ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX194580 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◣ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

ARID3B
SOCS2
TFF1
POR
BMP7
DUX4
USP32
CNOT3
BCAS4
MAMDC2
NQO1
AKAP1
CELSR2
TRIM37
TMIGD3
ADORA3
RTEL1
BHLHE40
LFNG
TEX14
RAD51C
AMOTL2
CSAD
RARA
CLTC
PSMD6
SH2B1
ARFGEF2
STMN3
PTPRN2
MAPKAPK3
CISH
LGI1
KIF5C
NOTCH2NLC
GPR37L1
ZBTB7B
LENEP
MIDEAS
ZCCHC4
ELF3
CCDC200
NOTCH2
MUC3A
OTUD7B
TP53INP1
ART1
OVOL2
HSPE1-MOB4
HSPE1
HSPD1
FKBP4
ARHGEF1
CD79A
CIB3
CERS2
STX16
ADARB1
CDH1
APOBEC3B
SPAAR
HRCT1
EMILIN2
SPIRE2
RMND5B
SREBF1
CRYAA2
CRYAA
CAPN11
GREB1
DBNL
EPS8
IGFBP4
NOTCH2NLA
EDN1
PLOD2
RNFT1
TANC2
NPIPA1
NCOA3
CXXC5
ZGPAT
ARFRP1
TSC22D3
TMEM184A
MTRNR2L1
COL6A2
FASN
MICALL2
DCLRE1B
AP4B1
FUT1
FGF21
POLG2
DDX5
IZUMO1
ITPK1
MRPS31
PARD6B
SBNO2
PRLH
BRIP1
PRSS27
FRG2
ESRP1
NOTCH2NLB
KMT2A
CTBP1
GBA
FCMR
PRR25
GNG13
RPUSD1
CHTF18
LPCAT3
SMARCD2
TRIB1
EVL
PDRG1
POU5F1
GLIPR1L1
CAPS2
GSE1
TOB2
ZNF296
GEMIN7
TPRA1
MCM2
LATS1
ADCK5
NRAS
DRD4
COMTD1
ABCA1
RHOF
SETD1B
RGPD1
RGPD2
NOTCH1
TXNDC11
ZNF217
DNPEP
GRHL2
ZC2HC1C
ACYP1
NPEPL1
ZMYND8
CIPC
CALML5
FURIN
PTEN
KLLN
CYP26A1
SULF2
BDH1
RFESD
RHOU
FREM2
PASD1
STC2
C19orf33
RNF223
HS3ST6
HPCAL1
CA4
MYOG
ZNF740
PDE4DIP
BDKRB1
SLC1A5
SPHK2
DBP
SNX24
NBPF6
LGR6
CPT1A
WRAP73
RBM15
SH2B3
NGB
HOXB1
SCGB1C2
PLEKHF2
KCTD3
IQANK1
FAM83H
APPBP2
C16orf86
DENND2D
PARD6A
ACD
STX6
NDST2
LOC102724770
DGCR6
RGS9
HELZ2
FNDC11
COLEC12
TBX4
HNRNPA0
UPK3B
C9orf24
MYORG
GTSF1L
CTNNB1
NTAQ1
RXRA
FAM227B
DTWD1
PA2G4
BCL3
SLC2A10
KEAP1
BRD3OS
CDH18
BCAS1
NBPF4
KMT5B
SCGB1C1
ODF3
TFAP2C
TTC6
FOXA1
RGS19
OPRL1
LKAAEAR1
SNX17
EIF2B4
ZNF513
SRMS
LINGO1
METTL26
WDR90
AJUBA
CLCN5
PFDN4
NACA2
RARG
MYADM
UBL4A
LAGE3
MTRNR2L8
USPL1
HMGB1
EMC2
PERCC1
ARPP19
RNF139
DNAJC5
MTRNR2L2
MSH3
DHFR
P2RX2
ALDOA
SPATA3
MAN2B2
GPRC5A
HNRNPD
ZNRF3
DOK7
NFKBIA
KRI1
CDKN2D
ZNF76
MMP8
SDHA
CCDC127
RAB43
GTPBP6
KMT2E
ATAD2
IQUB
CASP7
SMIM22
ROGDI
IST1
ZBTB37
TATDN1
NDUFB9
SLC22A31
ESRRG
AMZ2
RPL22
RNF207
SRI
SIVA1
CSF3R
TRPM2
MUC20
COMMD2
AVPI1
RASEF
ID1
RPEL1
IER3
FLOT1
KLF9
PLEC
ST3GAL4
LRATD2
VAMP4
GRM8
IMMP2L
TLE4
RAB7B
RRM2B
PTTG1IP
NANP
PRSS22
HEG1
PARP10
OR1F1
GRINA
LRP6
SDC4
HEATR6
TMEM114
SLC11A2
FAM174B
UCKL1
ARRB1
ZHX2
GADD45G
TMEM41A
ZHX1-C8orf76
ZHX1
C8orf88
TMEM250
ABCA5
CDK8
TESMIN
ARHGAP39
ARL6IP1
PRSS8
PRSS36
HES1
SERPINA12
PDE6B
NTN5
FRMD4A
CAST
CYP24A1
NUCKS1
CERK
ANGPTL4
WSB2
DHRS3
SQSTM1
RGS3
VSIR
ZNF367
NUDT15
SLC25A20
LTBP3
LEO1
REXO4
ADAMTS13
ETFB
DLG4
ACADVL
MYLIP
SLC45A4
RALGDS
SERPINE1
SOAT2
IGFBP6
BCAR1
WDFY2
CSNK1D
BCKDK
TMCO6
CD14
NRL
RARB
COL21A1
UQCRHL
DOT1L
ABLIM3
SPATA25
NEURL2
CTSA
NDUFA2
IK
FBXO46
ZSWIM1
SLC6A12
ABCC10
ZDHHC19
SLC51A
ARNT
NDUFS7
SLC35F6
TBP
PSMB1
PDE12
TAGLN2
C3
ACACA
ATP1B1
TGM2
SLC20A1
CALML3
TNPO3
NEDD4L
NBEAL2
CCDC12
ITGB5
EAPP
PEMT
ACSL3
PRKAG2
MAP1LC3A
SYNPO
RARRES1
DCAF11
TRPM1
LOC102724265
LYST
ECH1
APOC1
TNFRSF1B
CCDC174
ZNF775
IL1R1
FETUB
SEPTIN9
ZFAND2A
CDK3
SERINC2
TINAGL1
TUFT1
DENND4B
TRIM25
LRRC8A
KYAT1
DONSON
SLC51B
TCP10L
PCK2
ITGB2
GFOD2
ZMIZ2
SH3BP4
AIFM2
SERPINF2
ELL
COL5A3
ERCC1
ADRB3
RBFOX2
DUSP1
ASB2
PHC2
KLF16
ABCB11
CLDN9
ADAM17
FASTKD1
PPP1R35
NOL4L
NR1I3
LPP
RANGAP1
COL18A1
PYGL
APOA4
AKNA
ANKRD28
LRFN3
GBE1
ETFA
CLDN6
CD244
ETFDH
C4orf46
NDRG2
CRACR2B
NDUFS8
ADSS1
OSGIN1
RBSN
CDK11A
PLCD3
ACBD4
MIDN
FRMPD1
CDK5RAP2
C11orf86
ACSL1
PSPN
ALKBH7
MBL2
SPAG8
HINT2
TNFRSF12A
PLXNB2
CDC42BPG
APOC4
APOC2
CCL16
CRY1
CRTC1
TRIM55
MLLT3
LCMT1
LAG3
LMNA
APOE
CNDP1
FAM228B
NR0B2
VWA1
SLC50A1
EFNA1
GPX4
HS6ST1
FOXO3
VGLL4
LRRC20
TP53I3
SF3B6
POLR2E
TRIOBP
NUDC
MPV17L
ANXA6
PPP6R1
MRPS10
COMT
CDCA7L
TRIB3
TLCD4
SDCBP2
UGT1A1
PLEKHA7
FOXA3
IBTK
CYP3A7-CYP3A51P
CYP3A7
TSKS
AP2A1
HNRNPUL1
MRPL20
CCNL2
SRCAP
LOC730183
FAM174C
CFB
KANK1
ATP2B2
CYP4A22
SLC25A18
EIF4G3
FST
ARL8A
TMEM88B
ZPR1
APOA5
REXO1
AGT
WDR86
PTMS
MLXIPL
SLC19A3
NPPA
PEX11A
PLIN1
TMEM171
MT2A
CSRP1
B9D1
SCARB1
COQ10A
ANKRD52
BAIAP2
MAMSTR
PTPN4
TSPAN4
POLR2L
MGST3
HMCN2
UROS
BCCIP
HERPUD1
PPP6R3
NEK4
ITIH1
LGALS1
OXT
PNPLA2
SEC14L4
IDNK
PCGF1
LBX2
TP53INP2
SOCS3
WDR93
AKT2
NINJ2
TGFBRAP1
C2orf49
TPPP2
CPNE7
TTPAL
NPAS2
SIRT5
SDC1
SRP14
CCL20
CCDC38
AMDHD1
THNSL2
PCNA
PPP1R32
NPIPB13
RRN3
IQGAP2
ACTN4
PPME1
C2CD3
PIKFYVE
SH3YL1
ACP1
TCIRG1
NUBP1
DNAJB3
SMAD3
MBD4
IFT122
IRF9
H4C2
H3C2
H2AC4
MAPRE3
ADGRG3
RRM2
CEBPB
DMRTA1
C1orf226
SPEGNB
GMPPA
KANSL3
FER1L5
PPP1R15B
LDLRAD1
AVP
OXA1L
IRF2BPL
RNF111
ANXA2
HERC5
IL6ST
FRG2C
TNS1
PIEZO1
SGK2
SH3D19
PIGS
ALDOC
SCNN1A
LTBR
CASKIN2
TIGD2
LAMB3
PC
CDKN1A
IRF2BP2
SLC25A47
GPC6
S100A9
PGLYRP4
SMPDL3A
SLC17A4
CP
RB1CC1
KLF10
CLDN23
TOX2
PECAM1
DPP9
POLD2
RBKS
BABAM2
PPIL2
TACO1
ABCB4
ZNF497
A1BG
NBPF1
KMT5A
UBR4
SH3BP2
UCP3
FGF19
ZC3H7B
RIN3
GDF15
PIK3R3
CAT
PRTN3
ELANE
CFD
ADNP
EFCAB12
CA5A
SECTM1
ASAP3
ABCC3
TANK
NIBAN2
H4C1
H3C1
H1-1
SEC14L2
ZNF148
PRR18
IL11RA
GALT
FHL2
HIVEP2
ACSL5
ARSB
TNS4
PSMD1
LDLR
C19orf12
SHB
NOL12
NFIC
PACSIN3
RBMS1
RASD2
BCL2L1
KRT8
SYS1
STAT6
ACAA2
SNAPC1
LOC644090
SCAF1
RRAS
AOPEP
ASPG
NFE2
LRP5L
ABCB9
EDEM1
HSD17B4
HNF4A
MYL7
SERPINC1
NAA38
CTSZ
FN3K
SIGMAR1
NECTIN4
KDM2A
PPP2CB
TMEM138
CYB561A3
ZNF184
OGFOD2
ARL6IP4
C22orf31
AKR1A1
DAGLB
GRB14
NCOA4
VASN
TTC39C
SPG7
CDV3
EPB41L1
DEAF1
RAPGEF1
MST1L
TXNDC5
CYP4F11
TOR3A
USP2
CST3
H4C12
H4C11
TMEM182
MFSD9
TBCEL-TECTA
TBCEL
H4C15
H4C14
PHRF1
EPS8L2
EGLN2
STX10
IER2
THRSP
LIMS1
H3C15
H3C14
MKNK2
GFOD1
ITPRIPL2
MOV10L1
GPR108
PPP1R12B
LIPE
CYP4A11
UBE2T
LIPC
TGFBR2
SCAP
H2BC15
H2AC15
SLC38A3
PPP1R18
AGPAT3
SIRT1
SPRED2
ABCC6
CHCHD10
CLK3
CHD3
NR1H3
ACP2
F2
SPRYD4
CHN2
UBE2H
MLLT11
CDC42SE1
TFIP11
TECPR1
TSPAN1
P3R3URF-PIK3R3
P3R3URF
MARVELD1
SLC2A4RG
LIME1
NKG7
CLDND2
ABCG1
ARHGAP22
RNF103-CHMP3
RMND5A
TMCC3
EPHX1
APEH
GABPB2
EIF1
RBAK-RBAKDN
RBAK
RAC1
POLDIP3
RNF10
IQSEC1
COQ5
CMIP
TTC30A
TRIP10
GALR3
ACSL4
STX18
MROH7
PEPD
JAK1
ZC3H10
RPL41
ESYT1
ZNF564
NFE2L2
ACOX2
FLYWCH2
CCNL1
TLCD4-RWDD3
ABCG8
ABCG5
EFNA2
TMEM80
SLC25A35
CDS2
DHX8
GPATCH8
FGGY
RRP1
PTPRF
CECR2
GINS2
GCAT
ZNF563
PHLDB2
HADHB
HADHA
POLR3H
BCAR3
TTI2
PDSS2
CPNE6
ICAM1
MYEOV
OMP
TRAF7
SREBF2
ASB13
PIGV
ALPL
ERGIC1
ATXN1
ZKSCAN1
TMEM82
SEC24D
RPL37
CARD6
GPR137
BMERB1
INTS9
HMBOX1
CPVL
GSDMD
RANGRF
G6PC
CSTB
CYB5R4
RTP3
RAB26
KNG1
RASAL3
TF
MGAT4B
FOXP4
DTX4
ROCK2
SCD
VPS26C
LOC102723996
ICOSLG
TPCN1
ROBO3
TNIP1
TNFRSF1A
PYROXD2
SLC25A15
UGT1A6
MLYCD
CDC14B
PLGLB2
PLGLB1
SPATA46
TMIE
ZBTB20
OXSM
NGLY1
INHBE
GLI1
APOC3
PROSER3
PPARA
CCL14
NOS1AP
MRPL33
SDSL
MAT1A
ZBTB7C
TMBIM6
IDH1
TCTEX1D4
PLK3
BTBD19
THOP1
SGTA
SLC16A5
AMBP
TTC36
H2AC19
H2AC18
TARS1
GCLC
RAC3
LEKR1
DCXR
COG2
TLN1
CREB3
ARHGAP24
ALS2CL
PRPH2
CRYL1
TCEA2
HSPB6
AGPAT2
UBC
PHKA1
DUSP6
KPNA2
MFSD1
NDST1
IFNGR1
TRIL
MB
MFSD10
MRPS11