ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PITX2
PMEPA1
NODAL
ZNF664-RFLNA
ZNF664
CCDC92
ETS2
SLC7A5
BMPER
CYP2B6
LAMC3
ID2
SMAD7
LEFTY2
NPM3
FGF8
CAV1
SNX9
PCNX2
PRKAB2
CHD1L
SNX18
ZNF148
SKIL
PLAGL1
COPS8
STOX2
SLC6A15
ARMC9
PMF1-BGLAP
PMF1
AGO1
ID1
TMEM63A
LEFTY1
PRR14
FBRS
POU5F1
DUX4
MTRNR2L2
MSH3
DHFR
NEURL1B
JUND
BMPR2
GAS2L1
ZFP36L2
RASL10A
SPACA6
TSPAN9
NPFFR2
WDR74
STX5
TEAD1
WNT3
RFPL4B
BCL11A
MRI1
ATG9B
EOMES
ALDH7A1
STAM2
SIRPA
MDN1
KLF10
FAM20C
OLFM2
DAB2IP
CEMIP
SMARCD1
ASIC1
SMAD3
TBC1D2
POU2F3
RNF213
KRT36
KRT13
FAM178B
NBL1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
JUNB
HOOK2
PPP2R2A
SUPT6H
SDF2
SH3GL1
CHAF1A
CHST11
AHCYL2
ZNF853
FOXB1
ZSWIM4
UNC45B
NLE1
MUC3A
NPAS4
LARS2
RHOF
SETD1B
ETS1
BUD13
NOCT
SREBF1
ZSWIM7
TTC19
LRP6
RNF32
DPPA4
NOTCH3
KAT6A
FOXJ3
LDLRAD4
IL17RD
LRRC37A3
MARCHF3
ADAMTS5
MLLT11
CDC42SE1
WNT8A
EFNB2
DRAP1
C11orf68
GRIK2
PCED1B
AMIGO2
DNAJB8
MTIF2
TAF13
GATA4
FAM184A
CALD1
OCA2
GAD1
TULP4
MAP7
GALNT9
MARCHF5
CPEB3
PRAC2
HOXB13
TRIM56
CER1
NUF2
MTRNR2L1
MTRNR2L8
EP400
NEDD4L
GAB1
JMJD1C
CHD2
CCDC200
LMLN2
CYB561
RPRM
CD8A
DCAF10
DST
RCBTB2
CD101
MTHFD1L
ABLIM1
USPL1
HMGB1
ESRP1
PTGS2
ANKRD46
ATP9B
MCHR1
CCDC88A
MAMDC2
MMP9
MRPL24
HDGF
UGT1A3
UGT1A4
NSUN6
ARL5B
BAMBI
GNB2
NRL
PCK2
NOTCH2
RET
UTS2B
CCDC50
UAP1
RAPH1
EML1
LRRC59
ADAMTS1
SNX14
WWC2
PNMA1
TBC1D5
WT1
PLAAT4
TEAD4
PTPRN2
PLPPR3
AZU1
SMAP1
AFAP1
GNL2
DNAJC6
MRPS36
PMAIP1
ZNF609
PTPN18
OAZ1
PEAK3
ARL4A
SLC20A1
GRM1
E2F3
TGDS
GPR180
HS3ST3B1
ZDHHC9
SMIM8
GJB7
PCCA
VANGL2
ASNSD1
ASDURF
NTM
TBX22
BOD1L1
ERCC1
ID3
MIPOL1
CYB561D1
ATXN7L2
MAML3
PDE6D
COPS7B
FAM168A
HTR5A
GIT1
ANKRD13B
PRIMPOL
CASP3
RAB35
TRDMT1
HINT3
AFF1
TFAP2A
CBFA2T2
USP47
MICALL1
NFIA
RANGAP1
ZC3H7B
RCAN3
C3orf52
KANSL1L
JDP2
ZFYVE16
DGAT2
RGPD8
RGPD5
RGPD6
BAZ2A
XKR7
WDFY1
P2RY2
CGB3
EPB41L4A
LHB
EMILIN1
KHK
CDKN2C
PRAMEF17
NCOA3
EPN1
RAB23
OR6J1
SLCO5A1
UBN2
ZNF521
CALN1
USP15
KIF5C
SAR1B
LHX5
LHX1
IKZF5
ACADSB
PCDHAC1
FEM1C
CNOT3
FDXACB1
C11orf1
ALG9
TAF10
RRP8
ILK
ZNF775
MTDH
ASCC3
LOC100287896
LIPT2
SIRT6
KDM5B
ROR2
PCYOX1
UBL5
FBXL12
C4orf36
HPCAL4
LEMD3
SRF
ZNF511
TUBGCP2
CBWD5
CBWD3
CBWD6
LSM14A
SEC22A
CLN6
LMNA
TLE1
NARF
PARL
SOWAHC
SEPTIN10
FAM227B
DTWD1
MEX3A
BCL6
MARCHF4
CYBC1
SHISA8
TNFRSF13C
RNF103
MMP24OS
MMP24-AS1-EDEM2
EIF6
TLCD5
IQSEC3
MRPL39
SMPD4
MZT2B
GGT7
ACSS2
AMOTL1
CREB5
PDE4DIP
GTF2H2
NRSN1
TSPAN12
RNF11
FAM162A
CCDC58
PXK
PPT1
IGF2BP3
GADD45G
MMP8
REEP5
KIF2C
ZNF358
MCOLN1
MEX3B
FRG2
MTRNR2L9
FRA10AC1
RNF212B
NCOA5
XPO5
POLH
SEC22B
BCAP31
ABCD1
TNPO1
TTC39B
PRC1
ADGRA1
SYNJ1
C9orf40
REST
TMEM121B
LRP12
CDH15
MNAT1
MAST4
SLC44A1
MFAP3L
SLC4A9
RNF6
TCEAL8
AVPR1B
LPCAT3
IFT52
NCOR2
ZBTB45
NTMT1
C9orf50
SLC27A5
CEP192
E2F2
LRCH1
TMEM215
ACSL3
ERLEC1
ASB3
HMOX2
NMRAL1
USP37
CNOT9
CPNE4
CTNNB1
KLHL18
KIF9
PPY
MYO6
TBPL1
ERI1
ZNF395
OCIAD2
EHD4
MRGPRG
LRAT
DCP1A
EPB41L2
BCR
CDKN2AIPNL
LEKR1
STX16
LRPAP1
EXOC2
ZNF341
TPI1
SPSB2
FAT1
ARHGAP28
BAIAP2L2
ZNF839
UROC1
CHST13
OR8B3
STOML2
PIGO
TMEM250
SLC25A12
CLPP
PICK1
CEMIP2
ALAD
POLE3
C9orf43
AGO3
PDE1C
PTBP2
AQP2
PTGER2
TCF7L1
HEXB
ARHGAP26
FOSL2
CERCAM
ERBIN
GTF2H2C_2
GTF2H2C
EXD1
CHP1
NAV2
ROR1
PDE4B
MDC1
TUBB
PURA
AGL
CCNH
NFE2L3
EIF2B2
OPN1LW
GLRA3
BMF
RTN4
GARS1
PPIH
ZDHHC23
TBCK
AIMP1
RTP3
LTF
USP42
LPIN1
CHN2
CPVL
NTSR2
CRBN
SLC1A1
LOC728392
HTR1E
DDIT4
CXCR5
ERMP1
ZCWPW2
AZI2
METAP2
PCBP1
LAMC2
NUDT2
KIF24
MOB4
WBP1L
KIAA1841
ANKRD18A
GLS2
GBX2
ITGB1
HDAC2
PINK1
ZNF487
VCAN
CECR2
FAM153B
RWDD1
GADD45B
EFHD1
FABP6
MRM3
GLOD4
IQGAP2
GRID2
TFAP2D
CAMSAP2
FAM171A2
TMEM132A
GRN
ATP1A4
NGFR
C1GALT1C1L
OR1E3
KLF17
BHLHE40
CLDN9
TNFRSF12A
THOC6
HCFC1R1
CLDN6
SOCS2
BPTF
DESI2
POLR3E
AAR2
NCBP3
FCHO2
ATP23
B3GLCT
TMEM170A
SHF
LAYN
CFAP161
BRIX1
AK3
ZNF354A
IFNGR1
PRMT9
USP53
EIF4G1
ULK2
RFX4
MRPL2
KLC4
CUL7
DNAJC10
ZNF654
CGGBP1
ZFHX3
OXTR
KIFC3
TUT7
FGF1
TXNL4A
RNASE10
LIMK2
NPIPB9
RFESD
ZNF251
SIT1
CCDC107
ARHGEF39
MEIG1
DCLRE1C
FGF19
UCHL1
FCGR3A
SEC62
GGH
FNBP1L
MANEA
SDHA
CCDC127
ELMO1
OPRM1
SLAMF1
GDF7
C12orf42
UBA1
TTC9
NLGN1
POLD1
FLOT2
DHRS13
TEFM
NDRG2
VPS28
HMGN2
PRKAA1
ARHGEF40
HBEGF
PRDM8
BTC
AKAP12
GTF2A1L
GLIPR1L1
CAPS2
ARL6IP1
KBTBD2
FXR1
RPGR
NIT2
GNAS
NXPE3
MTARC2
STMN1
EPCAM
MED23
HABP4
GTF3C3
C2orf66
XYLB
SLC24A1
ST6GAL1
SCOC
GABRG3
PDLIM7
ZNF165
OR1F12
HECTD1
TDG
C12orf73
MAP2K1
ZNHIT3
INTU
OSBP2
URM1
MDFIC
CYP26B1
ANKK1
SLC9A1
PIK3R3
BAIAP2
SLC35E2B
PDE8A
SMIM10L1
PRH1-TAS2R14
PRH1
HEY2
MTFR1
MKX
MAPK15
CCDC166
FAM177A1
SLC39A6
ELP2
RUBCN
FYTTD1
LLPH
SLC16A2
CORO2B
CLTC
NEU1
UBE2B
CDKL3
CCNI
CCNL1
MLLT6
UBE2D2
PET117
KAT14
HSP90AB1
ZNF641
ZNF48
PRDX1
NR4A3
PRUNE2
CDC42EP3
DMRTA1
ZNF227
LHX2
TBL1XR1
KSR1
KATNA1
GNAI2
LIG4
ABHD13
TMEM98
NMNAT2
PABPC5
CPLX2
HERPUD2
XRRA1
SPCS2
NUDCD3
UCHL5
RO60
SOX12
EYA3
PROSER1
NHLRC3
PDE8B
GATAD2B
RMDN2
ZNF385A
ATAD2
TCTEX1D4
PLK3
BTBD19
TMEM242
USP22
PHTF1
PSMD8
NANOG
CDK6
HIGD1A
TRIM65
MRPL38
CCPG1
C15orf65
HES1
PLEKHM3
UBTF
STX18
S100A2
RIPK4
GNAL
PHIP
SPAST
AKAP9
TOR2A
PPARGC1A
RBM15B
MANF
FYN
SOWAHA
NOL4L
ITGAV
THAP4
ATG4B
DOC2A
C16orf92
PARK7
TLCD3B
KLHL23
KCNH5
TEKT3
CHIC2
TDRD9
ATP5MPL
RUSC2
IL20
ANKRD50
HEXIM2
FILIP1L
IQCH
AAGAB
AMT
ZC3HAV1
FGFBP3
NICN1
DNAJC19
SPEF2
NAALAD2
DHRS3
BICD1
DEGS1
TPD52
DET1
ZNF860
OSBPL10
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MTMR6
CCDC71L
SPOP
C15orf40
SPATA13
TRIM9
CYP2U1
FAM151B
MUC21
HIVEP2
SIK2
C8orf37
TSPAN14
FAM98B
L1TD1
SETD7
KIRREL1
MTF2
STK10
EFCAB9
NDUFS3
KBTBD4
FAM180B
FAM120B
BORCS6
OR2AT4
DLL1
MAP3K4
KTN1
TAF12
ELK4
NPIPB6
EBAG9
SLC34A3
RNF224
RNF208
CYSRT1
FAM107A
NAT8L
CALB1
MSX2
KDM6B
GPC6
NFKBIA
METTL9
AFF4
TIPARP
SCAF11
TGFA
BLMH
CDC37L1
MBOAT2
INKA1
CDHR4
SPAG5
GALNT15
ZNF419
FAM221A
ZNF772
SYN2
RSKR
CALM2
HNRNPR
TMEM37
MAP3K2
PAK1
ARIH1
HCN1
AMPH
MCM7
AP4M1
AFG3L2
NRSN2
SKA3
MRPL57
PRMT5
LRRC37B
ZWILCH
SNAPC5
RPL4
CRYBG1
HTR7
PLCH1
KCNQ3
GOLGA6L7
SOCS3
AMOTL2
MKRN2OS
MKRN2
COL23A1
SST
CRYM
MYO1D
MND1
FAM222B
FUT8
DLX6
THOC2
DSTYK
BCL9L
MSRB2
ANKRD12
GAREM1
MUC12
SFRP2
CTSL
ARL8B
COX6A1
TRIAP1
RTKN2
KCNH1
REEP6
PCSK4
TMEM202
PLCL2
RBPJ
ZC3H6
ASAP3
DNAJC3
MPZL1
ADAMTS3
AP3B1
WNT5A
FOXN3
RAD54L2
HIPK1
CYP2R1
METTL2B
SLC30A5
INTS12
GSTCD
PHACTR2
AMFR
TMX3
CCDC102B
HECTD3
SLC7A8
PLAAT1
TPTEP2-CSNK1E
SSBP2
SYDE2
ALK
PKN2
TMEM263
RCBTB1
GEMIN4
GAD2
BEST4
NKX1-1
DCP1B
TMEM267
SLC35E1
BAZ2B
TJP3
CEP78
POT1
GNG3
BSCL2
SERPING1
CNTNAP3
CFHR4
TGIF1
LRRC27
BAZ1A
SLC35G1
STK32C
CDX2
IZUMO1
ANKRD18B
C9orf85
RPTOR
FUT1
FGF21
EPHA1
CNTN1
CALM1
ARL5A
SMYD3
STEAP3
MEF2A
NAA40
RYR1
RASGRP4
UAP1L1
SAPCD2
NCKAP1
MAN1B1
SUMF2
TATDN1
NDUFB9
YAF2
SLC2A9
EXD2
CDKN2A
ADAMTS18
MAT2A
CARNMT1
FERMT2
OAZ3
ADRA1B
MS4A1
TFAP2B
CNTN4
TCF12
HES6
PTPN4
HNRNPD
PAWR
TRMT6
MCM8
TEX10
TTLL7