ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

EAPP
CCDC200
WDR74
STX5
ZBTB4
SLC35G6
POLR2A
TMEM107
LOC102724770
DGCR6
PARP16
TSEN34
DUX4
POLDIP3
TAF12
TRPC1
HEXIM1
C12orf65
ZNF143
GTF2A1
APTX
DNAJA1
NUDT15
SLC38A2
MCL1
BTG1
HSP90AB1
KDM4A
PARP2
CCNB1IP1
H4C3
H1-6
RPLP0
GCN1
SRSF7
EIF4G2
PCIF1
ID4
EIF2AK3
DNAJB1
C6orf62
RPL5
FUS
NARF
SRSF3
CYBC1
PABPC1
TEDDM1
GLUL
HERPUD1
LRCH4
FBXO24
STX10
IER2
ZBTB37
GSK3B
H4C12
H4C11
H2BC14
H2AC14
HNRNPH1
TGOLN2
SPTAN1
FAM174C
CIRBP
PRDX1
H3C6
H2BC8
H2AC8
H1-3
CSRNP2
H1-2
CALM1
SLC25A25
KANSL2
MRPL35
IMMT
UQCC3
LBHD1
CSKMT
C11orf98
CCN2
TRA2B
CLSPN
PNRC2
SRSF5
RAB26
TRAF7
RPL3
TMBIM6
KNTC1
SIRT4
UBE2S
OAZ1
MKNK2
HNRNPA2B1
CBX3
MYLIP
FOS
ARL15
SNRNP70
VCL
AFF1
JUNB
NAGK
FSCN1
ANKRD17
ARF4
SETD5
DDAH1
CCN1
RPL13A
RPS11
DUSP1
MICU2
SESN2
SECISBP2
CKS2
VPS26C
ZFAND5
POLR3D
HSPA5
RPS12
FAM168B
TTI2
HSPA1B
PRKRA
PJVK
RPL12
LRSAM1
JPT1
CYTH2
SRSF6
DENND6A
POLG2
DDX5
FAM53C
CDC25C
IER5L
KDSR
MTHFD2
UNK
HMBS
H2AX
H3-3B
DPAGT1
SRSF2
MFSD11
TOB1
HEATR5A
CSE1L
SFPQ
ADAMTS1
ZNFX1
PFKFB3
UBE2Z
UBC
NXF1
TUFT1
ZNF529
ACTL6A
RAD23A
CALR
IER5
FARSA
SOCS1
HEXIM2
ARL6IP1
TRA2A
MAT2B
SKP1
NDRG1
DDX59
COQ10B
ID2
PPP1R35
DNAJC25-GNG10
DNAJC25
ZCWPW1
MEPCE
VAMP1
RPLP1
CTNNB1
JUND
IQCN
CCND3
TAF8
MRPS18B
ATAT1
TMEM18
USP42
SREK1
KIF2C
NUDCD1
H2AZ1
DNAJB14
UBR4
PTPN6
C12orf57
NASP
TMEM258
FEN1
KRT19
KRT15
KMT2E
L3HYPDH
JKAMP
S100A1
S100A13
CHTOP
H2BC15
H2AC15
EEF1A1
DDX1
RPS2
RNF151
TBL3
RPL3L
NDUFB10
MAK16
SIRT1
KLF7
BRD2
ARRDC3
HNRNPC
TNFAIP1
IFT20
UBB
SDCBP
TJP1
EEF2
KAT7
MDP1
CHMP4A
TSSK4
ZNF207
C17orf75
TAF15
TAF1D
C11orf54
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
OAT
MAPK1IP1L
CLTC
LUC7L
FAM234A
GNG14
DHPS
CALM2
AMD1
IFRD1
MBD6
DDIT3
JUN
NABP1
SLC39A10
USPL1
HMGB1
KIF27
MORF4L1
KANK1
MAT2A
UBE2D3
GADD45B
HDAC4
RHOB
RBM14-RBM4
RBM14
PDIA3
LGMN
TM2D1
ZNF865
ZNF524
FIZ1
ZSCAN31
PGAP2
TMSB4X
EIF4A2
RPS20
TAX1BP3
EMC6
WDR1
EMSY
FAM3C
BAIAP2
WSB1
POR
PPIA
GNAS
LBH
ZNF248
PITRM1
RRBP1
SLC3A2
CENPBD1
HDLBP
SEPTIN2
INTS6
H3C12
H2BC17
H2AC17
H1-10
BAMBI
CYP20A1
H2BC21
H2AC21
H2AC20
FTL
ING1
CARS2
C5orf24
RAB13
RPS27
USP48
CENPC
ATF4
PPIL3
NIF3L1
FER
MEX3D
HSPA8
DNAJB5
SMIM14
PARK7
GPR89B
STK17A
LIMS1
TMEM242
ACTB
RBM7
C11orf71
CREBZF
GADD45G
PCNA
CDS2
TMEM230
GAPDH
FN1
SERTAD2
TUBB4B
STPG3
FAM166A
YWHAQ
PLAG1
CHCHD7
SLC35C2
AMOTL2
H4C2
H3C2
H2AC4
TNRC6B
ARSD
YTHDC1
GTPBP8
ARIH1
PLK2
EIF5
LUZP1
BBC3
RBM12
CPNE1
UBAP2
SARAF
PPP1R15A
ARHGEF7
PLEKHA4
WAC
CBX5
HNRNPA1
EIF1
ZNF326
LUC7L3
ISCA1
STMN1
CYB561D1
ATXN7L2
HNRNPAB
P4HA1
TSC22D1
THAP5
DNAJB9
RCC1
IL6ST
AKIRIN2
JMJD1C
TSPYL2
TMEM263
MAP3K2
RUSF1
SLC7A5
ERRFI1
TPI1
SPSB2
SDHAF2
CPSF7
AP2S1
ARHGAP35
UAP1
UHRF1BP1L
SLC16A1
PIK3R3
CAMSAP2
ZNF24
EHD1
MPP5
RBM25
DDX50
FAM200B
FRS2
FDXACB1
C11orf1
ALG9
NREP
TP53BP2
ZC3H10
RPL41
POMZP3
FEM1C
KIF5B
PTPN14
ACSL3
DAB2
CELSR3
HNRNPA0
NFKBIZ
GPN2
ARHGAP19
GPATCH3
PAIP2
SPTSSA
CCNG1
H2BC11
H2AC11
H4C9
CNN3
H3C4
H4C4
H2BC6
H2BC12
H2AC12
CDK12
CCT2
DESI2
CCNT2
C19orf48
USO1
H2BC5
H1-4
MMADHC
TUBA1C
IVNS1ABP
USP40
POLR2J3
PHRF1
AZIN1
PDCD4
MRTFA
HMGA1
ZC3H6
MATR3
NBEAL1
CCNB2
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
HMGN2
ATL2
NFYC
NDEL1
ETNK1
KLHDC2
ABI2
PIK3C2A
ZNF766
TMSB10
TXNRD1
SFR1
SLC36A4
SLTM
SLC20A1
H4C5
H2BC7
H2AC7
TSC22D2
VIM
TPT1
PHACTR2
HNRNPDL
ENOPH1
ID1
MKLN1
SDCBP2
CLU
KRT8
RPS6
XBP1
EXT1
LSM14A
ZNF518A
RPN1
RNF220
ITFG2
COL1A1
ELMOD2
MTRNR2L1
SKIL
PRKAB2
CHD1L
PRR14
FBRS
COPS8
ARID3B
ASIC3
PROC
MTRNR2L2
MSH3
DHFR
PMEPA1
PDXK
FRG2C
NPAS4
DHRS3
ERCC1
SMAD7
ZNF148
AVEN
MTIF2
MLLT11
CDC42SE1
DNAJB2
TMEM95
KCTD11
BHLHE40
XKR7
SYNPO
OLFM2
HOOK2
CRTC1
SERPINE1
STAM2
RBPJ
SEPTIN9
PPP6R1
MTRNR2L8
RNF103
BCKDK
ANXA8L1
ID3
BMF
TRIB1
PPP1R13L
POLR1G
ZNF664-RFLNA
ZNF664
CCDC92
ITGAE
IQSEC3
LPCAT3
ART1
MIPOL1
BIRC7
FRG2
HTR5A
TBC1D22A
NKX1-1
GIP
RNF213
GNB2
FZD5
HPS4
BMPR2
ATAD2
LRP12
FSTL3
BMPER
NOS3
GSDMD
SMAD3
KLF10
F2
KDM6B
LAPTM4B
FAM24A
TRIB3
ACTR3C
PDZK1IP1
HOXA3
CCDC88A
EXOC2
ZBTB45
EP400
SREBF1
NDUFAB1
HOXA4
ZNF341
LRRC37A3
RIPOR3
ZNF595
PDGFB
KRAS
LIN28A
MARCHF3
FCGR1A
INSM2
ANXA8
GLT8D1
TMEM9
GLIPR1L1
CAPS2
MDC1
PDLIM7
KIF5C
ZBTB38
UBE2F
CXXC5
LMNA
RCL1
RCOR3
MRPL2
KLC4
CUL7
FAM25G
FAM25C
MTHFD1L
CLDN14
SCN1B
HPN
DGAT2
OPLAH
H2BU1
H2AW
TUBB
CDK5RAP2
NHLRC1
SLC7A6
NTMT1
RNF144A
VDAC2
SLC45A4
CEMIP2
BCAR1
TAF9
RAD17
AK6
PLEC
RNF19A
RHOQ
ATP6V1E2
P2RX6
TBC1D1
TCTEX1D4
PLK3
BTBD19
DRAP1
C11orf68
CPLX2
APOC2
ZC3H18
TGIF1
PBRM1
IER3
GNL3
FLOT1
COL7A1
BCAP31
ABCD1
TRIM65
MRPL38
BRWD1
TMEM222
MMP20
SPACA6
GP1BB
SLC6A9
RARA
AIFM2
BRPF1
SPATA9
RHOBTB3
ACVR1
ANGPTL4
CAT
LRP6
JRK
SPIN1
PURA
MDM2
MSH6
GLI1
AGPS
LRRC61
SLC44A1
PLEKHA7
FBXL13
ARMC10
ZMIZ1
RBFOX2
TBC1D14
ZC3H3
SLC27A5
PLOD2
C9orf50
FCRLA
PC
KCNN4
ITGB5
RFPL4B
ADAM17
PGLYRP4
SMARCD1
TRIM44
LURAP1L
CFLAR
H2AZ2
TEX46
RGS3
KDM1A
SKI
OSGIN1
PLEKHF2
OTUD7B
RBM8A
NAGLU
HMOX1
PITX2
RWDD1
E2F3
VKORC1
LEMD3
MFSD10
THOP1
SGTA
SEMA7A
MAMDC2
GPT2
CLDN9
WSB2
RELA
GZF1
CCR6
GPC6
SERPINB6
FGFR3
NOTCH2NLA
NBEAL2
CCDC12
TMEM86A
MRPL20
CCNL2
STK11
ST6GALNAC6
HERPUD2
FURIN
ITPK1
TNFRSF12A
THOC6
HCFC1R1
FCGR3A
CLDN6
NKG7
ETFB
CLDND2
PHETA1
CD8A
PIK3IP1
GPR182
KANSL3
SMAP1
FPR3
SF3A3
NRL
TAGLN2
HNRNPR
SH2D6
CAPG
MAN1A2
CANT1
RAP1A
ZFAND2A
LARS2
SNX14
SH3YL1
ACP1
ABLIM1
ERBB3
SLC25A17
FHL3
KIAA0232
NDE1
MARF1
CLIP2
PIM1
NFKBIA
CSPP1
COPS5
ARFGEF2
CCPG1
C15orf65
APOC4
PIK3R1
GRAMD2B
PSPN
ALKBH7
STMN3
RTEL1
TNFAIP2
HPCAL1
PRKAG2
SPRED2
NOTCH2NLC
TTYH3
MOB4
UAP1L1
THAP11
NUTF2
MAP3K4
CENPT
SERPINB1
MUS81
CFL1
TNIP1
TLE1
MACC1
SERPIND1
ARL4A
SYNJ2
INHBE
WDFY1
PON2
TMEM268
NFE2
SLC39A7
RXRB
RING1
HSD17B8
ANKS4B
TUBG1
RETREG3
NR1D2
NKIRAS1
LTBP2
EPB41
FAM53B
ELL
SQSTM1
ASIC1
ADAP1
LOC100287896
LIPT2
PUF60
ECE1
ZSWIM1
TMC7
SPATA25
NEURL2
CTSA
ITLN2
ESRP2
SCRT1
DGAT1
MET
SLC12A5
LRP5L
ACACA
RNFT1
YTHDF1
ZNF76
ARRDC2
CCL16
CCL14
PRAME
TMEM270
TEX45
HIBADH
LPIN1
CDK19
ALAD
S100P
UBE2B
CDKL3
TRIOBP
CSNK1D
CYP26A1
POLD1
RFX1
NEU1
TTC38
PRR35
PKDREJ
NR4A1
NHLRC4
TANGO2
ARVCF
NDST1
C3orf86
RNF168
SLC39A13
SSNA1
ANAPC2
NOL4L
KDM7A
KCNH7
FER1L5
COL5A3
CTSL
GIPC1
UBE2H
PTK2B
NODAL
MTF2
GRAMD1A
ZKSCAN1
DCP1A
PTPRN2
MAST1
SMIM11B
SMIM11A
MIEN1
ASB2
XRRA1
SPCS2
SCRIB
DCLRE1B
AP4B1
HOXA5
FOXJ3
MRPL40
HIRA
SEPTIN5
WEE1
EDARADD
HES1
ASPSCR1
ZER1
CPT1A
MYL12A
SSBP2
MARCHF7
GCLM
CMIP
GLRA1
ENG
LZTR1
HSPB1
ZNF22
TRMT2A
RANBP1
PARP10
GNL2
ADGRG1
IDH1
TUFM
SH2B1
CDC42BPA
NCOA3
MB
TAF10
RRP8
ILK
SDC4
KBTBD2
CCNI
FHL2
RAB37
SLC43A3
RTBDN
FOXP4
ISG15
ASS1
LMO7
MMP9
ZC3H12A
COL18A1
CCR7
TTC12
NR2F6
SMTN
ARHGEF16
FBF1
DNMT3B
RALGDS
KTN1
ARID3A
SAPCD2
NFYB
HDHD3
BRIX1
CDH15
THEM4
OBSL1
INHA