ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499856 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◣ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
NKX1-1
FAM24A
HDX
INSM2
ZC3H18
MTRNR2L1
IQSEC3
HTR5A
DUX4
FRG2C
LOC102724770
DGCR6
MAST1
RTBDN
LIN28A
XKR7
ENOSF1
GLRA1
CELSR3
ART1
EPHA10
TAS1R3
CPLX2
RTN3
ATL3
FRG2
KCNH7
TMEM242
RAB37
SMIM17
L1CAM
MAMDC2
SNAP25
OSGIN1
ZFR2
MAPK8IP2
PPY
HPCA
PRLHR
BARHL1
IL4I1
LHFPL4
ZCCHC7
PHRF1
BSG
CADM3
LPIN1
NTSR2
TRIM44
LEMD3
ZFYVE27
ABCA3
SHISAL2A
SP5
EVI5
COL23A1
EAPP
SST
MTRNR2L2
MSH3
DHFR
VPS29
RAD9B
ZNF354C
UPB1
ZNHIT3
LAMP1
CCDC200
COPS8
DLGAP3
RIPPLY2
CYB5R4
GTPBP6
MARCHF4
HES6
WDR36
RFC1
ATG9B
ABCB8
STMN3
RTEL1
KPNA3
ACTL6B
GFI1
CPNE9
PRUNE2
OPRM1
CYP2R1
PTPRS
SLC39A3
EPN1
NPPB
NEUROD4
SWSAP1
LHFPL5
CLPS
ZNF280D
CELF6
DHX40
UNC80
CEP295
GPR26
KCNN4
C1QL2
DRD4
GCK
MYL7
STOX2
PMEPA1
PTP4A2
PCNA
CDS2
TMEM230
CRYAA2
CRYAA
NEFH
PUS3
DDX25
PRMT8
SIGLEC10
PDE4C
TOMM5
ADAMTS15
FAM111A
DYRK4
SNTG1
RASSF10
ZSCAN30
ASCL2
TMEM185B
GABRG2
CDK5R2
GRM2
SKOR2
KHSRP
DCHS2
PRR14
FBRS
SULT4A1
XKR4
GJA10
KLHL35
DNAH14
RAP1GAP
RHBDD1
RAX
PTPRN
GRIN2C
NEUROD1
NEK3
DLL3
ALK
SRRM3
NOC3L
CNTLN
CACNG3
HHIPL1
CCDC85C
SMC1B
RIBC2
SLC12A5
TAF12
RIPK3
ADCY4
MUC3A
EIF2B3
RANBP3
PRKAB2
CHD1L
ACSS1
RBM28
SCGN
TRIM59
PRRT4
HENMT1
FHL3
UTP11
RNF130
HDAC2
FOXRED2
KCNK12
SLC7A14
UCN
CCDC92B
PTPRH
VGF
OGDHL
AP3B2
TLL1
KCNB1
PAX5
CACNA1B
VSTM2B
DTX1
SPDYA
ODC1
PDE1C
HS3ST2
SCG3
TDRD5
CHGB
HNF4G
TEX45
H4C12
H4C11
H2BC14
H2AC14
EZR
ZNF416
ZIK1
NMNAT2
FBXO41
EGR4
RTN2
PPM1N
VASP
SRP19
SYCP2
PPP1R3D
FAM217B
TTYH2
RPL38
SLC6A17
KCNH4
HCRT
KDM3A
APOLD1
HEPN1
ITPRIPL2
PPP1R3C
E2F6
WDR74
STX5
GIT1
ANKRD13B
CEMIP
USP14
HBA2
HBA1
HBQ1
ASIC3
SIRT6
SLC4A2
CDK5
LINGO1
SPAAR
HRCT1
DIABLO
CRH
GPR78
SRRM4
CPQ
H4C9
H2BC12
H2AC12
TNFRSF9
IKZF3
ZPBP2
SEH1L
BICDL1
CBY3
TTC38
PKDREJ
AHCYL2
MANEAL
ZFP37
SRM
CDIP1
MASP2
TK2
CKLF-CMTM1
CKLF
CCNL1
BMP4
PCSK1
SFRP4
EPDR1
NEXMIF
UBN2
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
TBC1D3J
ZNF75A
TIGD7
ZBTB32
GLYATL1
VIM
NADK2
NTM
RNF32
SHOX2
AIP
SELENOV
STEAP1B
ARFGAP3
CARTPT
PGRMC2
QTRT1
PRG3
H2BC11
H2AC11
B3GNT6
GPR158
RPH3A
CD163L1
RRP1B
HSF2BP
TBX10
TRIM26
AFAP1
CCDC88C
MARCHF11
NPS
GET4
NR4A3
DDX56
TMED4
GLS2
C3orf14
MCM6
HHATL
CTXN2
DIO3
UBE2Q1
CHRNB2
SIRT4
RPP25
CHGA
MFAP3L
FZD4
TASOR
GPR6
TPH2
PITX2
UGT8
FOXJ2
RPEL1
RASL10B
TCHH
PPP1R35
DNAJC6
ZCWPW1
MEPCE
SMAD7
PRDX1
ZNF292
CYTH2
KCNJ14
GRM1
SRSF7
CCDC116
CDK5RAP3
FZD9
RAMAC
RESP18
LMLN2
H2BC5
H1-4
CCND2
SYT5
SLC35F4
NSG2
RPL14
ZNF664-RFLNA
ZNF664
CCDC92
BRSK2
PLLP
COPS7A
SOX30
B3GALNT1
GAL3ST4
STAG3
GPC2
ST8SIA3
FAM221A
TMEM107
TUBGCP3
ZNF131
ASNS
EIF5A2
CCT2
KCNC1
SPHK1
DNMT3A
ZNF501
VWC2L
BEST1
FAM185A
H2BC15
H2AC15
SUGCT
MPLKIP
SLC6A11
GABRD
CD8A
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
RBM18
MRRF
PCGF1
KLF9
KPNB1
DQX1
INPP5F
TLX2
GHSR
GDAP1L1
PRR3
GNL1
TNN
MOB4
ANKLE2
TAF7
PCDHGA1
CLDN11
TDRD10
SHE
WASHC2A
TRIM14
SLC9A2
ZNF148
BMPER
POLE4
C10orf88
GRIA2
TACSTD2
CD37
CXCL5
ACTA1
TSEN54
CASKIN2
LLGL2
IRS1
LRRC8B
DR1
SP8
RPL13A
RPS11
ZNF485
ATIC
UBE2G2
ADNP
STK25
CCNI2
PADI3
FCMR
CCDC169-SOHLH2
CCDC169
FAM184B
NHLRC1
POLDIP3
CYP1B1
ZNF239
H4C7
H4C6
H1-3
AVPR1A
NOP14
GRK4
CDC16
ERVMER34-1
SLC16A8
FJX1
PIP5KL1
DPM2
CCNB1
MESP2
UBE2D3
CISD2
SKA3
MRPL57
SYCE2
MGA
VCL
ORC2
NDUFAF2
ERCC8
BCL7B
MTHFD2
TMED1
PPIA
H3C4
H4C4
H2BC6
H1-2
PCNX3
MAP3K11
PMVK
RAB4A
H3C7
H2BC9
NRXN1
SLC6A4
H4C3
H1-6
RRN3
C3orf80
CLCN7
CHEK1
TRIM15
SNX14
EGR2
AGPAT5
CETN3
AKAIN1
STAT1
LEKR1
JMJD1C
PANK2
GALT
SIGMAR1
EFCAB13
ARID3C
CALB1
MTIF2
L3HYPDH
JKAMP
ITFG2
RAD50
TEX30
IRAK3
CALM2
GCFC2
TMX3
CCDC102B
SIX6
H4C2
H3C2
H2AC4
SMPDL3A
FABP7
HNRNPR
CASC3
NOS3
ARL14EP
ZNF420
SYNJ1
CASD1
FANCA
ERBIN
ZFP30
MTF2
EBAG9
SCAPER
THUMPD3
ERCC6L2
C5
CNTRL
ZC3HAV1
H2BC4
H2AC6
RAB11FIP1
EXOSC3
EEF1A1
ALDH3A1
CNBP
LUC7L
FAM234A
FRG1
SKIL
ARID3B
PROC
PDXK
ID2
DHRS3
ERCC1
SIRT1
AVEN
MLLT11
CDC42SE1
DNAJB2
FDXACB1
C11orf1
ALG9
TMEM95
KCTD11
BHLHE40
JUNB
SYNPO
OLFM2
HOOK2
CRTC1
SERPINE1
STAM2
RBPJ
ID1
SEPTIN9
PPP6R1
MTRNR2L8
RNF103
BCKDK
ANXA8L1
ID3
BMF
TRIB1
PPP1R13L
POLR1G
ITGAE
LPCAT3
MIPOL1
BIRC7
TBC1D22A
GIP
RNF213
GNB2
FZD5
HPS4
BMPR2
ATAD2
LRP12
FSTL3
SLC7A5
GSDMD
SMAD3
KLF10
F2
KDM6B
LAPTM4B
LIMS1
TRIB3
ACTR3C
PDZK1IP1
HOXA3
CCDC88A
EXOC2
ZBTB45
EP400
UAP1
SREBF1
NDUFAB1
HOXA4
ZNF341
LRRC37A3
RIPOR3
ZNF595
PDGFB
KRAS
MARCHF3
FCGR1A
ANXA8
GLT8D1
TMEM9
GLIPR1L1
CAPS2
MDC1
PDLIM7
KIF5C
ZBTB38
UBE2F
CXXC5
LMNA
RCL1
RCOR3
MRPL2
KLC4
CUL7
FAM25G
FAM25C
MTHFD1L
CLDN14
SCN1B
HPN
DGAT2
OPLAH
H2BU1
H2AW
TUBB
CDK5RAP2
CLTC
SLC7A6
NTMT1
RNF144A
VDAC2
SLC45A4
USP42
CEMIP2
BCAR1
TAF9
RAD17
AK6
PLEC
POLR2J3
RNF19A
RHOQ
ATP6V1E2
P2RX6
TBC1D1
TCTEX1D4
PLK3
BTBD19
DRAP1
C11orf68
APOC2
TGIF1
PBRM1
IER3
GNL3
FLOT1
COL7A1
BCAP31
ABCD1
TRIM65
MRPL38
BRWD1
TMEM222
MMP20
SPACA6
GP1BB
SLC6A9
RARA
AIFM2
BRPF1
DUSP1
SPATA9
RHOBTB3
ACVR1
ANGPTL4
CAT
LRP6
JRK
SPIN1
PURA
MDM2
MSH6
GLI1
AGPS
LRRC61
SLC44A1
PLEKHA7
FBXL13
ARMC10
ZMIZ1
RBFOX2
TBC1D14
ZC3H3
SLC27A5
PLOD2
BAMBI
C9orf50
FCRLA
PC
ITGB5
RFPL4B
ADAM17
PGLYRP4
RAB26
SMARCD1
LURAP1L
CFLAR
H2AZ2
TEX46
RGS3
KDM1A
SKI
PLEKHF2
OTUD7B
TRAF7
RBM8A
NAGLU
HMOX1
RWDD1
E2F3
SPTAN1
VKORC1
MFSD10
THOP1
SGTA
SEMA7A
GPT2
CLDN9
WSB2
RELA
GZF1
CCR6
GPC6
SERPINB6
FGFR3
NOTCH2NLA
NBEAL2
CCDC12
TMEM86A
MRPL20
CCNL2
STK11
ARL6IP1
ST6GALNAC6
HERPUD2
FURIN
ITPK1
TNFRSF12A
THOC6
HCFC1R1
FCGR3A
CLDN6
NKG7
ETFB
CLDND2
PHETA1
PIK3IP1
GPR182
KANSL3
CTNNB1
SMAP1
FPR3
SF3A3
NRL
TAGLN2
SH2D6
CAPG
MAN1A2
CANT1
RAP1A
USPL1
HMGB1
ZFAND2A
LARS2
KANK1
SH3YL1
ACP1
ABLIM1
ERBB3
SLC25A17
ZC3H6
KIAA0232
NDE1
MARF1
AMD1
CLIP2
PIM1
NFKBIA
CSPP1
COPS5
ARFGEF2
CCPG1
C15orf65
FAM174C
USP48
APOC4
PIK3R1
GRAMD2B
SRSF6
PSPN
ALKBH7
TNFAIP2
HPCAL1
PRKAG2
SPRED2
NOTCH2NLC
TTYH3
UAP1L1
THAP11
NUTF2
MAP3K4
CENPT
SERPINB1
MUS81
CFL1
PCIF1
TNIP1
TLE1
MACC1
SERPIND1
ARL4A
SYNJ2
INHBE
WDFY1
PON2
TMEM268
NFE2
SLC39A7
RXRB
RING1
HSD17B8
ANKS4B
TUBG1
RETREG3
NR1D2
NKIRAS1
LTBP2
CALM1
EPB41
FAM53B
ELL
SQSTM1
ASIC1
ADAP1
LOC100287896
LIPT2
PUF60
ECE1
ZSWIM1
TMC7
SPATA25
NEURL2
CTSA
ITLN2
ESRP2
SCRT1
DGAT1
MET
LRP5L
ERRFI1
ACACA
RNFT1
UBAP2
YTHDF1
ZNF76
ARRDC2
CCL16
CCL14
PRAME
TMEM270
HIBADH
CDK19
ALAD
S100P
UBE2B
CDKL3
TRIOBP
CSNK1D
CYP26A1
POLD1
RFX1
NEU1
PRR35
NR4A1
NHLRC4
TANGO2
ARVCF
NDST1
C3orf86
RNF168
SLC39A13
SSNA1
ANAPC2
NOL4L
KDM7A
FER1L5
COL5A3
CTSL
GIPC1
UBE2H
PTK2B
NODAL
GRAMD1A
ZKSCAN1
DCP1A
PTPRN2
SMIM11B
SMIM11A
MIEN1
ASB2
XRRA1
SPCS2
SLC20A1
SCRIB
DCLRE1B
AP4B1
HOXA5
FOXJ3
MRPL40
HIRA
SEPTIN5
WEE1
EDARADD
CYB561D1
ATXN7L2
HES1
ASPSCR1
ZER1
CPT1A
MYL12A
SSBP2
MARCHF7
GCLM
CMIP
ENG
LZTR1
ZBTB4
SLC35G6
POLR2A
HSPB1
ZNF22
TRMT2A
RANBP1
SARAF
PARP10
KMT2E
GNL2
ADGRG1
IDH1
TUFM