ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671296 | NAMEC8
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◣ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

ABLIM3
ANGPTL4
ID1
DHRS3
SYS1
DUX4
WSB2
BIN1
FRG2C
ADSS1
CRTC1
SOAT2
IGFBP6
RXRA
GFOD1
FRG2
BHLHE40
ALDH3A1
STX16
CHRNA3
FHL2
CETP
PSAT1
CASTOR1
MIDEAS
IL1R1
EAPP
URB1
SCHIP1
STRA6
MTRNR2L1
CDKN1A
ITGB2
TOX2
ROS1
ABCC10
IER3
FLOT1
PECAM1
TGM2
FASN
MXD4
LAPTM5
APOL6
SYT8
RPTN
SH3PXD2A
VSIR
TNNI2
CTNNBL1
PSCA
SLC37A2
VGLL4
PHC2
TTPAL
STN1
PTCH1
UBC
PFKP
WDR86
TIGD2
AFAP1
LOC389199
KRT31
LAMA5
SEPTIN9
EREG
PEX11A
PLIN1
WDR93
TMEM242
TRIM55
SAMSN1
ACACA
DUSP1
ASB2
ACSL4
SERPINE1
NEURL1B
ARID3B
KLHL2
IP6K3
UQCRHL
BCL2L1
DRD4
DLG1
FTH1
SPAAR
HRCT1
ART1
SREBF1
LRRC57
HAUS2
ACSL1
EIF2AK2
CCDC200
HIF3A
TRIB1
SNAPC1
KANK2
C3
LPCAT3
KLRC3
TTI1
RPRD1B
PTPRE
FBXO46
SQSTM1
ZNF462
NRCAM
ARL14EPL
TANK
H6PD
IL34
SLC41A3
SLC17A3
ZMYND8
PPL
NFKBIA
CCND3
TAF8
STAT1
MGAT3
C7orf65
KANK1
BCL3
CCL20
TBC1D19
TNFRSF10B
MACC1
TUBB
MDC1
CRACR2B
PNPLA2
VPS72
PIP5K1A
PADI3
ZNF367
SLC20A2
SMIM19
C1QTNF1
BLM
LRRC59
IL6ST
SCAP
GPC1
PRELID3B
MT2A
H4C12
H4C11
H2BC15
H2AC15
LIPM
MFSD10
EDEM1
ITPKC
COQ8B
CSF3R
APOC1
APOE
UBE2V1
SLC9A8
RAPGEF3
RFC4
CDCA7L
EPC2
C11orf86
PTGES
NADK
PLAAT4
CFLAR
RARRES1
SYN3
SAC3D1
S100A2
KCNE1
MOB1A
DNAJB2
RRM1
NPM1
NAA38
CHD3
PSAP
ALAS1
SPATA25
NEURL2
CTSA
ZSWIM1
TEX43
HSPA5
FBXO5
NFE2L2
ALOX5AP
NOLC1
POLD3
TRIOBP
CUEDC1
CSRP1
NUF2
NFIL3
ASS1
SHF
ANGPT1
NWD1
FBXO4
DPP9
USP2
PTK2B
PPARG
MRTFA
SLBP
TMEM129
TACC3
SLC20A1
SSRP1
P2RX3
LTBP2
DNAJC25-GNG10
DNAJC25
PPP1R32
TVP23B
UPP1
NUP50
TACSTD2
TBC1D16
CCDC40
BCAR1
RANBP3
RAD54L
USPL1
HMGB1
GGT5
KNL1
NFIC
SMIM14
CDK5RAP1
FAM227B
DTWD1
PRTN3
ELANE
CFD
ATAD2
PRMT5
SCNN1A
LTBR
TMEM138
CYB561A3
WDR74
STX5
SH3BP2
NIBAN2
MUC5AC
CP
METTL15
KIF18A
RP1L1
ALDH3B1
SAR1B
UNC93B1
OSBPL3
TMEM106C
TTC39C
TBL1X
PLEKHG6
CAT
NRP1
CLDN4
METTL27
ANXA2
PAX8
TTC12
GBE1
IRF2BP2
CTSD
DTNA
TPCN1
LTBP3
TNS4
LEO1
ARHGEF3
RARA
EPB41L1
STX18
KATNAL2
FAM184A
ITGB5
MYEOV
FOXP1
DCP1A
SOCS3
TNIP1
GADD45A
BCL7A
PPP1R3C
LSP1
ZNF207
C17orf75
SAA1
ITGB6
EPM2A
ARHGAP22
CNIH1
SOCS2
APOBEC3H
DNAJC5B
EIF4A3
TNK2
NR1H3
ACP2
KLF9
RPL37
CARD6
HNRNPF
WDR36
SUMF1
ECHDC3
TTYH3
LDLR
MTF2
IRF6
CDCA4
TUBA1B
ABCC3
PARP2
CCNB1IP1
NCOA5
RFC1
ANKRD36C
RASD2
MACROH2A1
NCAPH2
LMF2
PLEKHA7
SOD2
ZNF385B
ITGB3BP
EFCAB7
MAMDC2
CDC14B
SLC44A1
USP3
SRP14
ZC2HC1C
ACYP1
LURAP1L
TUBGCP3
LOC112694756
ERCC1
NRG4
VAPB
EBAG9
SLC35F6
PPP1R15B
FOXK1
ARNT
MNAT1
KLRK1
SMIM38
CDC7
POLG
BAG3
CPT1A
ABCG1
IFNGR2
PCNA
CDS2
TMEM230
BRMS1
B4GAT1
IL7R
UCP3
RCL1
SLC27A3
MICALL1
RPH3AL
CSNK1D
DCAF10
PHKA1
CAV3
PPP3CA
PMEPA1
H4C15
H4C14
STX10
IER2
H3C15
H3C14
LIPE
H2AC19
H2AC18
SLCO4A1
BRD4
YBX3
SDC4
MRPL44
MKNK2
TINAGL1
KRT75
KRT6B
ECH1
MRPL39
RIF1
INTS12
GSTCD
PDE12
CCDC57
BCL9L
ING5
PRKAG2
SRSF6
TACO1
SLC35A3
TEFM
FXYD3
SIN3A
NDUFS7
ITGA3
AHCY
LIFR
MTRNR2L2
MSH3
DHFR
PHRF1
TRIM7
GINS3
CHD1L
PEDS1-UBE2V1
PEDS1
DENND4A
PRKAB2
SPATA12
IRX2
C5orf38
CCR7
PARD6B
PRR5L
TOP3B
ZGPAT
ARFRP1
HOXA3
GBA
HOXA4
HOXA5
FAM47E
SCARB2
TAF12
RPS29
TPD52L1
NME1-NME2
NME1
CLMN
AXL
METTL21A
PAQR6
BGLAP
SH3BP4
OPA1
ZSCAN22
KRT39
PEX19
FAM228B
TP53I3
SF3B6
SLC1A5
FAM111A
MYC
DCK
CXorf58
FOLR1
ALX4
OXT
AVP
PRKCD
JAG1
IL1A
GDNF
ACTN4
USP32
PLIN4
SLC43A3
TTC33
UQCC1
MRPS31
GPT2
JRK
LY6K
CCNL1
GIP
ZNF165
OR1F12
GSTA4
FOXS1
CCN5
NOL4L
ATP9A
MANBAL
SLC25A45
FRMD8
AAR2
KRT6A
FRA10AC1
ZBTB38
SNRPB2
ADIPOQ
KANSL3
FER1L5
MLLT1
PHLDA3
CHD1
RAD52
POLDIP3
MYBL2
MPZL1
ADNP
JUNB
FAM193B
TIMP2
FSIP2
MAFK
KLF7
ZNF436
TCAF2
TEX30
HLA-B
SYT12
LPIN3
RIN1
SLC22A5
FKBP5
VAPA
PIKFYVE
ZMIZ1
MAFF
ABHD2
PLXNB1
SKP2
LMBRD2
TMA7
CCDC51
CSTF1
AURKA
OPN4
GABRE
FAT4
STARD4
H4C8
GOT2
DUSP15
COPS8
NUP85
CCNC
STAT3
TTC32
TIMP4
ETFDH
C4orf46
KLF10
SIAH1
ANP32E
MAGOHB
MMP2
OXSR1
GLRX2
PGS1
SNRPG
FAM136A
AP5S1
LDHA
PLXDC1
TPM3
COL16A1
RFFL
HNRNPD
CD82
SLC16A1
ACAD9
SF3A3
CCDC88B
MNT
EPN1
CDKN2AIPNL
DNAJC11
SELENOH
MRPS18C
HELQ
POGLUT3
PPARD
SCARA5
SLF2
GPX4
POLR2E
RPL22
RNF207
PCGF2
PLK2
BSPRY
GRAMD4
RAMP1
GPR150
CD109
RAD51D
FNDC8
TMCO6
CD14
NDUFA2
IK
DYNLRB1
SPATS2L
KIAA1522
NOXO1
TBL3
RPS2
RNF151
C10orf88
TENT5A
ZNFX1
SIK2
RALGDS
DAB2IP
HINT3
TMEM250
HSPA6
SEC62
LRRC10B
CEL
RGS3
SLC25A18
GTF2H2C_2
ITPRIP
FOXN3
GTF2H2
CDKN2A
MYLIP
TBC1D2
ERCC6L2
ANKRD46
EXT1
SRSF2
MFSD11
PLEC
TRIB3
CXXC5
PLEKHH3
TUBG2
NKIRAS1
NR1D2
GGA2
TDG
C12orf73
NDUFC2-KCTD14
NDUFC2
HCAR3
H2AZ2
TTI2
KCNMA1
DHRS4
PMPCA
ENTR1
OXSM
NGLY1
DLC1
RDH5
DDIT4
CD63
ALKBH3
HMGN4
CCDC33
ADA
ASIP
MMP13
GPRC5A
HEBP2
ADAMTS9
NECAP2
FANCL
OR2T1
ABCA1
ARID1A
BEST1
CREB1
TAGLN2
NYX
TBL2
PSMG2
SPIRE1
NDUFAF1
TP73
CEP70
SRI
ZNF395
CEP295
KIF7
RGPD8
RGPD5
MRPS16
DNAJC9
KRT80
RGPD6
PLAAT2
MMP8
CRYAA2
CRYAA
PGM1
MDM2
SLC35E2B
FGD4
SOD1
CFAP45
THEMIS2
ANKRD60
ACSL3
CLDN9
CLDN6
TNFRSF12A
RNF223
TMEM107
FAM98B
SACM1L
MED4
COL1A1
THOC6
HCFC1R1
CALM1
FOCAD
BDKRB1
HBP1
CLCF1
HOGA1
ANKRD2
PYGB
H2BC17
H2AC17
FANCD2
OR2B2
CARD19
ARHGEF10L
DNASE1L3
SEMA7A
CAMK2D
MTRNR2L8
SYNPO
TBCEL-TECTA
TBCEL
PARL
TMEM259
CNN2
DNAJC16
CASP9
GNA12
ENTPD5
BBOF1
SSNA1
ANAPC2
NUP214
ATG7
UBAC1
CCDC83
HSP90AA1
NID2
NUDT15
KRT8
RNF145
MYPN
CYB5R4
SLC9A3R1
SEC11A
XPO5
POLH
ABCC6
STX1A
PTPRH
CLIC5
FLOT2
DHRS13
DNMBP
DTNB
XPNPEP1
SAE1
PMAIP1
DPYSL3
DRAP1
C11orf68
MT1M
MT1E
ISLR2
PDXK
SLC22A18
POLR2J3
DDX1
KBTBD7
KCTD12
PPP1R18
B4GALT1
NRM
ORAI3
SETD1A
BORCS6
SULF2
TTC4
KLF4
ZC3H10
RPL41
ESYT1
MRPL34
DDA1
ABHD8
CIAO2B
CES2
KPNA7
RRAD
USP30
CDH16
RGS19
OPRL1
LKAAEAR1
ZNF391
SLC45A4
MYL12A
MYL12B
MITD1
COA1
C11orf49
ACAA2
LOC102724770
DGCR6
MED23
ENPP3
PHYHIP
GTF2H2C
SUMF2
IGSF10
LRRC37A3
RASSF6
GALNT15
TMEM258
FEN1
GNAT1
PTCHD4
PDE4D
IQSEC3
NEMF
CRYBA1
MRPL55
HMGN2
NANOS1
SMAD3
TOR3A
HES1
AP3S2
SKI
RIN2
DSTYK
KRT86
WDR70
NUP155
PLCG1
TFDP1
LRRC63
DOT1L
TBP
PSMB1
UNKL
CSRNP1
CTAGE1
TCF19
CCHCR1
ZFP91
LPXN
SLMAP
MRM3
GLOD4
TYMSOS
TYMS
POU5F1
TSPAN4
POLR2L
C1RL
H4C3
H1-6
DPH3P1
FAM168A
KANK4
E2F7
MCMBP
OMP
ELOVL6
ATP5MC2
OSMR
GORASP2
TTC26
NEBL
COL23A1
LONP2
ABCC11
COX18
TGOLN2
CCDC80
YWHAE
OR1J4
OR1J2
CLU
CTNNB1
DNMT1
TKT
FAN1
SBNO2
NOC3L
DGAT2
RPEL1
SMG6
VAMP2
WASHC2A
PER1
DYNC1H1
ST3GAL4
MRPS5
CEBPE
RBFOX2
UCHL5
RO60
DCLRE1B
AP4B1
RBM28
NT5DC4
SHCBP1L
EIF2B3
ATF7IP
C8orf33
TLCD4
RTP3
LTF
NOP53
CXCR5
RPS6
ATXN1
ARHGEF39
CCDC107
SIT1
CTSB
DERL3
ANKK1
HAP1
SLC25A20
SH2B1
BAIAP2
ZFP36L1
PUM2
UBAP2
TMX4
TNS2
GYPC
WDR4
REXO4
ADAMTS13
PPP6R1
IRF9
SNTB2
DCAF1
EYA2
ACR
C5AR1
CCDC88A
CPEB3
RTTN
CSRP3
KIF15
KIAA1143
FEM1C
NAT14
SSC5D
NCOA7
LCA5
PNPT1
THUMPD1
STAG1
NDUFA12
FAM229A
TSSK3
CDK6
ADGRF5
RASSF5
MICALCL
DR1
GOSR1
OBI1
USP48
C8orf37
GPX1
ABHD17A
DNAL4
LUZP1
CSTF2T
FLYWCH2
DGKD
DUSP10
PRKCE
UPF3A
LUC7L2
CTSC
LIMK1