ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

WDR74
ZBTB4
POLR2A
POLDIP3
TRPC1
HEXIM1
C12orf65
ZNF143
GTF2A1
APTX
DNAJA1
NUDT15
SLC38A2
MCL1
BTG1
HSP90AB1
KDM4A
PARP2
H4C3
RPLP0
SRSF7
EIF4G2
PCIF1
ID4
EIF2AK3
DNAJB1
RPL5
FUS
SRSF3
NARF
PABPC1
GLUL
LRCH4
FBXO24
HERPUD1
ZBTB37
GSK3B
H4C11
HNRNPH1
TGOLN2
SPTAN1
CIRBP
PRDX1
H3C6
CSRNP2
H1-2
CALM1
KANSL2
IMMT
CSKMT
C11orf98
CCN2
CLSPN
TRA2B
PNRC2
SRSF5
RPL3
TRAF7
TMBIM6
KNTC1
SIRT4
UBE2S
OAZ1
MKNK2
HNRNPA2B1
CBX3
MYLIP
ARL15
FOS
SNRNP70
VCL
AFF1
NAGK
ANKRD17
ARF4
FSCN1
JUNB
SETD5
CCN1
RPL13A
MICU2
DUSP1
SESN2
SECISBP2
VPS26C
ZFAND5
POLR3D
HSPA5
RPS12
FAM168B
TTI2
PRKRA
PJVK
RPL12
LRSAM1
JPT1
CYTH2
HSPA1B
SRSF6
DENND6A
DDX5
FAM53C
CDC25C
IER5L
KDSR
MTHFD2
H3-3B
H2AX
SRSF2
MFSD11
TOB1
HEATR5A
SFPQ
CSE1L
ADAMTS1
ZNFX1
UBE2Z
PFKFB3
NXF1
UBC
ZNF529
ACTL6A
TUFT1
IER5
CALR
SOCS1
HEXIM2
ARL6IP1
TRA2A
MAT2B
SKP1
NDRG1
DDX59
COQ10B
DNAJC25-GNG10
DNAJC25
ZCWPW1
MEPCE
VAMP1
RPLP1
ID2
CTNNB1
JUND
TAF8
MRPS18B
TMEM18
USP42
SREK1
NUDCD1
H2AZ1
UBR4
C12orf57
NASP
TMEM258
FEN1
KRT19
KMT2E
L3HYPDH
JKAMP
S100A13
CHTOP
H4C12
DDX1
EEF1A1
MAK16
RPS2
SIRT1
BRD2
ARRDC3
HNRNPC
TNFAIP1
IFT20
KLF7
UBB
SDCBP
EEF2
TJP1
KAT7
CHMP4A
TAF15
C11orf54
TAF1D
ZNF207
H4C15
H4C14
OAT
MAPK1IP1L
H2AC19
H2AC18
CLTC
LUC7L
DHPS
CALM2
IFRD1
JUN
NABP1
AMD1
SLC39A10
DDIT3
USPL1
HMGB1
KIF27
MORF4L1
MAT2A
UBE2D3
HDAC4
RHOB
GADD45B
RBM14-RBM4
RBM14
PDIA3
LGMN
TM2D1
ZNF524
FIZ1
ZSCAN31
PGAP2
TMSB4X
EIF4A2
RPS20
TAX1BP3
EMC6
WDR1
EMSY
FAM3C
WSB1
BAIAP2
PPIA
POR
GNAS
ZNF248
PITRM1
LBH
CENPBD1
SLC3A2
SEPTIN2
HDLBP
INTS6
H2BC17
H2AC17
H1-10
RRBP1
BAMBI
CYP20A1
H2BC21
H2AC20
FTL
ING1
C5orf24
RPS27
ATF4
USP48
CENPC
PPIL3
NIF3L1
FER
HSPA8
SMIM14
PARK7
GPR89B
DNAJB5
STK17A
TMEM242
LIMS1
ACTB
RBM7
C11orf71
CREBZF
GADD45G
PCNA
FN1
GAPDH
SERTAD2
TUBB4B
YWHAQ
H2BC15
H2AC15
PLAG1
CHCHD7
SLC35C2
AMOTL2
H3C2
TNRC6B
YTHDC1
GTPBP8
ARIH1
PLK2
EIF5
ARSD
RBM12
CPNE1
LUZP1
SARAF
ARHGEF7
UBAP2
WAC
PPP1R15A
CBX5
HNRNPA1
EIF1
ZNF326
LUC7L3
ISCA1
STMN1
ATXN7L2
P4HA1
HNRNPAB
TSC22D1
THAP5
DNAJB9
IL6ST
RCC1
AKIRIN2
H2BC8
H2AC8
JMJD1C
TSPYL2
TMEM263
MAP3K2
RUSF1
SLC7A5
ERRFI1
TPI1
SDHAF2
CPSF7
ARHGAP35
UAP1
UHRF1BP1L
SLC16A1
PIK3R3
CAMSAP2
ZNF24
EHD1
MPP5
RBM25
DDX50
FAM200B
FRS2
FDXACB1
C11orf1
NREP
TP53BP2
RPL41
POMZP3
FEM1C
KIF5B
PTPN14
ACSL3
DAB2
CELSR3
HNRNPA0
NFKBIZ
ARHGAP19
PAIP2
SPTSSA
CCNG1
GPATCH3
S100A1
H2AC11
CNN3
H2BC11
H4C4
H2BC12
H2AC12
CDK12
CCT2
DESI2
CCNT2
C19orf48
H2AC21
USO1
H1-4
H2BC5
MMADHC
IVNS1ABP
TUBA1C
USP40
POLR2J3
AZIN1
PDCD4
MRTFA
HMGA1
ZC3H6
MATR3
NBEAL1
H3C15
H3C14
CCNB2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
HMGN2
ATL2
NFYC
ETNK1
NDEL1
ABI2
KLHDC2
PIK3C2A
ZNF766
TMSB10
TXNRD1
SFR1
SLC36A4
SLTM
SLC20A1
TSC22D2
H4C5
TPT1
PHACTR2
HNRNPDL
ID1
MKLN1
SDCBP2
CLU
KRT8
RPS6
XBP1
EXT1
LSM14A
ZNF518A
RPN1
RNF220
ITFG2
ELMOD2
SKIL
PRKAB2
CHD1L
FBRS
COPS8
NPAS4
MTIF2
MTRNR2L2
ZNF148
MLLT11
CDC42SE1
KCTD11
XKR7
STAM2
SERPINE1
RBPJ
OLFM2
PPP6R1
RNF103
TRIB1
MTRNR2L8
CCDC92
PPP1R13L
POLR1G
IQSEC3
LPCAT3
MIPOL1
HTR5A
PMEPA1
GNB2
DNAJB2
LRP12
BMPR2
SMAD7
DHRS3
CCDC88A
EXOC2
EP400
NDUFAB1
ZNF341
LRRC37A3
ZNF595
ATAD2
TMEM9
CAPS2
RCL1
ZNF664-RFLNA
ZNF664
RCOR3
MRPL2
KLC4
MDC1
VDAC2
RNF213
SLC45A4
MTHFD1L
PLEC
CPLX2
TGIF1
SLC7A6
COL7A1
KLF10
BRWD1
TMEM222
MRPL38
OPLAH
AIFM2
BRPF1
PLK3
LRP6
SPIN1
DRAP1
C11orf68
SLC44A1
FBXL13
ARMC10
DGAT2
P2RX6
NTMT1
ADAM17
JRK
HPN
TRIM44
OTUD7B
RWDD1
LEMD3
ZBTB45
PLOD2
NHLRC1
HERPUD2
KDM1A
ITPK1
H2AZ2
HNRNPR
GZF1
LARS2
SNX14
PIM1
NFKBIA
TNFRSF12A
CCPG1
C15orf65
SMAP1
ACVR1
ALKBH7
FSTL3
TAGLN2
NOTCH2NLC
CD8A
GSDMD
MOB4
NUTF2
MAP3K4
KRAS
CENPT
SERPINB1
BHLHE40
FLOT1
WDFY1
ANKS4B
NR1D2
NKIRAS1
LOC100287896
LIPT2
E2F3
MET
ACACA
RNFT1
PRAME
HIBADH
UBE2B
CDKL3
RFX1
SPACA6
KANSL3
CTSL
SLC39A13
SERPINB6
MTF2
ARL4A
XRRA1
SPCS2
HPCAL1
TUBG1
RETREG3
FOXJ3
MRPL40
HIRA
ZBTB38
ADAP1
SSBP2
GLRA1
SREBF1
NR4A1
KDM7A
TRMT2A
RANBP1
NEURL2
CTSA
GNL2
TUFM
SH2B1
NCOA3
KBTBD2
NODAL
NOTCH2NLA
TTC12
BRIX1
RRP8
ILK
THEM4
OBSL1
INHA
DGAT1
USP32
LZTR1
ZSWIM7
TTC19
MTX2
CCNI
TSPAN10
NPLOC4
MYL12B
FAM107B
EPHA10
MAPKAPK3
CISH
RNF11
CCNL1
TTC38
TRDMT1
L1CAM
GCLM
GRHL3
WWC2
NDUFAF6
KIF13A
ZNF165
PCK2
NCOA5
ARL5A
RNF130
MARCHF7
ARL8B
NCKAP1
TBL1XR1
PRMT3
SLC25A45
RHBDD1
TRIB3
AKAP1
NR2F6
DPY19L4
ANKRD46
LYL1
NFE2
DCK
NUB1
KLHL18
KIF9
MARCHF3
OSBPL6
UBE3C
NRL
ZNF592
ZNF697
BARHL1
NBN
SYNRG
CPPED1
ADK
DNAJB12
NBPF1
HEY1
ZKSCAN2
CBFA2T2
SRF
NUF2
AGPS
RAPH1
BPTF
SSNA1
ANAPC2
BICD1
SMARCD2
BUD13
ANKRD28
PLEKHF2
KCTD18
ZNRF2
TBC1D14
POLD1
PLEKHJ1
ZNRF3
KMT2A
PTPDC1
SPATA1
TMEM86A
DENND4B
PIM3
RAB37
RASAL2
CX3CL1
UBE2K
TBC1D13
AXL
DCAF11
IL13RA1
UBE2D2
MAF1
DMTF1
PET117
KAT14
TBC1D5
IKZF5
ACADSB
NOL4L
TSPAN12
KIFC3
HES1
USP9X
ESCO1
WTAP
SOD2
PGRMC2
PARL
KLHL12
SMARCD3
SMURF2
IST1
GATAD2B
CYB5R4
FRA10AC1
ODC1
PKP4
TIGD2
GBA
LANCL2
TARS1
NKD1
SLC25A32
DCAF13
GP1BB
MRPL44
CDK5RAP2
CRLS1
FBXO4
WDR36
TEN1
ACOX1
ETV4
ASPSCR1
MAPK1
CTCF
PPP1R3C
MOB1B
FASTKD1
RNF166
MIA2
CTU2
KANK2
ATF3
SLC39A3
RICTOR
MEMO1
ABCC6
PHACTR4
HNRNPUL1
ENOSF1
NDE1
MARF1
NIPSNAP2
USP22
GET4
ZNF641
ITGB1
NUP107
RAN
DCAF10
MAML3
KMT2C
ICE2
FGFR4
PLEKHA7
NDUFA4
ATP7A
ZNF354A
PPP5D1
CALM3
SGK1
TMEM87B
PICALM
GIPC1
VDAC1
METTL9
MSH3
DHFR
DNAH14
TTC3
H6PD
RALGDS
ARFGAP2
DSTYK
ARSB
AHCY
CRKL
HEATR1
RBM18
MRRF
ADGRG3
KMT5B
SFT2D2
FAM102B
SLC35E2B
CDKN2AIP
MIF4GD
DHX40
TCF12
SEPTIN9
RNF19A
DEAF1
STX18
ID3
CHGB
PAFAH1B1
RDX
CEP135
MEFV
ZBTB40
TCTEX1D4
NAMPT
GNG5
GLTPD2
MAPK8IP2
NDUFS7
TEAD4
AFF4
BCAP29
UBN2
RNF139
KIAA0232
RBMS1
ABLIM1
USP47
GTDC1
IMPDH2
SNX18
FKBP9
ZC2HC1C
TRIOBP
ACYP1
NUDCD3
TMEM51
ZNF713
NAT8
YTHDF1
SLC1A4
ATXN2
PRC1
PHF3
PDCL3
RFT1
NOM1
GPT2
GAB1
PPCDC
PIGP
MARCHF5
CPEB3
CAPRIN2
PPP1R13B
SGK3
LAPTM5
GMEB2
DTD2
TEFM
RNF32
SUN2
RUSC2
CDKN2AIPNL
PXT1
KCTD20
NDRG2
GCFC2
E2F6
BTBD19
TOE1
MUTYH
C7orf26
TIPARP
PTP4A2
ATP5MPL
UNKL
OXR1
TENT4A
ZNF451
SOWAHC
SEPTIN10
PRR5
KDM3A
ZNF76
MYADM
TCAF2
SP3
ILKAP
WDR62
THAP8
SRRM3
TLK1
STAT1
KPNA7
TPM1
SLBP
NCOA4
CLPX
AGO2
SYDE2
EBAG9
PURA
RRAS
OPN3
CHML
BOD1L1
VPS29
SLC25A13
RAD9B
LSM2
UBAC1
STAT3
POLD4
SMAD3
PPP1R12B
MAMSTR
EPS15
LARP1
REEP5
POLE3
HEXB
C9orf43
GSE1
PRRT1B
SH3BP4
RRP1B
HSF2BP
THAP12
GVQW3
SRD5A3
LMO7
HDDC2
COX20
AFG3L2
WIZ
ZNF48
SIL1
KTN1
S100A2
PIGO
CABIN1
SLC25A10
GABPA
ATP5PF
ZNF787
DVL3
CTDP1
SFSWAP
DYRK3
PPP1CB
ARID1A
NBPF12
DST
FOXK2
KLHL5
DONSON
CTDSP2
SNAP25
ZNF34
KLF4
TCTE3
ERMARD
DUSP9
NOL7
ZER1
NRSN2
NBPF11
RRAGC
MCUR1
RABGGTA
NLE1
CHIC2
SEC14L1
GFI1B
MDM2
IFRD2
PHTF1
RASSF10
DDIT4
NFAT5
DAGLB
LDLR
KIAA1586
CCDC7
OSMR
PANK2
CLCF1
CARNMT1
MAPK6
USP31
IRF9
ATL3
SOCS2
DDX39A
MCM7
COQ2