ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064492 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◣ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PITX2
ROR2
GID4
ATPAF2
SMAD7
SLC7A5
MRPL24
HDGF
SSBP3
DMTN
FGF17
SMARCD3
ETS2
CEP55
TSKU
PMEPA1
SLC35A4
APBB3
CCDC24
BMPER
ELAPOR2
SMARCA5
AGFG2
RAB11FIP3
USP2
APC
TCTEX1D4
PLK3
BTBD19
DIAPH3
TMEM87B
HNRNPM
AFAP1
LOC389199
IDO2
PPP1R15B
MINDY3
ZMIZ1
ZNF792
GSC
EPG5
GATA4
AKT2
TMEM63A
LEFTY1
FXYD6-FXYD2
FXYD6
ARMC7
SLC36A2
PIK3R6
PRDM14
SERHL2
EPSTI1
GPR183
VWA3B
KCNF1
ACSS3
LRTM1
CNNM1
NKG7
ETFB
CLDND2
MYOM1
BCL11B
RFPL4B
BEX3
AXIN2
WT1
LEFTY2
GREB1
SLC1A1
CER1
DACT2
HS3ST1
NODAL
ACOX3
UQCRHL
LAMC3
WDR54
C2orf81
NCR1
CFLAR
GJB3
C2orf74
TOMM20
ID3
CLIP2
CSRNP1
SNRPF
H2BW2
ZNF664-RFLNA
ZNF664
CCDC92
FOXI1
DENND2B
ALOX5AP
SRL
IGF1R
TNFSF14
EFHD2
EOMES
ID1
APOLD1
UMODL1
LAPTM4B
NEURL1B
MTRNR2L8
OVCA2
HIC1
C13orf42
AKAP13
FAF2
RAB33A
AIFM1
ARHGEF4
SPOCK3
RAB17
SAXO2
EFL1
SLC5A3
MRPS6
ADGRG7
APOA4
MTRNR2L2
MSH3
DHFR
NPFFR2
TMEM272
LOC389831
PIP4K2C
TP53TG5
DGAT2
TTC39B
PTPRM
NTN1
ANGPT2
YARS1
S100PBP
ADGRF2
MYT1
ANKDD1A
SETBP1
ZNF558
MARS1
ARHGAP9
SPDYE14
SPDYE10P
SOX21
SACM1L
ZNF683
TTF1
CFAP77
WDR44
CDHR3
MTRNR2L1
HOXD13
EVX2
OPN5
ZAP70
ATP6V1B2
GAD2
CST6
EIF1AD
BANF1
RAI1
SYNDIG1L
TMEM185A
SEMA3E
ITLN2
TMEM86A
GRSF1
AGPAT3
L3HYPDH
JKAMP
NEBL
LBR
CAPN14
COPS8
BEAN1
RUNX1T1
DUX4
NDRG4
FOXN4
ZNF296
GEMIN7
NUAK1
CELA3B
TVP23C
GPR19
ARHGAP39
DECR1
MYO7B
MIXL1
PAX4
KIF5C
NBL1
OR6V1
SLC3A2
PIP5K1B
SLC6A1
PDE2A
LRRC2
TDGF1
SMAD3
RANGRF
ALK
PDZRN3
CELA3A
XPO6
MRPS15
MXD4
OSCP1
DUSP5
ID2
SNX9
ROR1
ZNF587B
EPHB2
ARF1
PLAGL1
PLPP4
TCEA2
GNA13
SOX18
SLC26A7
BMPR2
FOXA2
PRR5L
UBA1
RXRG
TLE2
FLVCR2
HABP2
RP1
PTCHD1
DUS2
DPEP2NB
DDX28
DNAJB2
NRCAM
SPINT2
CRYBA2
TVP23B
CASTOR2
SPATA19
MRPL22
GEMIN5
MDC1
RNF19A
CDK14
CYTH1
CLIP4
SMARCD1
ASIC1
CUEDC1
ARID5B
HSD17B14
MDN1
APOL3
IL17RA
AASDH
LPGAT1
SMAD2
CST5
PKHD1L1
IQCJ-SCHIP1
IQCJ
NDUFB4
SLC8A1
BRD7
CCDC192
TBC1D14
ALG14
ADAP2
PAQR9
EML1
ZNF169
ADPGK
CKM
HOXA1
ANK2
HOXA2
ACSM4
TRIOBP
CAV1
GCNT1
ZBTB18
MST1
RRBP1
FNBP4
SPACA3
SPTAN1
AKR1B15
CTXND1
IL6ST
VIPR2
WDR25
WARS1
LGR5
CFAP410
SLC34A2
FGF5
ZBTB40
FGF1
IL17RD
RNASE9
NOG
CIZ1
FBXO34
SLAMF1
CCRL2
NQO2
IRF2BP1
CALN1
CERS4
IFIT3
NDST2
IKZF4
SUOX
CPE
NANP
HNRNPD
ARSG
TRMT112
PRDX5
PRND
IFNLR1
ZNF608
CD8A
SMYD3
ST3GAL1
ADAMTS18
PAPOLB
DDR2
S100A10
TAGLN2
SAMD5
BDH1
FGFR4
PPFIBP2
VANGL1
TMEM25
USP53
MCAM
CSNK1A1L
ITGB5
ATXN7L3B
POU2F3
CMSS1
FILIP1L
SLC24A2
MTRNR2L6
DHRS3
TCP11L1
SIRPA
RIPOR2
TBCA
MECOM
PPRC1
GLT1D1
APOBEC3D
APOBEC3C
UBAP2
CDC42EP1
ITGB6
SH3BGR
LCA5L
TLN2
PBX2
GPSM3
AGER
KIT
TEN1
ACOX1
MADD
BLOC1S6
ARHGAP28
ABHD4
TMEM225
NOD1
MSMB
MN1
PHLDB2
AIRE
KRT36
KRT13
MYCL
MVB12A
BST2
STING1
MCF2L2
PIK3CG
CFC1
TRIP10
GPR108
APOBEC3F
FAM168A
RBP5
CLSTN3
JUND
C12orf43
AFF3
FAM71A
NAIP
SMAP1
HNF4A
ZNF540
PSKH2
JAG2
GPT2
NRL
PCK2
RPS3A
PCED1B
AMIGO2
ADGB
CHL1
MTHFD1L
RABGEF1
TBX3
DCBLD2
OCLN
ZNF831
PIPOX
ETS1
ZIC2
SBF1
MTRNR2L9
RPS6KA2
GPHB5
CCDC60
VIRMA
TP53INP1
FAM104B
PTAFR
DCSTAMP
ANKFN1
TMEM14B
NAA60
GSTT2B
GSTT2
DDTL
DDT
NUMA1
LRTOMT
PPP1R21
UPB1
APOBEC3G
ATL2
HRK
HEXB
SNX18
UNC50
COA5
STK40
PKIG
SERINC3
SFXN1
KCNIP4
RPRM
SPRR1B
MAP9
GTPBP6
UFSP1
ACHE
NPM3
FGF8
SKAP1
TNRC6B
FOXO3
GPR37
GUCA2A
DUSP29
IGFBPL1
ZNF592
MYC
PHACTR1
ZNF732
PARL
CHD2
STK33
SALL4
RADIL
GJB5
GJB4
FMN2
SORCS2
GREM2
ABCB11
SLC37A4
PARD3
TRAPPC4
RPS25
APLP2
NT5DC4
BAG3
IL12B
OR51M1
AFF4
ZSCAN22
STAG1
EHHADH
ANKFY1
METTL24
ELMO1
RAB40A
VDAC1
BOD1L2
OTUB2
NTMT1
AGPS
NUF2
CTF1
BCL7C
SMIM8
GJB7
ERGIC1
CCNG1
KRAS
ABLIM1
ZBTB8OS
RBBP4
C8B
PALB2
DCTN5
TNC
ZNF610
SFRP1
LIFR
FARP1
PHC2
CELF1
INPP4B
ZBTB25
ZBTB1
TMCC3
UACA
HROB
CES3
DTNB
WIPI1
SOAT1
FLNB
TALDO1
CASP7
PTGR1
ACOXL
SOWAHC
SEPTIN10
HACD2
GPM6B
CEBPB
COMMD2
CLDN24
CLDN22
MRGPRX1
LOXL4
TRIM2
TOMM34
FAM91A1
GNG10
GBP4
TSN
NIFK
MAGI3
LRIG3
TNRC6C
TIAM1
TSPAN13
ATF3
GAS2L1
NBPF15
MAB21L4
CROCC2
CRYGB
KCNJ1
IVNS1ABP
ADM
ESR1
SYNPO2L
MYOZ1
PLLP
ZNHIT3
FGFR2
ZSWIM3
ACOT8
KCTD1
MACC1
DST
TMEM14A
BCAR3
HYI
FDXACB1
C11orf1
ALG9
CCNI
PKP4
CCDC148
NEDD9
SNTB1
FZD8
DICER1
ZNF148
TPM1
SCOC
CYP19A1
PARP11
RTRAF
METTL11B
ENPEP
SELENOT
UROD
HECTD3
PAQR5
ODF4
RTL10
GNB1L
PRKX
PLCG2
PRR14
FBRS
CLTA
C5orf63
GPR161
MUC20
LYPD6B
MYO16
CCDC182
XPA
CFC1B
TFRC
ADAMTS8
PELI1
SUCLG1
CNDP2
RBM8A
BCL9L
ENTPD4
EPHB3
MCCC1
GSTA1
LOC107986453
FAM237B
PGPEP1
HNRNPA2B1
CBX3
NDUFB7
LPIN3
PRDM1
ZNF396
SPACA6
DAAM1
SEC22A
DDX58
PRAG1
MSX2
NDST4
RNF130
MATN3
ZBTB8A
COG1
RRP15
JAM2
TMEM233
FAM83F
CPT2
TMEM244
RDH13
EPS8L1
RNF224
DDX47
RNF208
CYSRT1
KALRN
ZSWIM6
KLHL4
TRIB1
PDK1
NEDD4L
SPAAR
HRCT1
PKIB
LHX1
CHIA
USB1
CDH8
ZNF76
TIPARP
ZNF438
EYA2
SGK3
CLDN18
RAD54L2
CUL4A
MYBPH
CHI3L1
CYP2A6
SLITRK2
PTCD1
CPSF4
ZNF740
CSAD
PLAUR
CRTAM
WDR6
PTPRD
DCLK3
SLC25A51
BMP7
GRM3
RASGRP3
BAMBI
RASSF10
CLVS2
SKIL
PRKAB2
CHD1L
ARID3B
ASIC3
PROC
PDXK
FRG2C
NPAS4
ERCC1
SIRT1
AVEN
MTIF2
MLLT11
CDC42SE1
TMEM95
KCTD11
BHLHE40
XKR7
JUNB
SYNPO
OLFM2
HOOK2
LOC102724770
DGCR6
CRTC1
SERPINE1
STAM2
RBPJ
SEPTIN9
JMJD1C
PPP6R1
RNF103
BCKDK
ANXA8L1
BMF
PPP1R13L
POLR1G
ITGAE
IQSEC3
LPCAT3
ART1
MIPOL1
BIRC7
FRG2
HTR5A
TBC1D22A
NKX1-1
GIP
RNF213
GNB2
FZD5
H3C4
HPS4
ATAD2
LRP12
FSTL3
NOS3
GSDMD
KLF10
F2
KDM6B
FAM24A
LIMS1
TRIB3
ACTR3C
PDZK1IP1
HOXA3
CCDC88A
EXOC2
ZBTB45
EP400
UAP1
SREBF1
H4C4
H2BC6
NDUFAB1
HOXA4
ZNF341
LRRC37A3
RIPOR3
ZNF595
PDGFB
LIN28A
MARCHF3
FCGR1A
INSM2
ANXA8
GLT8D1
TMEM9
CALM2
GLIPR1L1
CAPS2
PDLIM7
ZBTB38
UBE2F
CXXC5
LMNA
RCL1
RCOR3
MRPL2
KLC4
CUL7
FAM25G
FAM25C
CLDN14
SCN1B
HPN
OPLAH
H2BU1
H2AW
TUBB
CDK5RAP2
CLTC
NHLRC1
SLC7A6
RNF144A
VDAC2
SLC45A4
USP42
CEMIP2
BCAR1
TAF9
RAD17
AK6
PLEC
POLR2J3
RHOQ
ATP6V1E2
P2RX6
TBC1D1
DRAP1
C11orf68
CPLX2
APOC2
ZC3H18
TGIF1
PBRM1
IER3
GNL3
FLOT1
CCDC200
COL7A1
BCAP31
ABCD1
TRIM65
MRPL38
BRWD1
TMEM222
MMP20
GP1BB
SLC6A9
RARA
AIFM2
BRPF1
DUSP1
SPATA9
RHOBTB3
ACVR1
ANGPTL4
CAT
LRP6
JRK
SPIN1
PURA
MDM2
MSH6
GLI1
LRRC61
SLC44A1
PLEKHA7
FBXL13
ARMC10
RBFOX2
TMEM242
ZC3H3
SLC27A5
PLOD2
C9orf50
FCRLA
PC
KCNN4
ADAM17
PGLYRP4
RAB26
TRIM44
LURAP1L
H2AZ2
TEX46
RGS3
KDM1A
SKI
OSGIN1
PLEKHF2
OTUD7B
TRAF7
NAGLU
HMOX1
RWDD1
E2F3
VKORC1
LEMD3
MFSD10
THOP1
SGTA
SEMA7A
MAMDC2
CLDN9
WSB2
RELA
GZF1
CCR6
GPC6
SERPINB6
FGFR3
NOTCH2NLA
NBEAL2
CCDC12
MRPL20
CCNL2
STK11
ARL6IP1
ST6GALNAC6
HERPUD2
FURIN
ITPK1
TNFRSF12A
THOC6
HCFC1R1
FCGR3A
CLDN6
PHETA1
PIK3IP1
EAPP
GPR182
KANSL3
CELSR3
CTNNB1
FPR3
SF3A3
HNRNPR
SH2D6
CAPG
MAN1A2
CANT1
RAP1A
USPL1
HMGB1
ZFAND2A
LARS2
KANK1
SNX14
SH3YL1
ACP1
ERBB3
SLC25A17
FHL3
ZC3H6
KIAA0232
NDE1
MARF1
AMD1
PIM1
NFKBIA
CSPP1
COPS5
ARFGEF2
CCPG1
C15orf65
FAM174C
USP48
APOC4
PIK3R1
GRAMD2B
SRSF6
PSPN
ALKBH7
STMN3
RTEL1
TNFAIP2
HPCAL1
PRKAG2
SPRED2
NOTCH2NLC
TTYH3
MOB4