ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702098 | hESC HUES64
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◣ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
ZNF148
PRKAB2
CHD1L
MTIF2
CCDC92
SKIL
COPS8
ID1
OLFM2
USPL1
HMGB1
LEMD3
SNX18
BMPR2
HNRNPR
ZNF655
STOX2
HERPUD2
FDXACB1
C11orf1
METTL2A
CD8A
RUSC2
SCAF11
HABP4
SPACA6
NUF2
FBRS
WIPF2
SOWAHC
SEPTIN10
STAM2
ZFY
MIPOL1
EP400
UAP1
CCDC88A
CAMK2D
JMJD1C
TRIOBP
RWDD1
ZBTB45
USP47
PRKACB
DGAT2
PAFAH1B1
SLC2A8
SLAIN2
GNL2
BAMBI
CDK5RAP2
LRRC37A3
MDC1
WWC2
H3-3B
ZSWIM7
TTC19
RAPH1
DEGS1
BBS12
NCOA3
EXOC2
GTF2A1
PIGH
RUNX1T1
SSBP2
EIF4A2
CCN2
DRAP1
C11orf68
KRAS
KTN1
ELMOD2
MTHFD1L
SNX14
MARCHF5
CPEB3
ATXN10
SARAF
XKR7
CKAP2
ZBTB4
POLR2A
H4C11
METTL2B
MBD4
IFT122
NOTCH3
USP22
KLF10
ANKRD46
ORC2
DCP1B
EFR3B
RFT1
RPS8
HEATR1
PPP1R13L
POLR1G
ACSL3
ZNF48
DHRS4
REEP5
SMAP1
ZNF697
GGH
RNF11
TEAD1
SLC38A2
SCLT1
C4orf33
MAP3K4
MTX2
SRF
UBN2
HIF1A
MRPL44
MED23
TAB2
SREBF1
RSU1
TAPT1
ARMH4
ACACA
PRC1
LPCAT3
LEPROTL1
HNRNPC
ZNF664-RFLNA
ZNF664
NRAS
ARL4A
ZBTB20
GPR180
PPP2R2A
AVEN
APTX
DNAJA1
TBL2
ZNF354A
FBXW7
FRA10AC1
ST20-MTHFS
BFSP1
TUFM
SH2B1
ZFAND5
TEX9
FRMPD1
RRP8
ILK
HECTD1
DNAJC3
LARS2
SRSF6
B3GLCT
ZNF846
CEP112
C5orf49
POLI
FRMD6
CTNNB1
NUB1
SETD5
RNF32
UBE2S
CAPS2
UBE2B
CDKL3
BICD1
UBE2D2
PMAIP1
RASGEF1B
MSANTD4
UBE2K
BCKDHB
CPLX2
SLC25A32
DCAF13
TGFA
ZCCHC10
SLC44A1
MOB4
TCF12
SMAD9
PRSS47
RBMS1
VKORC1L1
MAP7
AKT3
FXR1
HECTD2
TTC3
PIGP
PDE7A
TSC22D1
FILIP1L
CDC7
SERPING1
TRPM3
GNB2
TNPO1
ZNF654
CGGBP1
ZNF140
ADAMTS18
LRP12
PLK3
CCDC7
UBE2F
SYDE2
DYRK3
PJA2
MINPP1
PGBD1
RB1CC1
ARL14EP
PLAAT1
MAPK6
FAM177A1
CREM
TNRC6A
COPS7A
MRPS31
MECR
RPS3A
MRTFB
SDHA
CCDC127
APMAP
STYX
PROM1
RBSN
ATP2C1
RPLP0
TRDMT1
PDIA3
INKA2
DDX20
CAMSAP2
ASCC3
CPSF6
TMEM222
NOTCH2NLC
CCDC59
FAM53C
CDC25C
FHOD1
LRP6
TBC1D5
AFF1
IKZF3
GTF2H2C
MAP2K3
GTF2H2
KPNA5
DZIP1
SIRT1
CALM1
VDAC1
GAB1
MAP4
INTS10
AFG3L2
WSB1
ADAR
TBPL1
ARHGEF12
MAPK1IP1L
NUCKS1
SNX2
PHIP
SOS2
EED
PARVA
CHN1
ARPC2
MRPL38
CABIN1
CDC42EP3
NRSN1
F11R
METAP1
RGPD6
PAWR
RGPD8
RGPD5
SUPT20H
ANKRD10
KCNB1
ARL15
NRG3
JDP2
UPF3A
PHACTR2
PNMA1
XPO5
POLH
PAQR3
GNAL
ZDHHC20
DCK
UBR4
UFL1
PLCH1
C12orf42
CALM2
TCAF2
PPM1A
DMTF1
TSPAN12
NFATC3
PALM2AKAP2
ABCD3
RB1
FAM222B
OTULINL
ZNF787
TCTE3
ERMARD
NDE1
MARF1
UBE2Z
TSC22D2
YTHDF3
VEZT
FGD6
LOC100287896
LIPT2
PLEKHF2
COX20
THAP4
ATG4B
C18orf21
PCCA
RCL1
CDKN2AIP
PRDX1
CPVL
FAM53A
CAMK4
LRP2BP
ANKRD37
C8orf88
CDK17
PCF11
TXNL4A
RBFA
ELK4
ATAD2B
LAP3
CREBZF
MND1
CNPY1
TNC
LIMS1
CCPG1
C15orf65
HEXB
C9orf40
RIOK3
MARCHF7
TNFRSF21
ERBIN
ARF4
FMNL2
SLC20A1
ZNF76
HCFC2
GLT8D2
MYO1D
OSGIN2
UBE2D3
HNRNPA2B1
CBX3
CISD2
SRSF10
COPS4
TOE1
MUTYH
KIF27
HCN1
PPP1R21
AMOTL1
DPH5
RNF182
NOTCH2NLA
ZC2HC1C
ACYP1
HNRNPH3
PBLD
GCLM
H4C15
H4C14
SRSF3
DTWD2
GOLGB1
PTPRD
MTMR6
ZNF821
FABP5
C7orf31
TIPARP
VCP
NDUFAF6
SLC25A51
ARFGEF1
NSD3
SLC9B2
ITGB1
LNPEP
EFHD1
TCP11L1
PANK2
RAB22A
FOXJ3
SLC11A2
ARPP21
DSEL
BRWD1
WEE1
CTBS
XRRA1
SPCS2
FNDC3B
MAP4K5
ATL1
CLTC
C3orf52
GLO1
THBS1
SLC17A5
CADM2
TSG101
ULK2
ASH1L
ASL
H2AZ2
TOB1
TRIQK
PRIM1
NPAS4
MTRNR2L2
MLLT11
CDC42SE1
KCTD11
SERPINE1
RBPJ
PPP6R1
RNF103
TRIB1
MTRNR2L8
IQSEC3
HTR5A
DNAJB2
SMAD7
DHRS3
H4C4
NDUFAB1
ZNF341
ZNF595
ATAD2
TMEM9
RCOR3
MRPL2
KLC4
VDAC2
RNF213
SLC45A4
USP42
PLEC
TGIF1
SLC7A6
COL7A1
OPLAH
AIFM2
BRPF1
SPIN1
FBXL13
ARMC10
P2RX6
NTMT1
ADAM17
JRK
HPN
TRIM44
OTUD7B
PLOD2
NHLRC1
ARL6IP1
KDM1A
ITPK1
CELSR3
GZF1
ZC3H6
PIM1
NFKBIA
TNFRSF12A
ACVR1
ALKBH7
FSTL3
TAGLN2
GSDMD
NUTF2
CENPT
SERPINB1
BHLHE40
FLOT1
WDFY1
ANKS4B
NR1D2
NKIRAS1
E2F3
MET
RNFT1
PRAME
HIBADH
POLR2J3
RFX1
KANSL3
CTSL
SLC39A13
SERPINB6
MTF2
HPCAL1
TUBG1
RETREG3
MRPL40
HIRA
ZBTB38
ADAP1
ATXN7L2
GLRA1
NR4A1
KDM7A
TRMT2A
RANBP1
NEURL2
CTSA
KBTBD2
NODAL
TTC12
BRIX1
THEM4
OBSL1
INHA
DGAT1
USP32
LZTR1
NDRG1
CCNI
TSPAN10
NPLOC4
MYL12B
FAM107B
EPHA10
MAPKAPK3
CISH
CCNL1
TTC38
L1CAM
GRHL3
KIF13A
ZNF165
PCK2
NCOA5
ARL5A
RNF130
ARL8B
NCKAP1
TBL1XR1
PRMT3
SLC25A45
RHBDD1
TRIB3
AKAP1
NR2F6
DPY19L4
H4C12
LYL1
NFE2
SLC16A1
KLHL18
KIF9
MARCHF3
OSBPL6
UBE3C
NRL
ZNF592
BARHL1
NBN
SYNRG
CPPED1
ADK
DNAJB12
NBPF1
HEY1
ZKSCAN2
CBFA2T2
AGPS
BPTF
SSNA1
ANAPC2
SMARCD2
BUD13
ANKRD28
KCTD18
ZNRF2
TBC1D14
POLD1
PLEKHJ1
ZNRF3
PIK3R3
KMT2A
PTPDC1
SPATA1
TMEM86A
DENND4B
PIM3
RAB37
RASAL2
CX3CL1
TBC1D13
AXL
SLC7A5
ZNFX1
DCAF11
IL13RA1
MAF1
PET117
KAT14
FAM168B
IKZF5
ACADSB
NOL4L
KIFC3
HES1
USP9X
ESCO1
WTAP
SOD2
PGRMC2
PARL
KLHL12
SMARCD3
SMURF2
IST1
GATAD2B
SECISBP2
CYB5R4
ODC1
PKP4
TIGD2
GBA
LANCL2
TARS1
NKD1
GP1BB
ERRFI1
CRLS1
SLX1B
SLX1A
FBXO4
BOLA2B
BOLA2
WDR36
TEN1
ACOX1
ETV4
ASPSCR1
TMEM242
MAPK1
CTCF
PPP1R3C
MOB1B
FASTKD1
RNF166
MIA2
CTU2
KANK2
ATF3
SLC39A3
RICTOR
MEMO1
ABCC6
PHACTR4
HNRNPUL1
ENOSF1
NIPSNAP2
GET4
ZNF641
TMBIM6
NUP107
RAN
DCAF10
MAML3
KMT2C
ICE2
FGFR4
PLEKHA7
NDUFA4
ATP7A
PPP5D1
CALM3
SGK1
TMEM87B
P4HA1
PICALM
GIPC1
METTL9
MSH3
DHFR
DNAH14
H6PD
RALGDS
RNF220
ARFGAP2
DSTYK
ARSB
AHCY
CRKL
VPS26C
RBM18
MRRF
ADGRG3
KMT5B
SFT2D2
FAM102B
SLC35E2B
MIF4GD
DHX40
SEPTIN9
RNF19A
DEAF1
STX18
ID3
CHGB
RDX
CEP135
MEFV
ZBTB40
TCTEX1D4
NAMPT
GNG5
GLTPD2
MAPK8IP2
NDUFS7
TEAD4
AFF4
BCAP29
RNF139
DNAJB1
KIAA0232
ABLIM1
GTDC1
IMPDH2
MAT2A
FKBP9
NUDCD3
TMEM51
ZNF713
NAT8
YTHDF1
SLC1A4
ATXN2
PHF3
PDCL3
NOM1
GPT2
PPCDC
CAPRIN2
PPP1R13B
SGK3
LAPTM5
GMEB2
DTD2
TEFM
TTI2
POLDIP3
SUN2
CDKN2AIPNL
PXT1
KCTD20
NDRG2
GCFC2
H4C3
E2F6
BTBD19
BOLA2-SMG1P6
C7orf26
PTP4A2
ATP5MPL
UNKL
OXR1
TENT4A
LUC7L
ZNF451
KDSR
PRR5
KDM3A
MYADM
FAM3C
SP3
ILKAP
WDR62
THAP8
SRRM3
NAGK
TLK1
STAT1
KPNA7
TPM1
HNRNPH1
SLBP
NCOA4
CLPX
AGO2
EBAG9
PURA
RRAS
OPN3
ITFG2
CHML
BOD1L1
VPS29
SLC25A13
RAD9B
SERTAD2
LSM2
UBAC1
STAT3
POLD4
SMAD3
PPP1R12B
MAMSTR
EPS15
LARP1
POLE3
C9orf43
GSE1
PRRT1B
SH3BP4
RRP1B
HSF2BP
THAP12
GVQW3
SRD5A3
CYP20A1
WDR74
LMO7
HDDC2
WIZ
SIL1
S100A2
PIGO
SLC25A10
GABPA
ATP5PF
DVL3
CTDP1
SFSWAP
PPP1CB
ARID1A
NBPF12
DST
FOXK2
KLHL5
DONSON
CTDSP2
SNAP25
ZNF34
KLF4
DUSP9
SRSF7
NOL7
ZER1
NRSN2
NBPF11
RRAGC
MCUR1
RABGGTA
NLE1
CHIC2
SEC14L1
GFI1B
MDM2
IFRD2
PHTF1
RASSF10
DDIT4
BAIAP2
NFAT5
DAGLB
LDLR
KIAA1586
OSMR
CLCF1
CARNMT1
USP31
IRF9
ATL3
SOCS2
IVNS1ABP
DDX39A
MCM7
COQ2
AP4M1
ESYT2
SRCAP
LOC730183
ANKRD36
PSMD14
HDAC6
ERCC6L2
ATR
VOPP1
LBX2
TXNDC11
TGFB1
SEC24C
XPOT
POMZP3
ANK1
ACOX3
FCHSD2
RNPS1
ZZZ3
FAM162A
CCDC58
BCR
TTLL4
ZNF609
RMDN2
DCAF7
UBQLN1
TRIAP1
MACROH2A1
PRELID3A
ATP5F1E
HPCA
TRPC4AP
NR1D1
SNX25
KAT6A
HSP90AB1
ZSCAN31
ROCK2
ENO3
NOTCH2
FGD4
FAM227B
DTWD1
SLC35E2A
PLEKHM3
SPPL2A
LENG8
EIF2AK1
GBE1
B4GALT7
BCL2L11
RSAD1
NAB2
C1GALT1
ALDOA
TMEM184A
PPIA
NFE2L2
GSPT1
MYLIP
SGK2
HEATR5A
GCLC
DCLRE1B
AP4B1
TADA2A
DAB2
PCIF1
AP5S1
ZNF101
DESI2
HINT3
FGA
TMEM19
LIN9
ECH1
FZD5
KAZALD1
BTNL10
GPR160
USP3
GFUS
SESN1
ZCCHC3
GTF2IRD2B
NOCT
MIOS
MSL2
KLF11
ATXN2L