ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499856 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◣ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
MAMDC2
LOC102724770
DGCR6
WDR74
STX5
NKX1-1
FAM24A
HDX
INSM2
ZC3H18
IQSEC3
MTRNR2L1
HTR5A
DUX4
MAST1
RTBDN
LIN28A
XKR7
ENOSF1
FRG2C
GLRA1
MUC3A
CELSR3
ART1
EPHA10
TAS1R3
CPLX2
ARL4D
RTN3
ATL3
KCNH7
SNX16
TMEM242
RAB37
SMIM17
L1CAM
OSGIN1
SNAP25
EAPP
ZFR2
MAPK8IP2
CCDC200
PPY
HPCA
PRLHR
BARHL1
IL4I1
LHFPL4
ZCCHC7
FRG2
PHRF1
BSG
CADM3
LPIN1
NTSR2
TRIM44
LEMD3
ZFYVE27
ABCA3
SHISAL2A
SP5
COL23A1
EVI5
SST
MTRNR2L2
MSH3
DHFR
ZNF354C
VPS29
RAD9B
ZNHIT3
UPB1
LAMP1
COPS8
DLGAP3
RIPPLY2
CYB5R4
WDR36
MARCHF4
HES6
RFC1
ATG9B
ABCB8
KPNA3
STMN3
RTEL1
TASOR2
GFI1
ACTL6B
CPNE9
PRUNE2
OPRM1
CYP2R1
PTPRS
SLC39A3
EPN1
NPPB
NEUROD4
SWSAP1
LHFPL5
CLPS
CELF6
ZNF280D
DHX40
UNC80
CEP295
GPR26
KCNN4
DRD4
C1QL2
GCK
MYL7
STOX2
PTP4A2
PMEPA1
PCNA
CDS2
TMEM230
NEFH
PUS3
DDX25
PRMT8
SIGLEC10
PDE4C
FAM111A
TOMM5
ADAMTS15
DYRK4
SNTG1
RASSF10
ZSCAN30
ASCL2
TMEM185B
GABRG2
CDK5R2
SKOR2
SLC25A41
KHSRP
DCHS2
PRR14
FBRS
SULT4A1
XKR4
KLHL35
RAP1GAP
GJA10
DNAH14
RHBDD1
RAX
PTPRN
GRIN2C
NEUROD1
NEK3
DLL3
ALK
SRRM3
NOC3L
CNTLN
CACNG3
TAF12
HHIPL1
CCDC85C
SMC1B
RIBC2
RIPK3
ADCY4
SLC12A5
RANBP3
EIF2B3
PRKAB2
CHD1L
ACSS1
RBM28
SCGN
TRIM59
PRRT4
HENMT1
FHL3
RNF130
HDAC2
UTP11
FOXRED2
KCNK12
CCDC92B
SLC7A14
UCN
PTPRH
AP3B2
TLL1
VGF
OGDHL
SPDYA
KCNB1
PAX5
VSTM2B
DTX1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ODC1
PDE1C
TDRD5
HS3ST2
SCG3
H4C12
H4C11
H2BC14
H2AC14
CHGB
HNF4G
ZNF416
ZIK1
TEX45
EZR
NMNAT2
RTN2
PPM1N
VASP
FBXO41
EGR4
SRP19
SYCP2
PPP1R3D
FAM217B
TTYH2
RPL38
KDM3A
KCNH4
HCRT
SLC6A17
APOLD1
HEPN1
PPP1R3C
GIT1
ANKRD13B
USP14
CEMIP
HBA2
HBA1
HBQ1
ASIC3
SLC4A2
CDK5
SIRT6
SPAAR
HRCT1
LINGO1
CRH
DIABLO
CACNA1B
H4C9
H2BC12
H2AC12
GPR78
SRRM4
TNFRSF9
CPQ
SEH1L
IKZF3
ZPBP2
CBY3
MANEAL
SRM
MASP2
TTC38
PKDREJ
AHCYL2
BICDL1
CDIP1
TK2
CKLF-CMTM1
CKLF
NEXMIF
CCNL1
BMP4
ZFP37
PCSK1
SFRP4
EPDR1
ZBTB32
UBN2
ZNF75A
TIGD7
GLYATL1
VIM
NADK2
SHOX2
STEAP1B
NTM
RNF32
AIP
SELENOV
ARFGAP3
MUC2
CARTPT
PGRMC2
E2F6
QTRT1
GPR158
RPH3A
PRG3
B3GNT6
CD163L1
RRP1B
HSF2BP
H2BC11
H2AC11
TRIM26
TBX10
AFAP1
CCDC88C
NPS
NR4A3
MARCHF11
GET4
DDX56
TMED4
GLS2
CTXN2
HHATL
C3orf14
RPP25
MCM6
UBE2Q1
CHRNB2
SIRT4
CHGA
DIO3
FZD4
GPR6
MFAP3L
TASOR
RPEL1
TPH2
UGT8
FOXJ2
RASL10B
TCHH
DNAJC6
PPP1R35
ZNF292
ZCWPW1
MEPCE
SMAD7
PRDX1
CYTH2
KCNJ14
YDJC
CCDC116
GRM1
CDK5RAP3
RESP18
FZD9
RAMAC
SRSF7
CCND2
SYT5
LMLN2
H2BC5
H1-4
SLC35F4
MAPK11
NSG2
BRSK2
RPL14
ZNF664-RFLNA
ZNF664
CCDC92
CMC1
PLLP
COPS7A
SOX30
ST8SIA3
B3GALNT1
TMEM107
FAM221A
GAL3ST4
TUBGCP3
ZNF131
STAG3
GPC2
EIF5A2
KCNC1
CCT2
SPHK1
ZNF501
VWC2L
DNMT3A
ASNS
H2BC15
H2AC15
BEST1
FAM185A
SLC6A11
SUGCT
MPLKIP
WASHC1
ANKLE1
CD8A
H4C14
H3C15
H3C14
H2AC19
H2AC18
MRRF
H4C15
GABRD
GHSR
PCGF1
KLF9
KPNB1
DQX1
INPP5F
TLX2
MOB4
GDAP1L1
PRR3
GNL1
TAF7
PCDHGA1
CLDN11
TNN
ANKLE2
WASHC2A
TDRD10
SHE
BMPER
TRIM14
GRIA2
TACSTD2
SLC9A2
ZNF148
POLE4
C10orf88
CD37
ACTA1
IRS1
TSEN54
CASKIN2
LLGL2
DR1
LRRC8B
SP8
RPL13A
RPS11
ZNF485
STK25
ATIC
UBE2G2
CCNI2
PADI3
CCDC169-SOHLH2
CCDC169
FAM184B
ADNP
POLDIP3
FCMR
NHLRC1
CYP1B1
CDC16
ZNF239
H4C7
H4C6
H1-3
AVPR1A
ERVMER34-1
NOP14
GRK4
CCNB1
SLC16A8
FJX1
MESP2
SYCE2
UBE2D3
CISD2
SKA3
MRPL57
VCL
MGA
ORC2
NDUFAF2
ERCC8
MTHFD2
TMED1
PPIA
PCNX3
MAP3K11
H3C4
H4C4
H2BC6
H1-2
SLC6A4
PMVK
RRN3
RAB4A
NRXN1
H4C3
H1-6
C3orf80
CHEK1
TRIM15
SNX14
CLCN7
EGR2
AGPAT5
AKAIN1
STAT1
LEKR1
JMJD1C
GALT
SIGMAR1
ARID3C
PANK2
EFCAB13
CALB1
L3HYPDH
JKAMP
TEX30
MTIF2
RAD50
SIX6
IRAK3
CALM2
GCFC2
H4C2
H3C2
H2AC4
TMX3
CCDC102B
SMPDL3A
FABP7
HNRNPR
CASC3
ZNF420
NOS3
ARL14EP
CASD1
ZFP30
MTF2
ERBIN
SCAPER
EBAG9
THUMPD3
C5
CNTRL
RAB11FIP1
H2BC4
H2AC6
EEF1A1
ALDH3A1
CNBP
LUC7L
FAM234A
SKIL
ARID3B
PROC
ID2
PDXK
DHRS3
ERCC1
SIRT1
AVEN
MLLT11
CDC42SE1
DNAJB2
TMEM95
KCTD11
SYNPO
FDXACB1
C11orf1
ALG9
JUNB
HOOK2
CRTC1
RBPJ
BHLHE40
OLFM2
SERPINE1
STAM2
PPP6R1
SEPTIN9
BCKDK
RNF103
BMF
ID3
PPP1R13L
POLR1G
ID1
ITGAE
TRIB1
LPCAT3
BIRC7
MIPOL1
TBC1D22A
BMPR2
GIP
RNF213
MTRNR2L8
HPS4
FZD5
GNB2
ATAD2
LRP12
FSTL3
FCGR1A
GSDMD
SMAD3
KLF10
SLC7A5
F2
LAPTM4B
NOTCH2
KDM6B
UAP1
HOXA3
PDZK1IP1
KIF5C
ACTR3C
TRIB3
EXOC2
ZBTB45
LIMS1
NDUFAB1
HOXA4
PDGFB
CCDC88A
EP400
RIPOR3
MARCHF3
ZNF341
GLT8D1
SREBF1
KRAS
PDLIM7
LRRC37A3
TMEM9
ZBTB38
MTHFD1L
CLDN14
CXXC5
LMNA
UBE2F
NTMT1
RCOR3
MRPL2
KLC4
CUL7
OPLAH
SCN1B
HPN
H2BU1
H2AW
MDC1
RCL1
SLC7A6
DGAT2
REV1
VDAC2
GLIPR1L1
CAPS2
RNF144A
TAF9
RAD17
AK6
POLR2J3
SLC45A4
BCAR1
TUBB
USP42
RNF19A
CLTC
TBC1D1
CEMIP2
PLEC
COL7A1
DRAP1
C11orf68
CDK5RAP2
RHOQ
ATP6V1E2
PBRM1
GNL3
TGIF1
P2RX6
APOC2
TMEM222
BRWD1
MMP20
SLC6A9
GP1BB
C9orf50
IER3
FLOT1
TCTEX1D4
PLK3
BTBD19
BRPF1
SPATA9
RHOBTB3
JRK
CAT
ACVR1
MSH6
LRP6
ANGPTL4
MDM2
PURA
TRIM48
SPIN1
BCAP31
ABCD1
LRRC61
TRIM65
MRPL38
DUSP1
ZC3H3
SLC44A1
ZMIZ1
CFLAR
FCRLA
AIFM2
SLC9A1
GLI1
RARA
ADAM17
SLC27A5
ITGB5
PLOD2
PGLYRP4
SPACA6
PLEKHA7
H2AZ2
LURAP1L
VKORC1
RBFOX2
AGPS
FBXL13
ARMC10
PC
TBC1D14
TEX46
KDM1A
ZNF718
SKI
SPTAN1
PLEKHF2
SMARCD1
FCGR3A
ZNF595
RBM8A
HERPUD2
RGS3
CLDN9
NAGLU
HMOX1
RELA
RWDD1
MRPL20
CCNL2
FGFR3
RFPL4B
STK11
GPC6
SEMA7A
TNFRSF12A
THOC6
HCFC1R1
CLDN6
WSB2
CCR6
FAM25G
FAM25C
MFSD10
SERPINB6
TMEM86A
GZF1
GPT2
E2F3
FPR3
PIK3IP1
THOP1
SGTA
GPR182
OTUD7B
NKG7
ETFB
CLDND2
TAGLN2
CANT1
NBEAL2
CCDC12
MAN1A2
BAMBI
ITPK1
RAB26
ABLIM1
SMAP1
FURIN
PITX2
CTNNB1
SLC25A17
LARS2
ZC3H6
PIM1
ERBB3
PHETA1
RAP1A
ST6GALNAC6
KIAA0232
TRAF7
TNIP1
NDE1
MARF1
ITLN2
ZFAND2A
USP48
NRL
CSPP1
COPS5
PIK3R1
CCPG1
C15orf65
SPRED2
SH2D6
CAPG
KANSL3
TMEM268
GRAMD2B
KANK1
PRKAG2
ARL6IP1
USPL1
HMGB1
UAP1L1
APOC4
SF3A3
TTYH3
CLIP2
ARFGEF2
NFKBIA
PSPN
ALKBH7
HPCAL1
ARL4A
SERPIND1
MAP3K4
LTBP2
TLE1
YTHDF1
TNFAIP2
MACC1
ACACA
SH3YL1
ACP1
NFE2
EPB41
NR1D2
NKIRAS1
TUBG1
RETREG3
PON2
NEU1
MUS81
CFL1
ZNF76
SYNJ2
PRAME
SCRT1
DGAT1
MET
ECE1
SLC39A7
RXRB
RING1
HSD17B8
PUF60
WDFY1
NOL4L
ADAP1
TRIOBP
INHBE
UBE2B
CDKL3
FAM53B
SQSTM1
CDK19
AMD1
POLD1
NHLRC4
S100P
ANKS4B
HIBADH
THAP11
NUTF2
CENPT
ZSWIM1
SPATA25
NEURL2
CTSA
ALAD
TANGO2
CYP26A1
C3orf86
ARVCF
CSNK1D
RFX1
ASIC1
SLC39A13
TMC7
ARRDC2
NDST1
RNF168
ELL
NR4A1
UBE2H
ESRP2
FAM174C
UBAP2
KDM7A
PRR35
CTSL
LOC100287896
LIPT2
LRP5L
SSNA1
ANAPC2
XRRA1
SPCS2
GIPC1
CCL16
CCL14
SMIM11B
SMIM11A
RNFT1
DCP1A
SLC20A1
TMEM270
GNL2
COL5A3
KBTBD2
DCLRE1B
AP4B1
SEPTIN5
SLC43A3
GRAMD1A
ASS1
PCIF1
MIEN1
NODAL
MARCHF7
SSBP2
FOXJ3
SRSF6
ASB2
MYL12A
SARAF
HOXA5
ZKSCAN1
GCLM
LZTR1
MRPL40
HIRA
ITGAV
SCRIB
CMIP
TRMT2A
RANBP1
WEE1
TUFM
SH2B1
PTK2B
HSPB1
ADGRG1
HES1
ASPSCR1
ZER1
ENG
CPT1A
CCNI
KMT2E
CDC42BPA
CALM1
EDARADD
FER1L5
TAF10
RRP8
ILK
ZC3H12A
ZNF22
THEM4
IDH1
ERRFI1
MB
NCOA3
CCR7
FOXP4
SAPCD2
RALGDS
CYB561D1