ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499855 | iPS cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◣ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
XKR7
HTR5A
IQSEC3
HDX
RAB37
ENOSF1
SNAP25
CPLX2
EPHA10
ATL3
MAPK8IP2
CELSR3
GLRA1
L1CAM
VPS29
RAD9B
NEFH
SST
BARHL1
ZFR2
HPCA
PRLHR
NTSR2
LEMD3
MARCHF4
CPNE9
CELF6
DHX40
OPRM1
CYB5R4
ZFYVE27
NEUROD4
WDR36
RANBP3
TRIM44
SLC12A5
ANK1
SHISAL2A
CEP295
PRKAB2
CHD1L
SLC39A3
GPR26
EVI5
CYP2R1
UPB1
NPPB
RHBDD1
PTP4A2
HES6
SRRM3
STOX2
PTPRS
ZNF75A
TIGD7
KCNH6
ABCA3
PDE4C
CHRM4
SCGN
HHIPL1
CCDC85C
HCRT
STK25
PCNA
COPS8
ZCCHC7
RTN2
TMEM179
ZNF354C
GPR78
HES3
KCNK12
GRIA2
KCNC1
UNC80
DYRK4
LCLAT1
CADPS
WDR74
ASCL2
ZIK1
ZNF280D
NOC3L
CPQ
SCRT1
LAMP1
E2F6
HS3ST2
CCDC92B
IKZF3
KDM3A
SVOP
GPR6
SLC35F4
NRXN1
CHGB
CHRNB2
CDC16
GCK
ARFGAP3
GRM2
KCNB1
FZD9
RFC1
BMP4
OGDHL
DDX25
H4C3
MANEAL
XKR4
TMEM268
SOX30
ZCWPW1
MEPCE
CACNG3
PRUNE2
MARCHF11
TACSTD2
TSEN54
CASKIN2
USP14
SKA3
MRPL57
B3GALNT1
VGF
DIABLO
UCN
ODC1
ANKHD1-EIF4EBP3
ANKHD1
VSTM2B
CACNA1B
PKDREJ
SLC34A2
UGT8
VWC2L
GABRG2
KLHL35
PMEPA1
NEK3
ITPRIPL2
ACTL6B
NEXMIF
CARTPT
TMEM185B
GJA10
PTPRN
TRIM59
UTP11
SFRP4
COPS7A
GET4
SRP19
TPH2
RAX
STMN3
CPD
H4C9
RNF130
HNRNPR
NPDC1
TEX30
CDIP1
GUCY1A2
MAPK8
HBQ1
LHFPL5
FAM221A
PLCH2
EFHD1
ZBTB32
MLLT11
CDC42SE1
CRH
STXBP2
CACNG2
EIF5A2
FAM163B
SMC1B
RIBC2
TUBGCP3
EIF2B3
SYT5
CALM1
RNF32
LACC1
CCDC122
KLF9
RRP1B
HSF2BP
TASOR
TDRD5
MCM6
GABRD
SLC6A5
GRM6
FBRS
DRD2
H4C11
BICDL1
E2F3
MIPOL1
H2BC8
H2AC8
MSH5
LRIT2
PGRMC2
OXT
STAG3
GPC2
CCDC92
CKLF-CMTM1
CKLF
H3C6
C10orf88
CPNE4
ZNF239
PPP1R3C
DCHS2
GPR158
HDAC2
AIP
LHFPL3
SPHK1
ATP6V1B2
PSMD7
CHGA
MEX3D
AK2
XKR9
LACTB2
TMEM121B
IRAK3
H1-2
ATP2A1
MTHFD2
FOXRED2
C3orf14
TBX10
RPH3A
GSX1
POLDIP3
ISM1
FAM111A
H4C12
JMJD1C
DUT
ADNP
CERS6
H4C6
BCL2L10
EXD1
CHP1
PLLP
MMP24
GDAP1
H3C2
KHSRP
PRKAR1B
CCDC71L
ARHGAP45
SCAMP5
ZNF566
PGBD2
GRM1
NME6
ANKRD34C
FAM184B
CTNNB1
RXFP3
SLC25A13
DNMT3A
HDAC4
H4C8
HNRNPH1
FAM185A
RNF212
MKLN1
TMED1
SIRT4
DNER
COA7
LMCD1
PMS2
AIMP2
CCDC126
EPM2A
AP3S2
DNAJC6
EGR2
STEAP1B
ZNF148
ZC3H6
SRSF7
RASSF10
GTF2H2C
GTF2H2C_2
H4C15
H4C14
H3C13
H2BC18
USPL1
HMGB1
GCFC2
SEZ6L2
ASPHD1
PPM1N
ZSWIM7
TTC19
PRCC
ARL17B
ARL17A
AKR1E2
GLS2
NOP14
GRK4
MLF1
SPDYA
SIMC1
ICE2
PYURF
PIGY
HERC3
PDE1C
PAQR4
CNTLN
CAPRIN1
SCG3
UBE2I
DNAH14
PGBD5
LRRC8B
RPS6
CETN3
ASCL4
AGPS
TARS3
AP3B2
GTF3A
CISD1
ACSS1
ZNF131
N4BP2
YIF1A
PTDSS1
MTERF3
RBM18
MRRF
LAP3
KPNB1
THUMPD3
RPL31
RAB4A
TMEM186
PMM2
THOC3
H2BC4
H2AC6
RPL27A
GORASP2
PPP1R3D
FAM217B
ZDHHC17
SLC6A11
SEH1L
U2SURP
AGBL3
TOMM5
TBC1D15
KCNT2
FJX1
ORC2
CCL28
GDA
AVPR1A
PIK3R3
ACBD6
SYT14
ESYT3
CDCA7
PIP5KL1
TTI2
RPL21
TEFM
EIF1
EFCAB13
PPIA
SLITRK1
TRDMT1
EPB41L5
RSU1
CBR1
ZNF454
CASC3
DCP1B
URGCP
UBE2D4
LRRC58
PUM2
ANKRD36B
TMEM18
CHEK1
H4C2
EPCAM
VENTX
FBXL13
ARMC10
PTPDC1
FZD4
FBXW4
CFDP1
GRIN1
TCTE3
ERMARD
CCNC
MPHOSPH6
NUDT15
EXOSC6
VSX1
H2BC12
H2AC12
PSAT1
RPP25
PM20D2
OR1E2
XK
MSL2
ZFP62
POLE4
CCDC146
BCAT2
TRPC7
SRSF10
NT5C
CTDP1
ZNF441
ANKRD18A
TOMM20
MGA
ARHGEF5
HENMT1
PSMG1
KLHL17
IREB2
H2BC5
RBM25
ADRB1
ERRFI1
ZSCAN31
DDX1
USP4
DIO3
TXNDC15
CD8A
MTF2
SECISBP2
LUC7L
SLC25A6
HNF4G
UBFD1
EARS2
PSMD3
MOB4
H2BC15
H2AC15
RBM43
H1-5
NXPH2
H4C13
H3C11
GMCL1
POLR3E
CYP2U1
GZF1
ATF4
RCOR3
PMS1
ORMDL1
SKIL
SIRT1
MTIF2
MTRNR2L2
FDXACB1
C11orf1
KCTD11
STAM2
SERPINE1
RBPJ
OLFM2
PPP6R1
RNF103
TRIB1
MTRNR2L8
PPP1R13L
POLR1G
LPCAT3
ID1
GNB2
DNAJB2
LRP12
BMPR2
SMAD7
DHRS3
CCDC88A
EXOC2
EP400
UAP1
H4C4
NDUFAB1
ZNF341
LRRC37A3
ZNF595
ATAD2
TMEM9
CAPS2
RCL1
ZNF664-RFLNA
ZNF664
MRPL2
KLC4
MDC1
CLTC
VDAC2
RNF213
SLC45A4
MTHFD1L
USP42
PLEC
CALM2
TGIF1
SLC7A6
COL7A1
KLF10
BRWD1
TMEM222
MRPL38
OPLAH
AIFM2
BRPF1
PLK3
LRP6
SPIN1
DRAP1
C11orf68
SLC44A1
DGAT2
P2RX6
BAMBI
NTMT1
ADAM17
JRK
HPN
OTUD7B
RWDD1
ZBTB45
PLOD2
NHLRC1
ARL6IP1
HERPUD2
KDM1A
ITPK1
H2AZ2
LARS2
SNX14
PIM1
NFKBIA
TNFRSF12A
CCPG1
C15orf65
SMAP1
ACVR1
ALKBH7
FSTL3
TAGLN2
NOTCH2NLC
GSDMD
NUTF2
MAP3K4
KRAS
CENPT
SERPINB1
BHLHE40
FLOT1
WDFY1
ANKS4B
NR1D2
NKIRAS1
LOC100287896
LIPT2
MET
ACACA
RNFT1
PRAME
HIBADH
UBE2B
CDKL3
POLR2J3
RFX1
SPACA6
KANSL3
CTSL
SLC39A13
SERPINB6
ARL4A
XRRA1
SPCS2
SLC20A1
HPCAL1
TUBG1
RETREG3
FOXJ3
MRPL40
HIRA
ZBTB38
ADAP1
ATXN7L2
SSBP2
SREBF1
NR4A1
KDM7A
TRMT2A
RANBP1
ZBTB4
SARAF
POLR2A
NEURL2
CTSA
GNL2
TUFM
SH2B1
NCOA3
KBTBD2
NODAL
NOTCH2NLA
TTC12
BRIX1
RRP8
ILK
THEM4
OBSL1
INHA
DGAT1
USP32
LZTR1
CCN2
NDRG1
MTX2
CCNI
TSPAN10
NPLOC4
MYL12B
FAM107B
MAPKAPK3
CISH
RNF11
CCNL1
TTC38
ACSL3
GCLM
GRHL3
WWC2
NDUFAF6
KIF13A
ZNF165
PCK2
NCOA5
ARL5A
MARCHF7
ARL8B
NCKAP1
TBL1XR1
PRMT3
SLC25A45
TRIB3
AKAP1
NR2F6
DPY19L4
ANKRD46
LYL1
NFE2
DCK
SLC16A1
NUB1
KLHL18
KIF9
MARCHF3
OSBPL6
UBE3C
NRL
ZNF592
ZNF697
NBN
SYNRG
CPPED1
ADK
DNAJB12
NBPF1
HEY1
ZKSCAN2
CBFA2T2
SRF
NUF2
RAPH1
BPTF
SSNA1
ANAPC2
BICD1
SMARCD2
BUD13
ANKRD28
PLEKHF2
KCTD18
ZNRF2
TBC1D14
POLD1
PLEKHJ1
ZNRF3
KMT2A
SPATA1
TMEM86A
DENND4B
PIM3
RASAL2
CX3CL1
UBE2K
TBC1D13
AXL
SLC7A5
ZNFX1
DCAF11
IL13RA1
UBE2D2
MAF1
DMTF1
PET117
KAT14
TBC1D5
FAM168B
IKZF5
ACADSB
NOL4L
TSPAN12
KIFC3
HES1
USP9X
ESCO1
WTAP
SOD2
PARL
KLHL12
SMARCD3
SMURF2
IST1
GATAD2B
FRA10AC1
PKP4
TIGD2
GBA
LANCL2
TARS1
NKD1
SLC25A32
DCAF13
SETD5
GP1BB
MRPL44
CDK5RAP2
CRLS1
SLX1B
SLX1A
FBXO4
BOLA2B
BOLA2
TEN1
ACOX1
ETV4
ASPSCR1
TMEM242
MAPK1
CTCF
MOB1B
FASTKD1
RNF166
MIA2
CTU2
KANK2
ATF3
RICTOR
MEMO1
ABCC6
PHACTR4
HNRNPUL1
NDE1
MARF1
SRSF6
NIPSNAP2
USP22
ZNF641
TMBIM6
ITGB1
NUP107
RAN
DCAF10
MAML3
KMT2C
FGFR4
PLEKHA7
NDUFA4
ATP7A
ZNF354A
PPP5D1
CALM3
SGK1
TMEM87B
P4HA1
PICALM
GIPC1
VDAC1
METTL9
MSH3
DHFR
TTC3
H6PD
RALGDS
RNF220
ARFGAP2
DSTYK
ARSB
AHCY
CRKL
HEATR1
VPS26C
ADGRG3
KMT5B
SFT2D2
FAM102B
SLC35E2B
CDKN2AIP
MIF4GD
TCF12
SEPTIN9
RNF19A
DEAF1
STX18
ID3
PAFAH1B1
RDX
CEP135
MEFV
ZBTB40
TCTEX1D4
NAMPT
GNG5
GLTPD2
LIMS1
NDUFS7
TEAD4
AFF4
BCAP29
UBN2
RNF139
DNAJB1
KIAA0232
RBMS1
ABLIM1
USP47
GTDC1
IMPDH2
MAT2A
SNX18
FKBP9
ZC2HC1C
TRIOBP
ACYP1
NUDCD3
TMEM51
ZNF713
NAT8
YTHDF1
SLC1A4
ATXN2
PRC1
PHF3
PDCL3
RFT1
NOM1
GPT2
GAB1
PPCDC
PIGP
MARCHF5
CPEB3
CAPRIN2
PPP1R13B
SGK3
LAPTM5
GMEB2
DTD2
SUN2
RUSC2
CDKN2AIPNL
PXT1
KCTD20
NDRG2
BTBD19
TOE1
MUTYH
BOLA2-SMG1P6
C7orf26
TIPARP
ATP5MPL
UNKL
OXR1
TENT4A
ZNF451
KDSR
SOWAHC
SEPTIN10
PRR5
ZNF76
MYADM
TCAF2
FAM3C
SP3
ILKAP
WDR62
THAP8
NAGK
TLK1
STAT1
KPNA7
TPM1
SLBP
NCOA4
CLPX
AGO2
SYDE2
EBAG9
PURA
RRAS
OPN3
ITFG2
CHML
BOD1L1
SERTAD2
LSM2
UBAC1
STAT3
POLD4
SMAD3
PPP1R12B
MAMSTR
EPS15
LARP1
REEP5
POLE3
HEXB
C9orf43
GSE1
PRRT1B
SH3BP4
THAP12
GVQW3
SRD5A3
CYP20A1
LMO7
HDDC2
COX20
AFG3L2
WIZ
ZNF48
SIL1
KTN1
S100A2
PIGO
CABIN1
SLC25A10
GABPA
ATP5PF
ZNF787
DVL3
SFSWAP
DYRK3
PPP1CB
ARID1A
NBPF12
DST
FOXK2
KLHL5
DONSON
CTDSP2
ZNF34
KLF4
DUSP9
NOL7
ZER1
NRSN2
NBPF11