ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
NODAL
CCDC92
FGF8
PRKAB2
CHD1L
CAV1
SNX18
STOX2
COPS8
SKIL
ZNF148
ID1
LEFTY1
FBRS
MTRNR2L2
BMPR2
SPACA6
GAS2L1
STAM2
NPFFR2
MRI1
MTRNR2L8
OLFM2
KLF10
CHST11
ZSWIM4
PPP2R2A
LARS2
BUD13
NPAS4
ZNF853
ZSWIM7
TTC19
NOCT
RNF32
LRRC37A3
KAT6A
NEDD4L
FOXJ3
MAP7
LDLRAD4
NOTCH3
LRP6
DRAP1
C11orf68
MTIF2
MLLT11
CDC42SE1
CALD1
FAM184A
MARCHF3
CD8A
NUF2
GRIK2
MARCHF5
CPEB3
CER1
RCBTB2
JMJD1C
GAB1
DST
CYB561
DCAF10
EP400
USPL1
HMGB1
MTHFD1L
GNL2
CCDC88A
NOTCH2NLC
GNB2
ABLIM1
CCDC50
BAMBI
PTGS2
PCK2
TBC1D5
UAP1
RET
ANKRD46
SMAP1
NSUN6
MIPOL1
SNX14
E2F3
PMAIP1
EML1
RAPH1
PCCA
AFF1
TBX22
PLPPR3
BOD1L1
RGPD6
RGPD8
RGPD5
PNMA1
LRRC59
WWC2
MAML3
TEAD4
PTPN18
WDFY1
GRM1
PCDHAC1
ARL4A
ZNF609
DNAJC6
C3orf52
SLC20A1
SMIM8
ZFYVE16
KANSL1L
COPS7B
VANGL2
DGAT2
RAB23
BAZ2A
ATXN7L2
GPR180
ZNF521
P2RY2
NCOA3
FAM168A
HTR5A
IKZF5
ACADSB
HINT3
USP47
FEM1C
TRDMT1
NFIA
ASCC3
RCAN3
FBXL12
RANGAP1
ZC3H7B
LEMD3
LOC100287896
LIPT2
SRF
FAM162A
CCDC58
JDP2
MARCHF4
LSM14A
C4orf36
RNF213
XKR7
SOWAHC
SEPTIN10
POLE3
C9orf43
KHK
USP15
AMOTL1
SLCO5A1
TSPAN12
PARL
XPO5
POLH
OCIAD2
MTRNR2L9
GTF2H2C_2
GTF2H2
PPT1
REEP5
GADD45G
FDXACB1
C11orf1
SAR1B
C9orf40
REST
LPCAT3
PRC1
MTDH
KDM5B
LRP12
RRP8
ILK
MRPL39
SYNJ1
FAM227B
DTWD1
MFAP3L
TMEM121B
SMPD4
MZT2B
ANKRD18A
RNF103
IFT52
USP37
CNOT9
IQSEC3
ERLEC1
ASB3
NRSN1
GGT7
E2F2
ARHGAP28
MCOLN1
TLCD5
ZNF839
IGF2BP3
MMP24OS
MMP24-AS1-EDEM2
ZNF341
ZBTB45
FRA10AC1
TNPO1
TTC39B
NMRAL1
HMOX2
CHST13
EIF2B2
NCOA5
PIGO
RFESD
MEX3B
CCNH
CDKN2AIPNL
AGO3
GLRA3
AVPR1B
RNF11
CRBN
PTBP2
BPTF
TMEM250
CEMIP2
SHF
MOB4
HEXB
PXK
MNAT1
CPVL
LOC728392
TCEAL8
CLDN6
ERMP1
RTN4
RNF6
TMEM215
SLC44A1
DCP1A
RWDD1
ACSL3
KLHL18
KIF9
EXD1
CHP1
LRCH1
CPNE4
CTNNB1
DDIT4
GARS1
TBPL1
EXOC2
USP42
UBE2D2
CBWD5
CBWD3
WBP1L
ZNF395
ERI1
SPSB2
MYO6
ZNF197
ZNF664-RFLNA
ZNF664
CCNL1
STX16
CAMSAP2
TMEM132A
PDE1C
GRM2
LAYN
KIAA1841
POLR3E
SPATA18
MRPL2
KLC4
SOCS2
AK3
OXTR
BRIX1
PPIH
MANEA
USP53
FOSL2
OPRM1
RPGR
ARHGAP26
FXR1
ERBIN
MDC1
ZCWPW2
AZI2
FNBP1L
SMIM10L1
PRH1-TAS2R14
ZDHHC23
CAPS2
HSP90AB1
CERCAM
XYLB
VPS28
ELMO1
SEC22A
HTR1E
BICD1
NTSR2
HMGN2
LAMC2
KLF17
ZNF641
NDRG2
HECTD1
GTF2H2C
AAR2
ARHGEF40
OSBP2
MRPL38
PIK3R3
GABRG3
ITGB1
TMEM170A
HEXIM2
SLC24A1
INTS14
MRM3
GLOD4
AKAP12
KBTBD2
ZNF354A
PDE8A
HDAC2
C12orf73
GADD45B
EYA3
CFAP161
DESI2
NCBP3
ATP23
B3GLCT
MAP2K1
FABP6
CDC42EP3
EIF4G1
LIG4
ABHD13
CPLX2
EFHD1
HERPUD2
PRDX1
ELK4
KATNA1
HABP4
DNAJC10
MSRB2
IFNGR1
FAM120B
ZFHX3
MEIG1
ULK2
TTC9
NANOG
MAPK15
CCPG1
C15orf65
ZNF654
CGGBP1
GNAI2
WNT5A
KIFC3
NUDCD3
FCHO2
PHIP
PRMT5
NIT2
PRMT9
UCHL1
ATAD2
VDAC1
PLEKHM3
GGH
AMFR
CBWD6
CCDC107
NXPE3
FYN
NAALAD2
PDE8B
KCNH5
ZNF165
MCM7
AP4M1
SEC62
METTL2A
AKAP9
TMX3
CCDC102B
C12orf42
PET117
KAT14
USP22
CHIC2
MED23
DHRS13
TUT7
LIMK2
CYP2R1
SDHA
CCDC127
MTARC2
RIPK4
DHRS3
ARL6IP1
THAP4
ATG4B
GNAS
IQCH
AAGAB
BTC
EPCAM
UBE2B
CDKL3
SLC35E2B
RUSC2
RMDN2
NOTCH2
TRIM9
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZC3H6
MTF2
GTF3C3
MDFIC
L1TD1
CLTC
XRRA1
SPCS2
TGFA
PRKAA1
ZNF860
OSBPL10
EXOC6B
FAM151B
PRUNE2
MKX
ANKK1
CCNI
LRRC37B
RUBCN
FYTTD1
DMRTA1
AMPH
SLC39A6
CDC37L1
RNF224
GATAD2B
UCHL5
RO60
INKA1
MBOAT2
TEKT3
TMEM242
ZNF48
PHTF1
RTKN2
ANKRD12
TOR2A
FAM222B
PROSER1
NHLRC3
SYN2
PABPC5
TBL1XR1
STX18
TEFM
ATP5MPL
NRSN2
FAM177A1
PLCH1
RIMBP2
TRIAP1
GNAL
RBM15B
PDE4DIP
MMP2
PLK3
DSTYK
TPD52
SKA3
MRPL57
PARK7
DNAJC3
FGFBP3
RPTOR
KLHL23
DCP1B
IL20
RAD54L2
TMEM267
PHACTR2
NDUFS3
KBTBD4
FILIP1L
SPEF2
ADAMTS3
RBPJ
NLE1
SPAST
ANKRD50
SLC30A5
TAF12
CCDC71L
DNAJC19
CYP2U1
SLC44A2
NOTCH2NLA
METTL9
DYRK3
C8orf37
SLC35A3
FAM98B
MTMR6
SPOP
UROD
HECTD3
AFF4
EBAG9
TMEM263
SUMF2
EEF1AKMT1
EXD2
ASAP3
CALB1
FAM221A
NFKBIA
MAP3K4
KTN1
STMN3
SIK2
ADNP
SNAPC5
FAM107A
HNRNPR
TIPARP
PURA
BLMH
AMN1
HCN1
CALM2
KANSL3
AFG3L2
ATAD2B
STEAP3
NAA40
HTR7
PAK1
TMEM37
CCDC69
CRYBG1
BSCL2
FUT1
CDKN2A
GNG3
CNTN4
SST
SEPSECS
DDHD1
ARIH1
NAT8L
KCNQ3
RBMS1
PAWR
MND1
FUT8
PPP1R13L
POLR1G
TGIF1
NR1H3
ACP2
AMOTL2
KCNH1
LYRM1
DCUN1D3
C15orf40
CTSL
INTS12
GSTCD
HIPK1
GAREM1
RCOR2
VDAC2
CCN2
RNF166
CTU2
SERPING1
RCL1
ARID2
METTL2B
NOTCH2NLB
LONP2
ABCC11
PAFAH1B2
PLAAT1
SEMA6A
PLCL2
FAM83B
MRPL40
HIRA
SSBP2
SYDE2
STK17A
TPK1
TSKU
SEC11A
VPS18
GEMIN4
TJP3
THOC2
AS3MT
VGLL3
GAD2
CCKBR
MEF2A
HNRNPA2B1
CBX3
SLC35E1
EIF3A
CHST15
BAZ2B
TTC14
MAP2
POT1
FBXO10
FOXN3
STK32C
LRRC27
HS3ST2
AP3B1
CACHD1
CNTNAP3
CALM1
UBN2
PKN2
HNRNPD
IL11
NCKAP1
MAT2A
CABIN1
CCDC59
ZBTB2
TAP1
PSMB9
SPAG1
MPHOSPH8
UAP1L1
ARL5A
TCF12
SMAD3
ELF2
TTC23L
ZNF846
TRMT6
MCM8
PTPN4
ZDHHC1
ASB13
FERMT2
RBM47
ADRA1B
ADAMTS18
RBP1
GCLM
TCTE3
ERMARD
ACOT7
TMTC4
LSM5
FOSL1
AVL9
TTLL7
PDLIM5
SYT14
CARNMT1
DHRS4
DHRS4L2
HES6
PSMF1
IPO13
NSUN7
DTD2
SNX25
ATXN2L
ARHGEF1
RRM1
RANBP2
FBXO22
RB1
SMPDL3A
NUAK1
USP3
PCID2
CUL4A
HBS1L
FRMPD1
STXBP5L
FZD1
LDHA
KANSL1
RWDD2A
PGM3
VPS36
RAB11FIP3
MAP4K5
ATL1
MB21D2
SNTG2
AGPS
POLD4
USP30
C8orf88
TATDN2
SPRYD7
THRB
GPHN
IFRD2
KIF21A
HECTD2
SPATC1L
FBP1
ACOXL
CORO2A
BARD1
RBIS
IL17RA
TCF4
IKZF3
COMMD8
TRAPPC11
RWDD4
MMUT
CENPQ
FGF9
JAM2
ELAVL2
OTUD7B
KCTD18
SUGCT
MPLKIP
ZSCAN22
ORC5
LOC101928764
GBA
LIMS1
SSH2
EFCAB5
PIK3C2B
PATZ1
PRLHR
ZCCHC18
LOC107986453
YARS1
S100PBP
PIGH
PSIP1
OTUD4
TLCD4-RWDD3
TLCD4
FAM174B
WTAP
SOD2
NUP153
SDE2
COG2
EFCAB14
SRSF5
ZNF280C
SUPV3L1
UQCRC1
KATNIP
GTF3C1
GALNT3
DENND4B
FGD4
IPP
ZNF594
MKS1
ATR
LNPEP
ASAH1
FEZ2
TIMP4
FGFR4
URB2
TAF5L
SIDT2
CCN1
BBS12
NEIL2
FSIP2
FBN2
MIXL1
APCDD1
UBE2Z
SLC25A51
TDRKH
WDHD1
SOCS4
EFR3B
PCMTD1
PSMD14
PTBP3
PPP1R14A
ICE2
SCN9A
PPM1D
SEMA3C
ZNF518A
DTNA
RSPO2
CNTNAP5
C14orf39
OXR1
EREG
HCFC2
GLT8D2
PDCD6IP
SOCS5
CRH
PLPP5
ARHGAP42
STK32A
RNF7
JAK2
TMEM222
ROPN1
GPT2
ZC3H8
SF3A3
SYNPO2
NKX2-6
MYL12B
SYNGR2
CYREN
TM7SF3
PRDM1
ZNF397
PSMB2
ADAM19
PTP4A1
C17orf64
SIRT1
KCTD11
SERPINE1
PPP6R1
TRIB1
DNAJB2
SMAD7
H4C4
NDUFAB1
ZNF595
TMEM9
RCOR3
SLC45A4
PLEC
SLC7A6
COL7A1
BRWD1
OPLAH
AIFM2
BRPF1
SPIN1
FBXL13
ARMC10
P2RX6
NTMT1
ADAM17
JRK
HPN
TRIM44
PLOD2
NHLRC1
KDM1A
ITPK1
H2AZ2
CELSR3
GZF1
PIM1
TNFRSF12A
ACVR1
ALKBH7
FSTL3
TAGLN2
GSDMD
NUTF2
KRAS
CENPT
SERPINB1
BHLHE40
FLOT1
ANKS4B
NR1D2
NKIRAS1
MET
ACACA
RNFT1
PRAME
HIBADH
POLR2J3
RFX1
SLC39A13
SERPINB6
HPCAL1
TUBG1
RETREG3
ZBTB38
ADAP1
GLRA1
SREBF1
NR4A1
KDM7A
TRMT2A
RANBP1
ZBTB4
SARAF
POLR2A
NEURL2
CTSA
TUFM
SH2B1
TTC12
THEM4
OBSL1
INHA
DGAT1
USP32
LZTR1
NDRG1
MTX2
TSPAN10
NPLOC4
FAM107B
EPHA10
MAPKAPK3
CISH
TTC38
L1CAM
GRHL3
NDUFAF6
KIF13A
RNF130
MARCHF7
ARL8B
PRMT3
SLC25A45
RHBDD1
TRIB3
AKAP1
NR2F6
DPY19L4
H4C12
LYL1
NFE2
DCK
SLC16A1
NUB1
OSBPL6
UBE3C
NRL
ZNF592
ZNF697
BARHL1
NBN
SYNRG
CPPED1
ADK
DNAJB12
NBPF1
HEY1
ZKSCAN2
CBFA2T2
SSNA1
ANAPC2
SMARCD2
ANKRD28
PLEKHF2
ZNRF2
TBC1D14
POLD1
PLEKHJ1
ZNRF3
H4C11
KMT2A
PTPDC1