ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499856 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◣ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
HDX
IQSEC3
HTR5A
XKR7
ENOSF1
GLRA1
CELSR3
EPHA10
CPLX2
ATL3
RAB37
L1CAM
SNAP25
ZFR2
MAPK8IP2
HPCA
PRLHR
BARHL1
ZCCHC7
NTSR2
TRIM44
LEMD3
ZFYVE27
ABCA3
SHISAL2A
EVI5
SST
MTRNR2L2
VPS29
RAD9B
ZNF354C
UPB1
LAMP1
COPS8
CYB5R4
MARCHF4
HES6
WDR36
RFC1
STMN3
ACTL6B
CPNE9
PRUNE2
OPRM1
CYP2R1
PTPRS
SLC39A3
NPPB
NEUROD4
LHFPL5
ZNF280D
CELF6
DHX40
UNC80
CEP295
GPR26
GCK
STOX2
PMEPA1
PTP4A2
PCNA
NEFH
DDX25
PDE4C
TOMM5
FAM111A
DYRK4
RASSF10
ZSCAN30
ASCL2
TMEM185B
GABRG2
GRM2
KHSRP
DCHS2
FBRS
XKR4
GJA10
KLHL35
DNAH14
RHBDD1
RAX
PTPRN
NEK3
SRRM3
NOC3L
CNTLN
CACNG3
HHIPL1
CCDC85C
SMC1B
RIBC2
SLC12A5
EIF2B3
RANBP3
PRKAB2
CHD1L
ACSS1
SCGN
TRIM59
HENMT1
UTP11
RNF130
HDAC2
FOXRED2
KCNK12
UCN
CCDC92B
VGF
OGDHL
AP3B2
KCNB1
VSTM2B
CACNA1B
SPDYA
ODC1
PDE1C
HS3ST2
SCG3
TDRD5
CHGB
HNF4G
H4C11
EZR
ZIK1
SRP19
PPM1N
PPP1R3D
FAM217B
TTYH2
HCRT
KDM3A
ITPRIPL2
PPP1R3C
E2F6
WDR74
USP14
HBQ1
DIABLO
CRH
GPR78
SRRM4
CPQ
H2BC12
H2AC12
IKZF3
SEH1L
BICDL1
MANEAL
CDIP1
CKLF-CMTM1
CKLF
PKDREJ
CCNL1
BMP4
SFRP4
NEXMIF
ZNF75A
TIGD7
GLYATL1
ZBTB32
NADK2
RNF32
AIP
STEAP1B
ARFGAP3
CARTPT
PGRMC2
GPR158
H4C9
RPH3A
RRP1B
HSF2BP
TBX10
TRIM26
CCDC88C
MARCHF11
GET4
DDX56
GLS2
C3orf14
MCM6
CTXN2
DIO3
SIRT4
CHRNB2
CHGA
RPP25
FZD4
TASOR
GPR6
TPH2
UGT8
ZCWPW1
MEPCE
DNAJC6
PRDX1
ZNF292
GRM1
SRSF7
CDK5RAP3
RAMAC
FZD9
H2BC5
SYT5
SLC35F4
NSG2
RPL14
CCDC92
PLLP
COPS7A
SOX30
UBE2Q1
RTN2
B3GALNT1
STAG3
GPC2
FAM221A
TUBGCP3
ZNF131
ASNS
EIF5A2
CCT2
KCNC1
SPHK1
DNMT3A
ZNF501
VWC2L
BEST1
FAM185A
H4C12
SUGCT
MPLKIP
SLC6A11
GABRD
H4C15
H4C14
RBM18
MRRF
KPNB1
INPP5F
KLF9
PRR3
GNL1
MOB4
TAF7
TDRD10
SHE
CLDN11
WASHC2A
TRIM14
SLC9A2
ZNF148
POLE4
C10orf88
GRIA2
CXCL5
TACSTD2
TSEN54
CASKIN2
LRRC8B
DR1
RPL13A
ZNF485
ATIC
UBE2G2
STK25
ADNP
CCDC169-SOHLH2
CCDC169
FAM184B
CCNI2
NHLRC1
POLDIP3
ZNF239
H4C6
AVPR1A
NOP14
GRK4
CDC16
ERVMER34-1
FJX1
PIP5KL1
CCNB1
MESP2
UBE2D3
CISD2
SKA3
MRPL57
MGA
SYCE2
VCL
ORC2
H2AC11
H2BC11
NDUFAF2
ERCC8
MTHFD2
TMED1
BCL7B
PPIA
H4C4
H1-2
RAB4A
PMVK
NRXN1
H2BC9
SLC6A4
H4C3
RRN3
CLCN7
CHEK1
SNX14
EGR2
AGPAT5
CETN3
AKAIN1
JMJD1C
PANK2
EFCAB13
SIGMAR1
CALB1
MTIF2
L3HYPDH
JKAMP
ITFG2
RAD50
TEX30
IRAK3
CALM2
GCFC2
TMX3
CCDC102B
H3C2
SMPDL3A
HNRNPR
CASC3
ARL14EP
ZNF420
SYNJ1
CASD1
ERBIN
FANCA
ZFP30
MTF2
EBAG9
THUMPD3
ERCC6L2
CNTRL
C5
H2BC4
H2AC6
EXOSC3
RAB11FIP1
EEF1A1
ALDH3A1
CNBP
LUC7L
FRG1
SKIL
SIRT1
MLLT11
CDC42SE1
FDXACB1
C11orf1
KCTD11
STAM2
SERPINE1
RBPJ
OLFM2
PPP6R1
RNF103
TRIB1
MTRNR2L8
PPP1R13L
POLR1G
LPCAT3
MIPOL1
ID1
GNB2
DNAJB2
LRP12
BMPR2
SMAD7
DHRS3
CCDC88A
EXOC2
EP400
UAP1
NDUFAB1
ZNF341
LRRC37A3
ZNF595
ATAD2
TMEM9
CAPS2
RCL1
ZNF664-RFLNA
ZNF664
RCOR3
MRPL2
KLC4
MDC1
CLTC
VDAC2
RNF213
SLC45A4
MTHFD1L
USP42
PLEC
TGIF1
SLC7A6
COL7A1
KLF10
BRWD1
TMEM222
MRPL38
OPLAH
AIFM2
BRPF1
PLK3
LRP6
SPIN1
DRAP1
C11orf68
SLC44A1
FBXL13
ARMC10
DGAT2
P2RX6
BAMBI
NTMT1
ADAM17
JRK
HPN
OTUD7B
RWDD1
ZBTB45
PLOD2
ARL6IP1
HERPUD2
KDM1A
ITPK1
CTNNB1
H2AZ2
USPL1
HMGB1
GZF1
LARS2
ZC3H6
PIM1
NFKBIA
TNFRSF12A
CCPG1
C15orf65
SMAP1
ACVR1
ALKBH7
FSTL3
TAGLN2
NOTCH2NLC
CD8A
GSDMD
NUTF2
MAP3K4
KRAS
CENPT
SERPINB1
BHLHE40
FLOT1
WDFY1
ANKS4B
NR1D2
NKIRAS1
CALM1
LOC100287896
LIPT2
E2F3
MET
ACACA
RNFT1
PRAME
HIBADH
UBE2B
CDKL3
POLR2J3
RFX1
SPACA6
KANSL3
CTSL
SLC39A13
SERPINB6
ARL4A
XRRA1
SPCS2
SLC20A1
HPCAL1
TUBG1
RETREG3
FOXJ3
MRPL40
HIRA
ZBTB38
ADAP1
ATXN7L2
SSBP2
SREBF1
NR4A1
KDM7A
TRMT2A
RANBP1
ZBTB4
SARAF
POLR2A
NEURL2
CTSA
GNL2
TUFM
SH2B1
NCOA3
KBTBD2
NODAL
NOTCH2NLA
TTC12
BRIX1
RRP8
ILK
THEM4
OBSL1
INHA
DGAT1
USP32
LZTR1
CCN2
NDRG1
ZSWIM7
TTC19
MTX2
CCNI
TSPAN10
NPLOC4
MYL12B
FAM107B
MAPKAPK3
CISH
RNF11
TTC38
ACSL3
TRDMT1
GCLM
GRHL3
WWC2
NDUFAF6
KIF13A
ZNF165
PCK2
NCOA5
ARL5A
MARCHF7
ARL8B
NCKAP1
TBL1XR1
PRMT3
SLC25A45
TRIB3
AKAP1
NR2F6
DPY19L4
ANKRD46
LYL1
NFE2
DCK
SLC16A1
NUB1
KLHL18
KIF9
MARCHF3
OSBPL6
UBE3C
NRL
ZNF592
ZNF697
NBN
SYNRG
CPPED1
ADK
DNAJB12
NBPF1
HEY1
ZKSCAN2
CBFA2T2
SRF
NUF2
AGPS
RAPH1
BPTF
SSNA1
ANAPC2
BICD1
SMARCD2
BUD13
ANKRD28
PLEKHF2
KCTD18
ZNRF2
TBC1D14
POLD1
PLEKHJ1
ZNRF3
PIK3R3
KMT2A
PTPDC1
SPATA1
TMEM86A
DENND4B
PIM3
RASAL2
CX3CL1
UBE2K
TBC1D13
AXL
SLC7A5
ZNFX1
DCAF11
IL13RA1
UBE2D2
MAF1
DMTF1
PET117
KAT14
TBC1D5
FAM168B
IKZF5
ACADSB
NOL4L
TSPAN12
KIFC3
HES1
USP9X
ESCO1
WTAP
SOD2
PARL
KLHL12
SMARCD3
SMURF2
IST1
GATAD2B
SECISBP2
FRA10AC1
PKP4
TIGD2
GBA
LANCL2
TARS1
NKD1
SLC25A32
DCAF13
SETD5
GP1BB
MRPL44
ERRFI1
CDK5RAP2
CRLS1
SLX1B
SLX1A
FBXO4
BOLA2B
BOLA2
TEN1
ACOX1
ETV4
ASPSCR1
TMEM242
MAPK1
CTCF
MOB1B
FASTKD1
RNF166
MIA2
CTU2
KANK2
ATF3
RICTOR
MEMO1
ABCC6
PHACTR4
HNRNPUL1
NDE1
MARF1
SRSF6
NIPSNAP2
USP22
ZNF641
TMBIM6
ITGB1
NUP107
RAN
DCAF10
MAML3
KMT2C
ICE2
FGFR4
PLEKHA7
NDUFA4
ATP7A
ZNF354A
PPP5D1
CALM3
SGK1
TMEM87B
P4HA1
PICALM
GIPC1
VDAC1
METTL9
MSH3
DHFR
TTC3
H6PD
RALGDS
RNF220
ARFGAP2
DSTYK
ARSB
AHCY
CRKL
HEATR1
VPS26C
ADGRG3
KMT5B
SFT2D2
FAM102B
SLC35E2B
CDKN2AIP
MIF4GD
TCF12
SEPTIN9
RNF19A
DEAF1
STX18
ID3
PAFAH1B1
RDX
CEP135
MEFV
ZBTB40
TCTEX1D4
NAMPT
GNG5
GLTPD2
LIMS1
NDUFS7
TEAD4
AFF4
BCAP29
UBN2
RNF139
DNAJB1
KIAA0232
RBMS1
ABLIM1
USP47
GTDC1
IMPDH2
MAT2A
SNX18
FKBP9
ZC2HC1C
TRIOBP
ACYP1
NUDCD3
TMEM51
ZNF713
NAT8
YTHDF1
SLC1A4
ATXN2
PRC1
PHF3
PDCL3
RFT1
NOM1
GPT2
GAB1
PPCDC
PIGP
MARCHF5
CPEB3
CAPRIN2
PPP1R13B
SGK3
LAPTM5
GMEB2
DTD2
TEFM
TTI2
SUN2
RUSC2
CDKN2AIPNL
PXT1
KCTD20
NDRG2
BTBD19
TOE1
MUTYH
BOLA2-SMG1P6
C7orf26
TIPARP
ATP5MPL
UNKL
OXR1
TENT4A
ZNF451
KDSR
SOWAHC
SEPTIN10
PRR5
ZNF76
MYADM
TCAF2
FAM3C
SP3
ILKAP
WDR62
THAP8
NAGK
TLK1
STAT1
KPNA7
TPM1
HNRNPH1
SLBP
NCOA4
CLPX
AGO2
SYDE2
PURA
RRAS
OPN3
CHML
BOD1L1
SLC25A13
SERTAD2
LSM2
UBAC1
STAT3
POLD4
SMAD3
PPP1R12B
MAMSTR
EPS15
LARP1
REEP5
POLE3
HEXB
C9orf43
GSE1
PRRT1B
SH3BP4
THAP12
GVQW3
SRD5A3
CYP20A1
LMO7
HDDC2
COX20
AFG3L2
WIZ
ZNF48
SIL1
KTN1
S100A2
PIGO
CABIN1
SLC25A10
GABPA
ATP5PF
ZNF787
DVL3
CTDP1
SFSWAP
DYRK3
PPP1CB
ARID1A
NBPF12
DST
FOXK2
KLHL5
DONSON
CTDSP2
ZNF34
KLF4
TCTE3
ERMARD
DUSP9
NOL7
ZER1
NRSN2
NBPF11
RRAGC
MCUR1
RABGGTA
NLE1
CHIC2
SEC14L1
GFI1B
WSB1
MDM2
IFRD2
PHTF1
DDIT4
BAIAP2
NFAT5
DAGLB
LDLR
KIAA1586
CCDC7
OSMR
SRSF3
CLCF1
CARNMT1
MAPK6
USP31
IRF9
SOCS2
IVNS1ABP
DDX39A
MCM7
COQ2
AP4M1
TOB1
ESYT2
SRCAP
LOC730183
ANKRD36
PSMD14
HDAC6
ATR
HECTD1
VOPP1
LBX2
TXNDC11
TGFB1
SEC24C
XPOT
UBE2F
POMZP3
ANK1
MED23
ACOX3
HCFC2
GLT8D2
FCHSD2
RNPS1
ZZZ3
FAM162A
CCDC58
BCR
TTLL4
OSGIN2
ZNF609
RMDN2
DCAF7
ZBTB20
UBQLN1
TRIAP1
MACROH2A1
UBR4
PRELID3A
ATP5F1E
TRPC4AP
UBE2Z
TEAD1
NR1D1
SNX25
KAT6A
HSP90AB1
ZSCAN31
ROCK2
ENO3
NOTCH2
FGD4
FAM227B
DTWD1
SLC35E2A
PLEKHM3
SPPL2A
LENG8
CCDC59
EIF2AK1
GBE1
B4GALT7
BCL2L11
RSAD1
NAB2
C1GALT1
ALDOA
ELK4