ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10104975 | 5637
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◣ SRX10104975: 5637

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

C2orf42
PPP2R1A
AKT1S1
TBC1D17
PNKP
DICER1
PPP5D1
CALM3
TPST1
CPT1A
BRWD1
PTPRA
HNRNPUL1
TYK2
ACACA
CCDC77
UBE2I
ANGPTL4
ZGPAT
ARFRP1
DNAAF4
ERCC1
SQSTM1
USP32
HOXA3
HOXA4
HOXA5
SOAT2
IGFBP6
TNFRSF1B
MAP3K9
DHRS3
ZBTB7B
LENEP
SDCBP2
SPHK2
DBP
ELF3
LPCAT3
KLF6
UPK3B
DTX4
RXRA
SREBF1
ASB2
PLCD3
ACBD4
WDR86
RPL22
RNF207
MRPS10
PPCDC
SLC25A20
CDCA7L
DOT1L
KRT31
BBX
WNK4
VPS25
PTPRE
GPC1
TMEM40
GPA33
ID1
TJP2
ZNF367
ABCA1
FASN
VGLL4
PRDM10
CLIC5
ENPP4
TMEM256
PLSCR3
NLGN2
TOP2A
TINAGL1
GPRC5A
CARD14
LCN2
NREP
TECPR1
TRIL
GRAMD1C
ITGA3
KRT7
RIN3
TMEM139
CASP2
KLF9
ECH1
KLF10
RIPOR3
CXorf38
HIVEP2
BATF2
ACAA2
ZMYND12
PPCS
CCDC30
VSIR
RARB
EPB41L1
EVL
TIMM13
ATP1B1
TMEM218
TUFT1
NDUFS7
ETFA
TNPO3
TACSTD2
DLG4
ACADVL
GPATCH8
GRAMD2B
CUEDC1
SUSD1
SCAF1
RRAS
PMEPA1
FBXO32
CDK3
BRWD3
KANSL3
FER1L5
LEKR1
SKA2
PRR11
IRF6
LAPTM5
TBP
PSMB1
MEAK7
MLLT3
DNAH6
SYK
LEO1
ACSL3
RMI1
HNRNPK
BCL3
RAPGEF3
CAVIN4
HEG1
SCOC
NTRK2
ARL14EPL
C19orf33
ETFB
NKG7
CLDND2
BCKDK
LIMS1
NOL4L
CAT
URB1
JUNB
HOOK2
KRT75
KRT6B
GPR137
IGF2BP3
TOX2
AFAP1
LOC389199
PROSER3
HSPB6
LIN37
INSYN2B
GRB7
RNPEPL1
DUSP28
ANKMY1
FOXJ1
PHLDB2
SERP2
ZMYND8
PDE12
PECAM1
PPP1R12B
UBE2T
UQCRHL
STPG1
NIPAL3
BAIAP2
TRIM55
E2F3
FDXR
SLC37A2
TRIM29
ACSL5
GGCT
TRIM25
WSB2
ABCC10
SKIL
LTBP3
PLAAT4
SOX9
STRA6
DRAP1
C11orf68
TMEM184A
WAPL
NUDT15
PTTG1IP
DUSP6
MICALCL
MKRN2OS
MKRN2
LAMA3
SH2B3
KIAA1217
FUT2
C1QTNF1
ARHGAP27
TRIOBP
PRELID3A
CDK11A
ASB1
SPINT3
TFPI2
COL16A1
CHD9
TRIM56
INAVA
ITPK1
PPP1R9B
STT3B
LAMA5
FOXJ3
PRCD
CYGB
RB1CC1
FLYWCH2
HRK
SMARCD2
EIF1
HCAR3
YIPF4
HCAR2
SMIM29
HMGA1
IL37
NECTIN4
KRT39
SLC38A10
GIP
WDFY2
FHL2
CAPN1
TPRA1
MCM2
CEP70
CMIP
CDC42EP1
PCGF2
FOXK1
TRIM6-TRIM34
TRIM6
VPS26C
CEP41
IGSF10
MT1X
RARA
PHKA1
CFAP300
MUC5AC
TMCC3
STK10
EFCAB9
CLDN11
DLC1
PRKAG2
COMT
BHLHE40
PLEC
PTPN4
REXO4
ADAMTS13
HYAL4
ZNF225
PAQR6
BGLAP
KLK15
KLK1
DAPP1
LAMB3
DONSON
SLC46A1
RNF5
AGPAT1
AGER
PRDM1
PRELID3B
MNT
MYEOV
MFSD10
PAX8
TES
FAM227B
DTWD1
BMF
MYLIP
ETFDH
C4orf46
SLC25A45
FRMD8
REN
MICALL1
TPRN
TMEM203
NDOR1
ANXA1
SSNA1
ANAPC2
CYP26B1
SERPINB12
MBNL1
PHC2
TGM2
VPS72
PIP5K1A
IFRD1
SEC13
ADAP1
OSBPL9
PTGES
CDC42BPG
PPP1R15B
RFC2
LCE5A
CRCT1
ABCB9
OGFOD2
ARL6IP4
BNC1
ZMYM1
TAF9
RAD17
AK6
HBEGF
CDKAL1
FLNA
EMD
TMCO6
CD14
NDUFA2
IK
FGD3
S100A9
PGLYRP4
KIAA0930
DNAJB1
CAPNS1
ESRRA
CATSPERZ
SLC2A5
MUC4
SPAAR
HRCT1
FRMD3
CC2D1B
MICAL2
NIBAN2
RARG
PHYHIP
KRTAP29-1
KRTAP16-1
AJUBA
CAMK2N1
PLIN2
KLHL9
SPRR2F
PCNA
CDS2
CDH18
FBXO46
PLEKHA7
PLEKHN1
NOC2L
KLHL17
BCAR1
CARS1
PRMT9
ADAM17
LHFPL5
PRR15
LIF
DUX4
SERPINB1
KLF16
REXO1
SYT12
ADRA1B
PPL
OXSR1
ADM
TP53INP2
OTUD7B
SEMA4B
PUS10
PEX13
RNF10
COQ5
ZC2HC1C
ACYP1
RHBDD1
IRS1
WDR45B
ABCG1
AGPAT2
AMOTL1
MYRF
TNFAIP8
LYPLA1
MXRA7
AGFG2
UROS
BCCIP
KCNN4
CPA4
KLF12
TJAP1
CLCF1
ABHD6
ANP32C
RRN3
TNFRSF1A
CNOT2
MARVELD1
POLD4
NAA50
ATP6V1A
KLRC3
BPTF
PPP6R3
MUC2
SPIN1
CST5
NBPF4
SLC20A1
RNFT1
DENND4B
AP3S2
SLC35E2B
HIC2
SLC16A5
ALOX5AP
EFHD2
CNIH3
SLC25A18
ERP27
ENTPD5
BBOF1
FABP3
HNRNPH1
KLHL25
OPA3
VCAM1
C11orf86
CAV1
IER3
FLOT1
ANPEP
RNF223
PLEKHG6
GGA1
FAAP24
CEP89
SLC25A35
RANGRF
NANP
ASPSCR1
RPTN
ZC3HAV1
CALD1
PTPRB
MLYCD
MYC
MRPS31
SCAP
ITCH
STX10
IER2
VAV1
SH2D3A
GABPA
ATP5PF
KRT33B
KRT33A
DNMBP
RGS3
CYTH3
B3GNT3
CLIP4
FAM228B
TP53I3
SF3B6
BRCA1
FOSL1
AZIN1
CYP2A13
ATXN2
LDLRAD1
HSDL2
AXL
PLXNB2
ATXN1
CDC14B
ZNF84
KRTAP2-3
KRTAP2-4
CRTC1
RPH3AL
EMC3
FANCD2
LZTS1
GJB5
GJB4
CD274
KRI1
CDKN2D
PLGRKT
ASAP3
STX1A
SRPX2
TSPAN6
SPATA25
NEURL2
CTSA
ZSWIM1
DDX47
PXN
ITGB5
MRPL34
DDA1
ABHD8
CMTM3
CELA3B
TMIE
ALS2CL
LOXL2
KRT8
GABRE
ANXA11
XAF1
TRIM16L
GBE1
TRUB2
COQ4
CTSD
OLFML2A
NR6A1
HOXB4
HOXB3
HOXB5
PEAR1
UBE3C
ATXN2L
GSDMD
COTL1
UBE2R2
KLRC2
AKR1B10
MYBL2
KIAA1522
ZNF827
CKMT1A
CDV3
METTL26
WDR90
ARPC1B
PCCA
SLC25A37
C11orf91
NBPF6
SLC25A1
ESRP1
C1orf116
TENM2
CCP110
NCOA7
THUMPD3
NFIB
UBC
SOX4
TNS4
UBE2H
LOC102724770
DGCR6
MESP2
ASB13
SLC16A3
WWC1
SCNN1A
LTBR
SMAGP
KRT13
KRT19
KRT15
PLIN3
LINC01638
APOBEC3H
DUS1L
ZBTB37
SOWAHB
NPC2
ISCA2
SLC50A1
EFNA1
NRCAM
DPM3
RNF220
PISD
PLA2G2E
ARHGEF3
ACTN1
SPATA12
PSCA
JRK
KRT86
KLHL3
DTNB
HRH1
ANXA2
CSRP1
DBI
C2orf76
ACSF2
ATP1A2
APOBEC3B
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
DNAJC11
ANGPT1
GDPGP1
CIB1
SMAD3
ECI2
DUSP10
S100A2
B4GALNT2
HAO2
RHOF
USP3
MDM2
CLDN4
PRSS22
TEKT1
TMBIM1
BRD2
PADI3
MET
SPRED1
BOLA3
TNFSF15
MILR1
MTF2
KLF11
MLEC
SSH3
DAB2
SIRPD
POU2F3
TAF6L
POLR2G
LY6K
PEMT
MYZAP
GCOM1
IL1RL1
SPEGNB
GMPPA
UPP1
ICAM2
SIRT5
TACO1
SYTL3
DYNLT1
SELENOI
ADGRF3
EEF2
MIEN1
ETS1
IL1R2
PMPCB
ZC3H12A
SLC35F3
SMIM38
RAC3
DCXR
LRRC45
CENPX
PPIP5K1
CKMT1B
MGLL
PTCH1
CELA1
ZNRF2
ST3GAL4
ABLIM3
MB
PEDS1-UBE2V1
PEDS1
TMEM230
LDHD
SSH1
CALML5
BIRC7
HSD17B3
ANXA10
CCL20
ROCK2
HEXIM2
FBXO11
CALHM3
SETD1B
MYADM
CSNK1D
AMOTL2
IL20RB
PNISR
RBM15
SPATA9
RHOBTB3
TLE4
SEPTIN9
HUS1
GNA12
FAP
WDR81
TLCD2
KDM6B
ZNF395
ARHGDIB
DUSP1
PARVA
RHBDF2
BPI
HDAC9
CRYBA1
SH2B1
ADNP
ADA2
VOPP1
MLH3
STX16
ZBTB5
TAGLN2
C16orf95
KAT6B
NEDD4
EXOC1
HES4
GLOD5
VGLL1
PIK3R5
PALM2AKAP2
PDGFA
SERINC2
SYS1
C2CD2
CAPN2
PRR7
ECT2
HR
REEP4
SLC34A3
RNF224
RNF208
CYSRT1
LGALS8
OTUB2
WDR55
DND1
MACC1
TMEM259
CNN2
METTL27
CANT1
NRP1
SPAG4
YIF1B
KCNK6
CYP24A1
LGALS1
NOL12
LRRC8A
KYAT1
RBKS
BABAM2
TCTEX1D4
PLK3
BTBD19
ATP5MC3
PPP3CA
SMARCA5
CLIP2
PPP2R5E
AIG1
BOLA2-SMG1P6
ADGRG7
NBR1
KCNAB2
CHST11
RIPK1
DAB2IP
UNC13D
IGFBP3
RBM7
C11orf71
RSPH3
CDC42
MAB21L4
LASP1
TFF2
MACROH2A1
SUN2
EIF2D
AGPS
TEX43
NT5C
PTK6
SRMS
MKNK2
HSPA8
MGST2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
SPEF2
MYBPC3
SYNJ2
MOB4
HEXIM1
TBCB
POLR2I
OVOL3
ZNF746
SMURF1
NYX
ELOVL6
ARL4A
KAT6A
FKBP1A
ACP6
OXA1L
SERPINB6
PLEKHH3
CNTNAP1
CCR10
SRCAP
LOC730183
RETSAT
POLI
ALDH3B1
RIN2
TMC8
TMC6
TMEM106B
MACROD2
COL1A1
ZNF239
GDA
SRI
FIGNL1
TMCC1
KLK6
SMCO4
PDE8A
PANK4
HES5
SSR3
ARL14
MCL1
RFLNA
FAM110C
TPST2
CTNNA1
FAM71D
ITGB2
TEX46
KDM1A
PKM
ACADS
CCDC88B
ELAPOR2
KRT1
POLDIP3
SHCBP1L
OSBPL3
SPINT1
PPP1R14D
CARD10
ZNF781
NKX3-1
SLC45A4
LPIN2
DSCAM
KNSTRN
OXR1
TAMM41
ZNF785
MTFP1
TUBB3
MC1R
TMEM53
ARMH1
B4GALT1
HERC1
CYB561
C3
ISCA1
CST6
TSC22D3
SYTL1
KIAA1671
GALNT12
SBNO2
GSTP1
AMTN
SQOR
CLDND1
IRAK2
ANXA8L1
KRT74
OR10V1
NUDT16
PXYLP1
MALT1
IL1F10
SLC19A3
RRP1
CSTB
ERMP1
LGR6
VPS4B
STIM1
NAA25
LMOD3
RPS3A
SLC25A46
LOC102724265
ATXN3
SRC
SLC2A1
C16orf54
HOMER1
C16orf70
SEMA6D
COX5A
WNT7B
STX18
TOMM70
LNP1
SLC9A8
TIAM1
PTPN1
KCTD12
PICALM
GKN1
BMP5
KCNJ15
SLC10A5
IMPA1
G2E3
KEAP1
UBXN11
KRTAP3-2
KRTAP3-1
KRTAP3-3
PIK3R3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
ZNF436
STMP1
FGF1
TMEM250
GSN
PTGES2
CAMK2G
NUBP1
LOXL4
C2orf83
KRTAP5-11
CRACR2B
TSPAN4
POLR2L
CPNE6
CD151