ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702094 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◣ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

MAMDC2
DUX4
MTRNR2L1
SKIL
PRKAB2
CHD1L
COPS8
PRR14
FBRS
LOC102724770
DGCR6
ARID3B
ASIC3
PROC
MTRNR2L2
MSH3
DHFR
ID2
PDXK
PMEPA1
WDR74
STX5
NPAS4
FRG2C
DHRS3
ERCC1
SMAD7
SIRT1
ZNF148
AVEN
NOTCH2NLC
MTIF2
NOTCH2NLB
NOTCH2NLA
MLLT11
CDC42SE1
DNAJB2
MUC3A
TMEM95
KCTD11
SYNPO
FDXACB1
C11orf1
ALG9
XKR7
JUNB
HOOK2
CRTC1
RBPJ
BHLHE40
OLFM2
SERPINE1
STAM2
PPP6R1
SEPTIN9
BCKDK
RNF103
JMJD1C
BMF
ID3
PPP1R13L
POLR1G
ID1
ITGAE
ARL4D
TRIB1
ART1
ZNF664-RFLNA
ZNF664
CCDC92
IQSEC3
LPCAT3
BIRC7
MIPOL1
HTR5A
TBC1D22A
BMPR2
H3C4
NKX1-1
GIP
RNF213
MTRNR2L8
HPS4
FZD5
GNB2
ATAD2
LRP12
FSTL3
NOS3
FCGR1A
GSDMD
SMAD3
KLF10
SLC7A5
F2
LAPTM4B
BMPER
NOTCH2
KDM6B
FRG2
UAP1
CCDC200
FAM24A
HOXA3
PDZK1IP1
KIF5C
ACTR3C
TRIB3
EXOC2
ZBTB45
H4C4
LIMS1
H2BC6
NDUFAB1
HOXA4
PDGFB
CCDC88A
EP400
RIPOR3
MARCHF3
ZNF341
GLT8D1
SREBF1
KRAS
PDLIM7
LRRC37A3
TMEM9
CALM2
ZBTB38
LIN28A
MTHFD1L
CLDN14
INSM2
CXXC5
LMNA
UBE2F
NTMT1
RCOR3
MRPL2
KLC4
CUL7
OPLAH
SCN1B
HPN
H2BU1
H2AW
MDC1
RCL1
SLC7A6
DGAT2
REV1
VDAC2
GLIPR1L1
CAPS2
RNF144A
TAF9
RAD17
AK6
POLR2J3
SLC45A4
BCAR1
TUBB
USP42
RNF19A
CLTC
TBC1D1
CEMIP2
SNX16
PLEC
NHLRC1
COL7A1
DRAP1
C11orf68
CDK5RAP2
RHOQ
ATP6V1E2
PBRM1
GNL3
TGIF1
CPLX2
P2RX6
APOC2
TMEM222
BRWD1
MMP20
SLC6A9
GP1BB
C9orf50
IER3
FLOT1
TCTEX1D4
PLK3
BTBD19
BRPF1
ZC3H18
SPATA9
RHOBTB3
JRK
CAT
ACVR1
TMEM242
EAPP
MSH6
LRP6
ANGPTL4
MDM2
PURA
TRIM48
SPIN1
BCAP31
ABCD1
LRRC61
TRIM65
MRPL38
DUSP1
ZC3H3
SLC44A1
ZMIZ1
CFLAR
FCRLA
AIFM2
SLC9A1
GLI1
RARA
ADAM17
SLC27A5
ITGB5
PLOD2
KCNN4
PGLYRP4
SPACA6
PLEKHA7
H2AZ2
LURAP1L
VKORC1
RBFOX2
AGPS
FBXL13
ARMC10
PC
TBC1D14
TEX46
KDM1A
ZNF718
SKI
TRIM44
SPTAN1
OSGIN1
PLEKHF2
SMARCD1
FCGR3A
ZNF595
RBM8A
HERPUD2
RGS3
CLDN9
NAGLU
HMOX1
RELA
RWDD1
MRPL20
CCNL2
FGFR3
RFPL4B
STK11
GPC6
SEMA7A
TNFRSF12A
THOC6
HCFC1R1
CLDN6
WSB2
LEMD3
CCR6
FAM25G
FAM25C
MFSD10
SERPINB6
TMEM86A
GZF1
GPT2
E2F3
FPR3
PIK3IP1
THOP1
SGTA
GPR182
OTUD7B
NKG7
ETFB
CLDND2
CELSR3
TAGLN2
CANT1
NBEAL2
CCDC12
MAN1A2
BAMBI
ITPK1
RAB26
ABLIM1
SMAP1
FURIN
PITX2
CTNNB1
SNX14
SLC25A17
CD8A
LARS2
ZC3H6
PIM1
ERBB3
PHETA1
RAP1A
ST6GALNAC6
KIAA0232
TRAF7
TNIP1
NDE1
MARF1
ITLN2
ZFAND2A
USP48
NRL
CSPP1
COPS5
PIK3R1
CCPG1
C15orf65
SPRED2
SH2D6
CAPG
KANSL3
TMEM268
HNRNPR
GRAMD2B
KANK1
PRKAG2
ARL6IP1
USPL1
HMGB1
UAP1L1
APOC4
FHL3
SF3A3
TTYH3
CLIP2
ARFGEF2
NFKBIA
PSPN
ALKBH7
HPCAL1
ARL4A
SERPIND1
MAP3K4
LTBP2
TLE1
MOB4
YTHDF1
TNFAIP2
MACC1
ACACA
SH3YL1
ACP1
NFE2
EPB41
NR1D2
NKIRAS1
TUBG1
RETREG3
STMN3
RTEL1
PON2
NEU1
MUS81
CFL1
ZNF76
SYNJ2
PRAME
SCRT1
DGAT1
MET
ECE1
SLC39A7
RXRB
RING1
HSD17B8
PUF60
WDFY1
NOL4L
TEX45
ADAP1
TRIOBP
INHBE
UBE2B
CDKL3
FAM53B
SQSTM1
SLC12A5
CDK19
AMD1
POLD1
NHLRC4
S100P
ANKS4B
HIBADH
H4C12
H4C11
THAP11
NUTF2
CENPT
ZSWIM1
SPATA25
NEURL2
CTSA
ALAD
TANGO2
CYP26A1
C3orf86
ARVCF
CSNK1D
LPIN1
RFX1
ASIC1
SLC39A13
TMC7
ARRDC2
NDST1
RNF168
ELL
NR4A1
UBE2H
ESRP2
FAM174C
UBAP2
KDM7A
PRR35
CTSL
LOC100287896
LIPT2
LRP5L
SSNA1
ANAPC2
XRRA1
SPCS2
GIPC1
TTC38
PKDREJ
CCL16
CCL14
SMIM11B
SMIM11A
RNFT1
DCP1A
SLC20A1
TMEM270
GNL2
COL5A3
KBTBD2
DCLRE1B
AP4B1
SEPTIN5
MTF2
SLC43A3
GRAMD1A
ASS1
PCIF1
MIEN1
NODAL
MARCHF7
SSBP2
FOXJ3
SRSF6
ASB2
MYL12A
SARAF
HOXA5
ZKSCAN1
MAST1
GCLM
LZTR1
MRPL40
HIRA
ITGAV
SCRIB
CMIP
TRMT2A
RANBP1
GLRA1
WEE1
TUFM
SH2B1
PTK2B
HSPB1
ADGRG1
HES1
KCNH7
ASPSCR1
ZER1
ENG
CPT1A
CCNI
KMT2E
CDC42BPA
CALM1
EDARADD
FER1L5
TAF10
RRP8
ILK
ZC3H12A
ZNF22
THEM4
IDH1
ERRFI1
MB
NCOA3
CCR7
FOXP4
SAPCD2
RALGDS
CYB561D1
ATXN7L2
PARP10
RTBDN
SDC4
FBF1
CRYAA
CRYAA2
HDHD3
LMO7
RAB37
ARHGEF16
FHL2
BRIX1
DNMT3B
TTC12
PEX11G
PPP1R3E
BCL2L2-PABPN1
BCL2L2
USP32
NFYB
COL18A1
MMP9
CDKN1A
NR2F6
BSG
EPS15
CCNL1
KIF13A
RCC2
DPP9
TMEM87B
MYL12B
SSH1
KTN1
MARCHF2
DRD4
RNF130
NDRG1
ZSWIM7
TTC19
LRMDA
GRHL3
C15orf39
OGFOD2
ARL6IP4
ARL8B
ARID3A
ACSL3
ZG16B
NTAN1
TSKU
TSPAN10
NPLOC4
MTX2
TMEM275
TACC1
BDH1
INAVA
STX1A
EPHA10
PPP1R35
SLC16A5
H4C5
H2BC7
H2AC7
PTPRN2
ZNF697
ATP6V1G1
SMTN
SLC9A3R2
CHIC2
RHBDD1
CDH15
GSE1
SULT1A4
SULT1A3
ADK
NDUFAF6
FAM107B
CA5B
HOXD12
HOXD11
L1CAM
AGO2
MEFV
WWC2
DIXDC1
CBFA2T2
COL11A2
NDUFS7
MKNK2
H6PD
SNAP29
PI4KA
NCOA5
PCK2
SCT
CDHR5
ZNF592
RTN4RL2
LYL1
TMEM37
ARL5A
MLLT6
IRF2BP2
DIP2A
MTRNR2L9
PRMT3
H2BC15
H2AC15
NCKAP1
AXDND1
RUNX1
POR
ZP3
ZNF367
SOCS2
OSBPL6
MAPKAPK3
CISH
SPIRE2
TBL1XR1
SLC16A1
EPB41L2
ANKRD46
THUMPD1
MON1A
ELOVL5
CCN2
LRP5
NR1D1
ISG15
TF
MAF1
CYC1
PIM3
DPY19L4
TRDMT1
SAMD11
RGS19
OPRL1
LKAAEAR1
OBSL1
INHA
SLC7A2
ODC1
TSPAN12
DCK
ANXA8
SLX1B
SLX1A
BOLA2B
BOLA2
H3-3A
ETS2
EPHX1
SLC25A45
RBM6
FRMD8
HEY1
UNG
CLTB
ALKBH2
PRKDC
MCM4
WDR97
PAQR8
FLOT2
DHRS13
APOE
SOCS3
TMEM127
MRPS23
CIAO1
TMTC4
RNF11
GBA
ATG9B
C1orf116
NCS1
GRAP
NUB1
TTLL6
SERINC2
ETF1
FST
USP35
UBE3C
AKAP1
HNRNPF
RNF139
MBNL3
KIFC3
ZNF165
OR1F12
KLHL18
KIF9
NBN
C6orf89
BARHL1
TSN
EFNA2
ACSL4
GP9
SYNRG
MAP3K8
DNAJB12
DAPK1
FAM102A
NBPF1
FASN
KPNA7
NCOA4
SLC6A12
FAM168B
PHF19
AGBL2
CPNE7
RAPH1
E4F1
CGB8
NUF2
ROBO3
ITGB1
WNT7B
ST3GAL4
STAT1
NSMCE1
IL1R1
UBN2
CARHSP1
APOC1
ST3GAL2
EHD1
NARF
DNAJB5
SRF
TBC1D5
DNAJB3
SULT2B1
EPB41L1
AGPAT3
NR0B2
PHLDB2
SMIM17
REXO1
ARSB
SPAG9
UNC45B
PHRF1
NLE1
CALCOCO2
MAPK13
DDIT4
ZKSCAN2
TEN1
ACOX1
CD44
ABCC3
USP9X
SMARCD2
RAB43
HNRNPAB
CARD14
CPPED1
BUD13
TLCD4
MTERF4
GRAPL
GATAD2B
DRC7
H2BC14
H2AC14
CFAP251
TUFT1
BPTF
KCTD18
AHDC1
AGAP3
ZNRF2
TCF12
MESP2
RILP
NT5C
ARHGEF28
SPATA2L
UBAP1
APBA2
ACLY
SPATA1
RNF220
GNG5
PTPDC1
RTN3
ATL3
ACSL1
ZNRF3
BICD1
CTNNA1
SLC49A3
KLF4
OSGIN2
MIA2
KRTAP5-6
RASAL2
PPP6R3
HEXB
MAML3
GMEB2
THAP9
SEC31A
PIK3R3
BAIAP2
ANKRD28
KRT36
DENND4B
CIRBP
UBAC1
TASOR2
NBPF12
AXL
UBE2K
ATF3
ZBTB4
SLC35G6
POLR2A
MAST2
SPATA20
IL13RA1
IKZF5
ACADSB
C11orf91
NIPSNAP2
KMT2A
DMTF1
UBE2D2
TAF12
NOMO3
ABCC6
SETD5
H4C14
H3C15
H3C14
H2AC19
H2AC18
DNAJC6
SEPHS2
NPAS2
PLEKHM3
KRT13
PPP1R3C
CDK3
KLHL5
ESCO1
PPP1CB
KLHL12
CNNM3
SMARCD3
NDUFV2
PET117
KAT14
SF3A2
PLEKHJ1
CX3CL1
RGPD1
PGRMC2
SFT2D2
SECISBP2
CKS2
RIPPLY2
PLA2G10
FRA10AC1
CYB5R4
PPP1R12B
PARL
TBC1D13
SMURF2
HOXC9
VMO1
HNRNPUL1
AHCY
TUBB1
PXT1
KCTD20
CCNE1
MIS18BP1
ZNF101
ATP13A1
SLC25A32
DCAF13
ADSS1
LANCL2
GALNT11
LIFR
MAFK
DEGS1
ICMT
HES3
KAT5
KLF3
FBXO4
WDR81
TUBA1C
TNIP2
ZBTB40
ZFAT
TIGD2
PTP4A3
ANK1
RCC1
KANK2
GET4
CRLS1
CGB5
ANKLE2
UBTF
FGFR4
PRRT1B
GNA12
ARAP1
ROCK2
IST1
MOB1B
RDX
TOLLIP
MRPS7
MIF4GD
GGA3
FAH
BOLA2-SMG1P6
PLAGL1
WTAP
SOD2
RHCE
MAPK1
RNF32
TARS1
SLC39A3
DCAF11
CTCF
WDR36
TMEM41B
TGM2
JUND
ETV4
LOC102724265
RICTOR
POLD4
PKP4
CCDC148
PPFIBP2
SULT1C4
RNF166
ENOSF1
CTU2
GRIN3B
ELK4
COL16A1
TGM1
NQO2
TLCD4-RWDD3
TOE1
NKD1
MUTYH
LPCAT2
TLK1
EEF1A1
HSP90AB1
CEP57L1
ATP7A
DNAJB1
USP22
SH3BP4
MRPL44
SEC14L1
PHACTR4
MEMO1