ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PITX2
PMEPA1
NODAL
ZNF664-RFLNA
ZNF664
CCDC92
ETS2
SLC7A5
BMPER
CYP2B6
LAMC3
ID2
SMAD7
LEFTY2
NPM3
FGF8
SNX9
PRKAB2
CHD1L
CAV1
PCNX2
SNX18
STOX2
COPS8
PLAGL1
SKIL
ZNF148
ID1
ARMC9
TMEM63A
LEFTY1
SLC6A15
AGO1
POU5F1
DUX4
PRR14
FBRS
MTRNR2L2
MSH3
DHFR
CNOT3
NEURL1B
JUND
BMPR2
SPACA6
TEAD1
ZFP36L2
GAS2L1
RASL10A
TSPAN9
STAM2
BCL11A
NPFFR2
RFPL4B
ATG9B
MDN1
CEMIP
ALDH7A1
EOMES
WNT3
MRI1
SIRPA
MTRNR2L8
FAM20C
SUPT6H
SDF2
SMARCD1
ASIC1
OLFM2
KLF10
SMAD3
MUC3A
NBL1
DAB2IP
CHST11
ZSWIM4
RNF213
PPP2R2A
FAM178B
TBC1D2
KRT36
KRT13
POU2F3
FOXB1
JUNB
HOOK2
ETS1
LARS2
BUD13
RHOF
SETD1B
SH3GL1
AHCYL2
CHAF1A
NPAS4
ZNF853
DNAJB8
ZSWIM7
TTC19
DPPA4
NOCT
SREBF1
RNF32
LRRC37A3
KAT6A
NEDD4L
IL17RD
FOXJ3
PCED1B
AMIGO2
GALNT9
MAP7
LDLRAD4
NOTCH3
DRAP1
C11orf68
LRP6
EFNB2
MTIF2
MLLT11
CDC42SE1
GAD1
CALD1
WNT8A
FAM184A
GATA4
MTRNR2L1
MARCHF3
ADAMTS5
OCA2
CD8A
NUF2
GRIK2
MMP9
ATP9B
MARCHF5
CPEB3
PRAC2
HOXB13
TRIM56
CER1
RCBTB2
TAF13
CHD2
GTPBP6
JMJD1C
GAB1
RNF212B
DST
CYB561
DCAF10
EP400
USPL1
HMGB1
MTHFD1L
ESRP1
GNL2
MCHR1
RPRM
CCDC88A
NOTCH2NLC
GNB2
MRPS36
LMLN2
ABLIM1
UTS2B
CCDC50
BAMBI
PTGS2
ASNSD1
ASDURF
CD101
NRL
PCK2
TBC1D5
UAP1
RET
ANKRD46
WT1
FRG2
SMAP1
MRPL24
HDGF
HS3ST3B1
NSUN6
ARL5B
MIPOL1
UBN2
E2F3
SNX14
PMAIP1
EML1
NTM
RAPH1
PCCA
ADAMTS1
AFF1
CASP3
TFAP2A
PLPPR3
AZU1
TBX22
BOD1L1
RGPD8
RGPD5
RGPD6
PNMA1
LRRC59
CGB3
LHB
WWC2
MAML3
AFAP1
PLAAT4
ID3
OAZ1
TEAD4
PEAK3
PTPN18
WDFY1
NARF
GIT1
ANKRD13B
CYBC1
GRM1
PCDHAC1
ARL4A
DNAJC6
ZNF609
C3orf52
PTPRN2
SLC20A1
SMIM8
GJB7
ZFYVE16
KANSL1L
CDKN2C
PDE6D
COPS7B
VANGL2
ERCC1
DGAT2
RAB23
BAZ2A
CYB561D1
ATXN7L2
TGDS
GPR180
ZNF521
P2RY2
SHISA8
TNFRSF13C
CBFA2T2
CALN1
NCOA3
FAM168A
RAB35
HTR5A
IKZF5
ACADSB
HINT3
USP47
FEM1C
LHX5
TRDMT1
NFIA
ASCC3
KIF2C
RCAN3
UBL5
FBXL12
MICALL1
ZNF511
TUBGCP2
RANGAP1
ZC3H7B
LEMD3
LOC100287896
LIPT2
SRF
FAM162A
CCDC58
JDP2
MARCHF4
LSM14A
C4orf36
SMYD3
GBX2
OR1E3
XKR7
LMNA
MEX3A
ROR2
PCYOX1
ALAD
SOWAHC
SEPTIN10
POLE3
C9orf43
EMILIN1
KHK
USP15
AMOTL1
SEC22A
SLCO5A1
TSPAN12
PARL
EPN1
XPO5
POLH
OCIAD2
MTRNR2L9
KIF5C
GTF2H2C_2
GTF2H2
PPT1
REEP5
ZC3HAV1
C1GALT1C1L
SIRT6
FAT1
GADD45G
LHX1
FDXACB1
C11orf1
ALG9
SAR1B
MAST4
ZNF775
C9orf40
REST
SLC4A9
PMF1-BGLAP
PMF1
LPCAT3
EPB41L2
PRC1
KDM5B
MTDH
CREB5
BMF
LRP12
TAF10
RRP8
ILK
MRPL39
SYNJ1
FAM227B
DTWD1
MFAP3L
TMEM121B
HPCAL4
TLE1
BCL6
SMPD4
MZT2B
ANKRD18A
RNF103
IFT52
USP37
CNOT9
TULP4
IQSEC3
ERLEC1
ASB3
NRSN1
GGT7
ACSS2
E2F2
OR8B3
MMP8
MMP24OS
MMP24-AS1-EDEM2
ARHGAP28
ZNF358
MCOLN1
IGF2BP3
TLCD5
ZNF839
SLC17A5
LRAT
ZBTB45
ZNF341
SLC27A5
FRA10AC1
TNPO1
TTC39B
HMOX2
ZNF487
NMRAL1
FAM171A2
GRN
REEP6
PCSK4
UROC1
CHST13
PICK1
EIF2B2
NCOA5
STOML2
PIGO
RFESD
MEX3B
BAIAP2L2
CCNH
BCAP31
ABCD1
CDKN2AIPNL
AGO3
GOLGA6L10
AQP2
GLRA3
AVPR1B
RNF11
CRBN
PTBP2
CEMIP2
BPTF
ADGRA1
TMEM250
SHF
RTP3
LTF
MOB4
CDH15
HEXB
CHN2
CPVL
PXK
MNAT1
SLC1A1
CLDN9
TNFRSF12A
THOC6
HCFC1R1
CLDN6
NAV2
LOC728392
UGT1A3
TCEAL8
UGT1A4
RTN4
ERMP1
RNF6
TMEM215
SLC44A1
DCP1A
CXCR5
NCOR2
RWDD1
ACSL3
KLHL18
KIF9
EXD1
CHP1
PINK1
SCOC
LRCH1
CPNE4
PCBP1
MRGPRG
GRID2
CTNNB1
DDIT4
LEKR1
GARS1
TBPL1
EXOC2
USP42
UBE2D2
WBP1L
MYO6
TPI1
SPSB2
CBWD5
CBWD3
ERI1
ZNF395
ZNF197
COL26A1
CCNL1
STX16
CAMSAP2
TMEM132A
PDE1C
GRM2
C5orf34
LAYN
BCR
KIAA1841
POLR3E
SPATA18
MRPL2
KLC4
CUL7
SOCS2
AK3
LRPAP1
PTGER2
OXTR
BRIX1
PPIH
FOSL2
RPGR
MANEA
USP53
FGF1
OPRM1
ROR1
PDE4B
PURA
TBC1D14
ARHGAP26
FXR1
ERBIN
TCF7L1
CECR2
MDC1
TUBB
ZCWPW2
AZI2
FNBP1L
SMIM10L1
PRH1-TAS2R14
ZDHHC23
NUDT2
KIF24
OPN1LW
RFX4
GLIPR1L1
CAPS2
HSP90AB1
VPS28
CERCAM
XYLB
OAZ3
MRPL9
ELMO1
EHD4
HTR1E
LPIN1
BICD1
S100A2
NPIPB9
NTSR2
HMGN2
ZNHIT3
NFE2L3
LAMC2
KLF17
ZNF641
NDRG2
HECTD1
GTF2H2C
AAR2
ARHGEF40
ZNF251
OSBP2
GLS2
GDF7
TRIM65
MRPL38
PIK3R3
VCAN
UBA1
GABRG3
ITGB1
TMEM170A
HEXIM2
SLC24A1
INTS14
MRM3
GLOD4
NGFR
AKAP12
TFAP2D
KBTBD2
ZNF354A
TDG
C12orf73
PDE8A
HDAC2
GADD45B
ST6GAL1
ATP1A4
URM1
EYA3
NMNAT2
CFAP161
NPIPB6
DESI2
NCBP3
ATP23
B3GLCT
MAP2K1
FABP6
HEY2
CDC42EP3
EIF4G1
MARS2
LIG4
ABHD13
BHLHE40
CPLX2
EFHD1
LHX2
TFAP2B
HERPUD2
ELK4
PRDX1
KATNA1
CHD4
HABP4
DNAJC10
MSRB2
IFNGR1
FAM120B
ZFHX3
MEIG1
DCLRE1C
NANOG
CLN6
ZNF385A
ULK2
TTC9
DLL1
NCKAP1L
MAPK15
CCDC166
CCPG1
C15orf65
KSR1
ZNF654
CGGBP1
GNAI2
WNT5A
KIFC3
NUDCD3
FCHO2
PHIP
PRMT5
NIT2
PRMT9
UCHL1
ATAD2
MLLT6
PLEKHM3
VDAC1
GGH
SOX12
AMFR
CBWD6
SIT1
CCDC107
ARHGEF39
NXPE3
FYN
NLGN1
PDE8B
NAALAD2
KCNH5
FRG2C
ZNF165
OR1F12
MCM7
AP4M1
SEC62
METTL2A
AKAP9
TMX3
CCDC102B
FGF19
C12orf42
OR6J1
CHIC2
FLOT2
DHRS13
PET117
KAT14
LIMK2
USP22
ENPP3
MED23
RIPK4
CYP2R1
DOC2A
C16orf92
TUT7
SDHA
CCDC127
TLCD3B
MTARC2
CDK6
PRDM8
DHRS3
ARL6IP1
THAP4
ATG4B
GNAS
IQCH
AAGAB
BTC
EPCAM
KIRREL1
UBE2B
CDKL3
NOTCH2
ESCO1
SLC35E2B
RUSC2
RMDN2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
INTU
TRIM9
PDLIM7
ZC3H6
MTF2
HIVEP2
GTF3C3
C2orf66
L1TD1
SETD7
MDFIC
CYP26B1
CLTC
XRRA1
SPCS2
BAIAP2
TGFA
ZNF860
OSBPL10
PRKAA1
EXOC6B
PRUNE2
FAM151B
MKX
ZNF419
ZNF772
ANKK1
CCNI
NR4A3
LRRC37B
RUBCN
FYTTD1
DMRTA1
AMPH
GPC6
SLC34A3
SLC39A6
RNF224
CDC37L1
RNF208
CYSRT1
SALL2
GATAD2B
UCHL5
RO60
MBOAT2
INKA1
CDHR4
SLMAP
CORO2B
TEKT3
TMEM242
ZNF48
PHTF1
RTKN2
ANKRD12
TOR2A
PPARGC1A
CRYM
FAM222B
SLAMF1
PROSER1
NHLRC3
SYN2
PABPC5
TBL1XR1
TDRD9
ATP5MPL
STX18
TEFM
NRSN2
FAM177A1
COL23A1
C9orf85
PLCH1
RIMBP2
COX6A1
TRIAP1
GNAL
RBM15B
MANF
PDE4DIP
MMP2
TCTEX1D4
PLK3
BTBD19
UBTF
DSTYK
TPD52
PARK7
SKA3
MRPL57
DNAJC3
FGFBP3
KLHL23
RPTOR
HES1
DCP1B
RAD54L2
IL20
TMEM267
PHACTR2
NDUFS3
KBTBD4
FAM180B
FILIP1L
SPEF2
ADAMTS3
SFRP2
IQCF2
FAM153B
RBPJ
TAF12
UNC45B
NLE1
SPAST
ANKRD50
SLC30A5
CCDC71L
OR2AT4
DNAJC19
CYP2U1
SLC44A2
NOTCH2NLA
METTL9
DYRK3
C8orf37
SLC35A3
FAM98B
MTMR6
MPZL1
SPOP
UROD
HECTD3
LLPH
AFF4
EBAG9
ASAP3
TMEM263
SUMF2
EEF1AKMT1
EXD2
SOWAHA
CALB1
EPHA1
FAM221A
NKX1-1
NFKBIA
STMN3
RTEL1
MAP3K4
KTN1
ADNP
SIK2
ZWILCH
SNAPC5
RPL4
BORCS6
FAM107A
HNRNPR
TIPARP
AMN1
BLMH
GALNT15
HCN1
KDM6B
CALM2
KANSL3
FER1L5
TMEM37
AFG3L2
ATAD2B
NAA40
STEAP3
CRYBG1
HTR7
PAK1
IZUMO1
CCDC69
CDKN2A
GNG3
BSCL2
FUT1
FGF21
CNTN4
SCAF11
SST
F11R
CEP192
SEPSECS
DDHD1
ARIH1
SLC2A9
TSTD1
NAT8L
KRT82
KCNQ3
RBMS1
PAWR
SCAPER
MND1
FUT8
EBF2
PPP1R13L
POLR1G
TGIF1
AMOTL2
NR1H3
ACP2
KCNH1
DUSP15
PSMD8
MUC12
LYRM1
DCUN1D3
C15orf40
SLC7A8
DLX6
CTSL
CRYAA2
CRYAA
SOCS3
FKBP5
ARMC12
HIPK1
INTS12
GSTCD
GAREM1
RCOR2
VDAC2
CCN2
RNF166
CTU2
AIFM3
METTL16
SERPING1
RCL1
POLD1
NOTCH2NLB
ARID2
METTL2B
LONP2
ABCC11
SNTG1
PAFAH1B2
PLAAT1
SEMA6A
ZNF608
PLCL2
FAM83B
MRPL40
HIRA
SSBP2
TSKU
SYDE2
STK17A
TPK1
SEC11A
TJP3
CDX2
VPS18
GEMIN4
B3GALT1
GAD2
TPTEP2-CSNK1E
BEST4
THOC2
AS3MT
VGLL3
IGDCC4
CCKBR
MEF2A
HNRNPA2B1
CBX3
SLC35E1
EIF3A
CHST15
BAZ2B
TTC14
MAP2
POT1
FBXO10
KCNN2
CNTN1
CFHR4
MRTFA