
SMAD7
SIRT1
AVEN
MTIF2
DNAJB2
TMEM95
KCTD11
SYNPO
FDXACB1
C11orf1
ALG9
JUNB
HOOK2
CRTC1
RBPJ
BHLHE40
OLFM2
SERPINE1
STAM2
PPP6R1
SEPTIN9
BCKDK
RNF103
BMF
ID3
ID1
ITGAE
TRIB1
LPCAT3
BIRC7
TBC1D22A
BMPR2
H3C4
GIP
RNF213
MTRNR2L8
HPS4
FZD5
GNB2
ATAD2
LRP12
FSTL3
NOS3
FCGR1A
GSDMD
SMAD3
KLF10
SLC7A5
F2
LAPTM4B
BMPER
NOTCH2
KDM6B
UAP1
HOXA3
PDZK1IP1
KIF5C
ACTR3C
TRIB3
EXOC2
ZBTB45
H4C4
LIMS1
H2BC6
NDUFAB1
HOXA4
PDGFB
CCDC88A
EP400
RIPOR3
MARCHF3
ZNF341
GLT8D1
SREBF1
KRAS
PDLIM7
LRRC37A3
TMEM9
CALM2
ZBTB38
MTHFD1L
CLDN14
CXXC5
LMNA
UBE2F
NTMT1
MRPL2
KLC4
CUL7
OPLAH
SCN1B
HPN
H2BU1
H2AW
MDC1
RCL1
SLC7A6
DGAT2
REV1
VDAC2
GLIPR1L1
CAPS2
RNF144A
TAF9
RAD17
AK6
POLR2J3
SLC45A4
BCAR1
TUBB
USP42
RNF19A
CLTC
TBC1D1
CEMIP2
PLEC
NHLRC1
COL7A1
DRAP1
C11orf68
CDK5RAP2
RHOQ
ATP6V1E2
PBRM1
GNL3
TGIF1
P2RX6
APOC2
TMEM222
BRWD1
MMP20
SLC6A9
GP1BB
C9orf50
IER3
FLOT1
TCTEX1D4
PLK3
BTBD19
BRPF1
SPATA9
RHOBTB3
JRK
CAT
ACVR1
MSH6
LRP6
ANGPTL4
MDM2
PURA
TRIM48
SPIN1
BCAP31
ABCD1
LRRC61
TRIM65
MRPL38
DUSP1
ZC3H3
SLC44A1
ZMIZ1
CFLAR
FCRLA
AIFM2
SLC9A1
GLI1
RARA
ADAM17
SLC27A5
ITGB5
PLOD2
PGLYRP4
SPACA6
PLEKHA7
H2AZ2
LURAP1L
VKORC1
RBFOX2
PC
TBC1D14
TEX46
KDM1A
ZNF718
SKI
SPTAN1
PLEKHF2
SMARCD1
FCGR3A
ZNF595
RBM8A
HERPUD2
RGS3
CLDN9
NAGLU
HMOX1
RELA
RWDD1
MRPL20
CCNL2
FGFR3
RFPL4B
STK11
GPC6
SEMA7A
TNFRSF12A
THOC6
HCFC1R1
CLDN6
WSB2
CCR6
FAM25G
FAM25C
MFSD10
SERPINB6
TMEM86A
GZF1
GPT2
FPR3
PIK3IP1
THOP1
SGTA
GPR182
OTUD7B
NKG7
ETFB
CLDND2
TAGLN2
CANT1
NBEAL2
CCDC12
MAN1A2
BAMBI
ITPK1
RAB26
ABLIM1
SMAP1
FURIN
PITX2
SNX14
SLC25A17
LARS2
PIM1
ERBB3
PHETA1
RAP1A
ST6GALNAC6
KIAA0232
TRAF7
TNIP1
NDE1
MARF1
ITLN2
ZFAND2A
USP48
NRL
CSPP1
COPS5
PIK3R1
CCPG1
C15orf65
SPRED2
SH2D6
CAPG
KANSL3
GRAMD2B
KANK1
PRKAG2
ARL6IP1
UAP1L1
APOC4
SF3A3
TTYH3
CLIP2
ARFGEF2
NFKBIA
PSPN
ALKBH7
HPCAL1
ARL4A
SERPIND1
MAP3K4
LTBP2
TLE1
YTHDF1
TNFAIP2
MACC1
ACACA
SH3YL1
ACP1
NFE2
EPB41
NR1D2