ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100386 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◣ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD1
RGPD2
DYNLL1
MTRNR2L9
LEKR1
EMILIN2
EAPP
H4C15
H4C14
H3C15
H3C14
H4C12
H4C11
H2BC15
H2AC15
CCDC200
NGB
H2AC19
H2AC18
SCRIB
MTRNR2L1
WASHC2A
MTRNR2L6
ZC3H10
RPL41
ESYT1
H2BC14
H2AC14
H2BC4
H2AC6
LOC112694756
C1orf198
LAMP1
H4C3
H1-6
WASHC2C
DUX4
TAF12
PAFAH2
PARP16
SIRT4
POLR2J3
POLDIP3
WDR74
STX5
FRA10AC1
SKIDA1
HSPE1-MOB4
HSPE1
HSPD1
TMEM107
PCNA
CDS2
TMEM230
STAT1
H3C4
H4C4
H2BC6
CALM1
KIF2C
TRMT2A
RANBP1
GABARAP
PHF23
DVL2
DNAJB4
CCDC144A
NCBP3
GBA
AMDHD2
B4GALNT3
ATP6V0C
MTF2
IPO4
TM9SF1
MAMDC2
H4C8
INTS12
GSTCD
KDM3B
CASQ1
MDN1
CASP8AP2
ATR
PSMB8
TAP2
SLC20A1
IRF9
UBTF
TEX9
RFX7
DAB1
OMA1
TSR3
GNPTG
H4C9
H2BC12
H2AC12
H2BC11
H2AC11
NUP54
NUF2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
LRRC37A3
YIPF2
TIMM29
TOR1AIP2
TOR1AIP1
RPS7
PIM1
HEXA
GSPT1
ZSCAN30
DPY19L4
PTEN
KLLN
CDKN2AIPNL
DENR
DRAP1
C11orf68
GORASP2
VPS13D
MTERF1
ARMC7
AFF3
POR
GTF3C3
C2orf66
ACSL3
MDM2
TVP23B
VPS33A
RBIS
RHOT2
RHBDL1
KRTAP21-2
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
RAE1
MTRNR2L3
BNIP1
ZCCHC4
NPAS4
HS1BP3
SCGB1C1
ODF3
RNF223
NOXO1
TBL3
RPS2
RNF151
TMCC2
MRPS23
TDRD7
VOPP1
IQCN
JUND
NOLC1
LRFN3
ZMPSTE24
STX16
COMMD2
NCF4
CD68
MPDU1
LOC100996842
EIF4A1
GNAI2
RRM1
CACTIN
PRND
ADNP
BBC3
PRR5L
COMMD9
TCTN3
CSPP1
COPS5
ASB2
GRAMD1C
N4BP3
MED23
ENPP3
DHX33
AURKAIP1
NME1-NME2
NME1
HASPIN
SLC35B1
UBXN6
EXD1
CHP1
CCNC
PLEKHM3
POLR3B
DDX1
MAP1LC3B2
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
RABL2B
RAP1GAP
PTPN6
C12orf57
MARCHF8
CLCN7
BCL3
SSBP1
COMMD4
ERVH48-1
BHLHE23
STX18
PSMD3
CTNNB1
SLC38A7
NDUFS7
MRPL44
SLC39A13
AKAP11
FOXJ3
DPP8
SHMT2
NDUFA4L2
ACTR10
STAT3
SF3A3
STAM2
ATP5MC2
POLR2J
ACTRT3
MYNN
RABL2A
HMGN2
TMEM147
CSNK1D
SLC2A4RG
LIME1
EIF3F
APBB2
ZNF507
LRRC59
GTF2H2C_2
GTF2H2
ZNF25
TSN
RPL10A
PTMA
MLEC
LSM11
TTYH2
RPL38
HPS6
ARMH3
ABCA3
SMARCD2
PDE11A
SLC25A51
DCP1A
RBM45
POLG
ALG10B
NCAPG
BAIAP2
ABHD17A
CDC37
TMEM242
CDK5RAP1
GTF2H2C
H4-16
H2AJ
ATP6V0D1
AGRP
SCGB1C2
DGKZ
BHLHA15
UBALD2
CDC42BPG
INTS1
CYP1B1
RPL21
TSSK4
OR2L13
OR2AJ1
RDH5
ITGA7
BLOC1S1
DSTYK
RBM28
TRIM69
RIF1
AP1M2
ID1
RMDN2
DENND4A
COL4A2-AS2
RBBP5
TATDN3
NSL1
DCK
H2BC17
H2AC17
NCAPH2
LMF2
STK17A
ANKRD36B
H3C12
PHRF1
ZFP36
INTS5
GANAB
PAF1
MRPL24
TAF3
HDGF
SMPD4
MZT2B
NOXA1
SH2B3
ZNF358
MCOLN1
DCP1B
RWDD1
WASHC5
NSMCE2
SLC12A6
NUTM1
NOP10
MRPS31
JRK
PDE6D
COPS7B
POLD3
SCAND1
PHB2
NAGPA
VPS50
HEPACAM2
TMEM127
CIAO1
TTC8
NUP205
GLIPR1L2
TLR5
CERS2
DHX8
ANXA9
NSUN4
RPS20
TMEM115
NPRL2
CYB561D2
TSNAX
MAPK8IP3
BCL2
RHOF
SETD1B
ZBTB45
SLC27A5
USP3
SPATA25
NEURL2
CTSA
ZSWIM1
FAM227B
DTWD1
TMED9
B4GALT7
CAB39
RAF1
ZNF341
TRIP6
PRRG2
NOSIP
SRRT
IQCG
RPL35A
SNX18
ADAT2
PEX3
XKR7
GALK2
COPS2
LPCAT3
ARSG
GRM4
ADGRG1
TBC1D19
SH3GL1
GABPA
ATP5PF
DCLRE1B
AP4B1
SHISA5
TREX1
FRG1
CHAF1A
H3C6
H2BC8
H2AC8
IER3
FLOT1
SMIM41
TRAPPC3
MAP7D1
ATG101
TOR2A
UGT8
DCAF10
AHCY
AMZ1
SRRM3
SLC39A3
R3HCC1
COL9A2
HGFAC
INO80C
PLEK
ARL14EP
PXK
SLBP
TMEM129
TACC3
RABGGTA
TGM1
DIAPH1
MRPL1
LZTFL1
PSMF1
ZWILCH
SNAPC5
RPL4
PRKDC
MCM4
TUBA4B
TUBA4A
STK16
GLB1L
PLCD3
ACBD4
NRTN
ATF3
PCID2
CUL4A
AP5B1
BBS1
SUGCT
MPLKIP
MED27
OVOL1
TAS2R40
DUSP4
VTA1
NMBR
H3-3B
UNK
FFAR3
FFAR1
ANKRD46
COX16
HSPA6
PPARD
KIF21A
RBM17
GPSM1
CARD9
PPIP5K2
GIN1
TIA1
PCYOX1
KRR1
PRDX1
UBQLN4
LAMTOR2
MAPRE3
LARP1
MOB4
EIF2D
SKP2
LMBRD2
FBXO5
BPTF
POLR2J2
RPL27
IFI35
ARID2
STOML1
NBN
RAD23A
CALR
C8orf37
RFC4
TTLL4
PPIF
PML
TIPIN
NUDT17
FBXW5
C8G
KMT2E
TOX4
RAB2B
CRLF3
ATAD5
RTTN
LCN12
TRAF4
TCHP
PIH1D1
ALDH16A1
SLC17A7
NMUR1
RBSN
ATG16L1
SLC33A1
SELENOH
PNKD
RPS15
AAMP
GPBAR1
IPO13
APC2
BHLHE22
MYEOV
LSP1
CHD1L
VPS29
RAD9B
NPR1
ILF2
NFAT5
PDE4A
IL21R
LRRN3
PPP6R1
DPP9
NR1H3
ACP2
FAM207A
CDC73
ZBTB4
SLC35G6
POLR2A
TOMM22
HCN2
PSMC3IP
TOP3B
PRKCE
SEC13
TPD52
CREM
SLC2A4
PFDN6
FCMR
RGL2
LOC102724770
DGCR6
ACTR3
ADAR
MRPL23
RETSAT
MCM3
MMACHC
CCDC163
TESK2
RNPS1
CCNL1
CLMN
SMG6
RUVBL1
EEFSEC
PSMC3
FAM111A
FAM228B
TP53I3
SF3B6
RTP3
LTF
CHAD
SLC35E2B
RSAD1
SART1
WBP1
INO80B
SPNS1
ZBTB40
PPP1R15A
PLEKHA4
TMA16
INKA2
SAAL1
DDX20
ARHGAP42
FASTKD1
TUBB
MDC1
ZER1
NOTCH2NLA
SNRPB
ART1
NDUFS3
KBTBD4
PNPT1
FAM180B
RWDD3
SLC1A4
MRPL58
RNASEH2C
KAT5
NOM1
TRIM32
ASTN2
UBC
USPL1
HMGB1
CEP120
SLC24A1
INTS14
E2F3
AARS2
PRRT2
GOSR1
MAZ
ZDHHC4
KANSL3
FER1L5
U2AF2
CCDC106
CTSW
ERCC5
USE1
TNFRSF21
MEF2A
CCDC85B
CCDC65
BROX
AIDA
TUBA1B
FIBP
KMT2C
DEF6
PCBP2
FTH1
MTA2
SNRPD3
GUCD1
UGGT1
DNAH1
LUC7L2
BEST1
TUT1
APOBEC3B
SGCA
PSMG3
ZFYVE26
RAD51B
KLK1
CIPC
SCFD1
TMEM91
B9D2
ZNF518A
ZNF639
C8orf76
TGFB1
PLSCR2
CDKN1A
HINT3
RMND1
ARMT1
POLR3E
TRIP4
PCLAF
USP30
ATF4
PRDM1
UTP3
EIF1B
NFKB2
SPATC1L
ZNF219
TMEM253
POLR2C
SNX3
NUP153
COMMD1
GNB2
CCT4
ZNF148
U2SURP
CCNT1
NDUFS6
MRPL36
HEATR5A
FCHSD2
BRMS1
ROM1
EML3
TNFAIP3
RIN1
PTK6
SRMS
SCAF11
SRSF7
METTL7A
NCBP2AS2
NCBP2
B3GAT3
PES1
CCR1
SRF
TAOK3
SUDS3
ZNF3
COPS6
CUL9
THAP11
UCKL1
GADD45B
C18orf25
NEUROG2
ENOSF1
KAT6A
TMEM167B
SSNA1
ANAPC2
ATAD2B
S100A13
CHTOP
MAD1L1
S100A1
NUDT1
MRM2
MOGS
CARM1
MRPL53
KLHL20
TIPARP
NANOS3
NAA80
HYAL3
VPS45
IFRD2
PAK1IP1
C6orf52
DERL3
CNOT6
CYBA
BAK1
NPAT
ATM
PRMT5
EEF1A1
NAPA
SLC43A3
TSSC4
SNRPE
MFSD4B
NSFL1C
SMIM29
MAP3K9
FLOT2
DHRS13
RAB8A
FAM187A
EFTUD2
CCDC103
NXF1
MAF1
CYC1
PHF13
WDR97
CCDC43
C19orf48
TMPO
CCND3
CRK
TAF8
RPS6KB2
PTPRCAP
NAPG
TNIP2
TTC39C
GCHFR
PLS1
SACM1L
KLHL12
CLCNKB
EDC4
HTR5A
FMC1-LUC7L2
FMC1
RMDN3
GPR68
PAXBP1
MARCHF7
RARA
SYS1
MRPS14
H2BC5
H1-4
PRMT3
GRB2
TP53TG5
NEU4
SERTAD1
USP48
MAT2A
VARS1
PRX
ZNF784
CACNB3
TMEM101
TOM1
MAPK1IP1L
GCNT1
SDCBP2
TMEM138
CYB561A3
C5orf24
TMEM41A
RPL29
UBE3D
DOP1A
MGAT5
MCM6
NT5C1A
LMNA
TMEM79
SMG5
PTPN3
CCAR2
C8orf58
MPEG1
TXNIP
ORAI2
PSMD11
TOR1A
FARSB
FRG2
PSMA1
CNPY3
GFI1B
TSC1
ARHGAP22
TRIM65
MRPL38
RAD52
PBLD
HNRNPH3
GAS2L1
ING1
CARS2
NUDT8
ALG10
NOL11
MTMR6
THOC1
RXFP4
MBLAC1
FBXO34
TAF6
CNPY4
TEKT2
ADPRS
TCTEX1D2
SH3BP2
MAPKAPK2
ATN1
BUB1B
AP2M1
SNAI3
TM4SF4
TCF7
ERMP1
CD2BP2
ANGPTL4
WSB2
SREBF1
DHRS3
CPT1A
BHLHE40
SQSTM1
RGS3
ARID3B
VSIR
CYP26A1
ZNF367
SPHK2
NUDT15
RXRA
SLC25A20
LTBP3
LEO1
REXO4
ADAMTS13
ETFB
DBP
SOCS2
FASN
DLG4
ACADVL
MYLIP
SLC45A4
RALGDS
SERPINE1
SOAT2
IGFBP6
BCAR1
WDFY2
BCKDK
TMCO6
CD14
NRL
RARB
COL21A1
UQCRHL
DOT1L
ABLIM3
ZMYND8
NDUFA2
IK
FBXO46
SLC6A12
ABCC10
ZDHHC19
SLC51A
ARNT
SLC35F6
TBP
PSMB1
PDE12
TAGLN2
C3
ACACA
ATP1B1
TGM2
CALML3
TNPO3
NEDD4L
USP32
AJUBA
ABCA1
NBEAL2
CCDC12
ITGB5
PEMT
ZGPAT
ARFRP1
PRKAG2
MAP1LC3A
CSF3R
SYNPO
RARRES1
DCAF11
TRPM1
LOC102724265
KLF9
LYST
ECH1
APOC1
TNFRSF1B
CCDC174
ZNF775
IL1R1
ITPK1
FETUB
SEPTIN9
ZFAND2A
CDK3
SERINC2
TINAGL1
TUFT1
DENND4B
TRIM25
MIDEAS
ARFGEF2
LRRC8A
KYAT1
DONSON
SLC51B
TCP10L
PCK2
ITGB2
GFOD2
ZMIZ2
SH3BP4