ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475135 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◣ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

PER2
VAMP2
PER1
DUX4
NKIRAS1
NR1D2
GET4
ZNF595
FRG2C
CRY2
CRY1
MTRNR2L1
PLD6
OLFML2A
NR6A1
ART1
RALGDS
RNASEH2C
KAT5
FRG2
TSPAN31
MARCHF9
CDK4
TRAPPC6A
BLOC1S3
LAMP1
MRPL40
HIRA
NR1D1
ANKRD12
FCGR3A
SLC25A17
SNAP29
PI4KA
CLCN7
DBP
CA11
NOL8
CENPP
GTF3A
TEF
RAD9A
PPP1CA
OPLAH
LOC102724770
DGCR6
CDK19
AMD1
PHRF1
MTHFR
CLCN6
PDXK
SPATA9
RHOBTB3
COMMD8
CFLAR
FZD5
FCGR1A
CREBRF
NPTN
EIF5A2
ELAVL3
MARCHF8
UBE3C
CPEB1
PER3
TMEM185B
KHDRBS1
FOLR1
HPS5
GTF2H1
UAP1L1
CLCA1
SAPCD2
TXNIP
PDZK1IP1
OSGIN1
CAMKK1
LRRC56
HRAS
FOSL1
FIBP
CCDC85B
AXDND1
SLC25A13
TMEM116
ERP29
RPUSD4
FAM118B
GGA2
PC
SLC35F6
FAM131B
SHKBP1
MTRNR2L2
MSH3
DHFR
NDUFAB1
PNP
PIP4P1
OSGEP
APEX1
SNRPE
STX4
TREML4
DCP1A
MESP2
WASHC2C
THRA
ZNF292
HPS1
SUMO3
COL23A1
SLC35A5
ATG3
TERT
ILF3
RELN
RRAGC
SPNS1
LAT
AP5S1
TANGO2
ARVCF
GSN
VPS26A
SLC35B2
HSP90AB1
NFKBIE
ZNF331
EPB41
SLC6A9
AP5Z1
MAP11
LAMTOR4
CEP63
ANAPC13
CCDC116
GLS
ATG9B
ABCB8
GYG1
RHCE
NAGLU
USP48
CLPX
MARCHF2
LAG3
SUMF1
LEP
ZSWIM1
SPATA25
NEURL2
CTSA
SEPTIN5
GP1BB
UTP11
FHL3
LZTR1
RNASEK
C17orf49
SYNGAP1
PHF1
CUTA
SULT2A1
CFAP157
USP17L22
USP17L21
USP17L20
USP17L12
C1orf116
HERC1
HES4
TBC1D24
NTN3
ARRDC4
P4HB
SNRPA
C19orf54
DPH2
B4GALT2
ATP6V0B
HLF
RNASET2
CXCL2
FBXO11
GNPDA1
ATP5F1E
WDR62
THAP8
UBE2Q1
CHRNB2
SCAMP4
ADAT3
SS18L1
PSMA7
RMND1
ARMT1
GBE1
ZNF367
SAFB2
SAFB
SYNRG
ITLN2
SLC49A4
HSPBAP1
HBP1
ZNF84
TRIP6
SRRT
ATAD3A
TRAPPC2L
GALNS
ZNF239
BLOC1S6
DNPH1
PIGW
MYO19
GGNBP2
VPS33A
WTAP
SOD2
NAPA
WASHC2A
HACL1
BTD
TMEM183A
NUP214
PPIL2
SLC33A1
PTBP1
THAP7
CLN6
NUDCD3
TMEM265
PHKG2
ATP8B2
AQP10
CDC16
UCKL1
UCP2
TRPC4AP
HNRNPF
IFNL4
IFNL2
MFN2
DUSP7
PRDX6
PRAME
GTPBP6
NPPA
RGS20
ATP6V1H
CRYAA2
CRYAA
KDM4C
NPIPB15
LDHA
ARID3B
PPAT
PAICS
UBE2L3
RIMBP3C
RIMBP3B
SERINC4
SERF2
HYPK
ENG
MTCH2
ZNF280A
PPP1R35
OSCAR
NDUFA3
THNSL1
LONP1
CATSPERD
AGAP11
ADIRF
CIART
C1orf54
CLUAP1
C16orf90
RORC
C2CD4D
CD22
BHLHE40
BCAR1
IGFBP4
RIPOR3
PFDN4
YPEL5
SLCO4A1
FOXJ2
CEP112
BCAS3
MAPK6
PLEKHF2
RNF43
DOCK6
IGSF8
PMEPA1
HOXC13
TRIM37
CSDE1
LNX1
FAM76A
PIK3IP1
HOOK2
POLG2
DDX5
ERCC6L2
TRPV4
SPATC1
AVPI1
UVRAG
SLC20A1
ARFGEF2
VPS11
USP32
UBE2B
CDKL3
PPL
EMC2
MAP2K7
ISOC2
HIF1A
P2RX2
LRCOL1
SPG21
DAZAP2
MAP1LC3B
FBXO31
CDK12
DDX42
CCDC47
PLEKHG5
SMIM6
SMIM5
RPEL1
PTEN
KLLN
PPP1R3C
TRAPPC10
SETD1B
RHOF
MAPKAPK3
CISH
S100A13
S100A1
CHTOP
MTHFD1L
FNIP1
NPR3
DENR
APPBP2
LRATD2
INAFM1
KMT2E
MICALL2
VGF
PPM1D
AP1S1
UBAP2L
C1orf43
PNPLA7
MRPL41
PMS2
AIMP2
G3BP1
RFESD
EIF3B
MED1
FAM117B
ZNRF2
CEBPB
MORF4L1
NAA80
IFRD2
HYAL3
TNNI3
DNAAF3
ALG13
CCDC24
SRP54
SPHK2
UTP18
MBTD1
PRLH
NCOA3
TEKT3
PRORP
PPP2R3C
GMFB
EPC1
BCAM
MAPK1IP1L
B3GNTL1
NME1-NME2
NME1
BRIP1
PRKAR1A
TIMM22
SDR39U1
ZNF438
PLEC
USP8
DPP3
SRSF1
LSM12
G6PC3
GTF2A1
ZNF263
MAMDC2
KDM6B
TRMO
TBX2
SNAPC1
TRIQK
ADNP2
RCCD1
NFX1
XPOT
CSTF1
AURKA
COQ10B
HMGB2
GSK3B
TOB1
HERC3
SLC25A36
TKTL1
TEX28
SRSF5
TMEM231
GABARAPL2
MAP4K1
EIF3K
THOC7
ATXN7
PRPF3
ATXN2
TTYH1
FLCN
CHFR
EAPP
TMEM18
CLTC
USP36
PSMD5
SLC22A5
SYCP2
PPP1R3D
IP6K1
FAM217B
LYRM9
KLF1
GCDH
DNASE2
TUBD1
RPS6KB1
ZMYND8
RIN1
LRFN4
FAM214A
TCF25
TPD52L2
ABHD16B
AFAP1
CCNL1
DISP3
DACT3
ARRDC3
SLC25A25
ZBTB37
BCAS4
RAB17
RRP36
MEA1
KLHDC3
YBX2
GNG14
DHPS
ZNF706
PDE12
PTCD3
POLR1A
NXT1
GZF1
SRCAP
LOC730183
PUM2
CTTN
SENP8
MYO9A
TRAPPC9
NAPRT
MROH6
GPD1
COX14
EPM2A
COL6A2
FAM214B
NRAS
SCAF11
CLN3
APOBR
SEPTIN2
HDLBP
MADD
CYP2W1
THAP5
DNAJB9
NTN5
ELF3
PAF1
KCNIP2
NBN
RNF13
COL6A1
STAT6
ZNF687
ZC3H4
SLC2A4RG
SBNO2
LIME1
EIF1
SPG7
NAA50
EED
ATP6V1A
RMI1
HNRNPK
FZD1
BCLAF1
TRIB1
SPTBN4
BLVRB
GABARAP
TMEM187
HCFC1
TM9SF1
IPO4
POLI
MYL12A
RPS11
RPL13A
HEXA
TBC1D17
PNKP
CMC2
CENPN
AKT1S1
ZZZ3
ZFP36
PLEKHG2
RRAGB
SLC25A39
PRR5L
COMMD9
EIF4B
PPFIA4
H4C9
H2BC12
H2AC12
OPRL1
HSF2
MVB12A
PSMD6
SPAAR
NTMT1
HRCT1
C9orf50
TBCEL-TECTA
TBCEL
RTEL1
CNOT3
NFYC
CNNM2
ARIH1
CFAP251
CHMP2B
EPB41L4B
CD164
LPCAT1
UNC13D
MAN2B2
SULF2
MED13
PNO1
SLC35C2
RFX3
CD55
SETD1A
ORAI3
MRPS23
UNK
H3-3B
ZCWPW1
MEPCE
LFNG
SLC25A26
PARD6B
DHX40
RIMBP2
EFR3B
NOP14
GRK4
BTNL9
BRPF1
TMEM141
FNBP4
CCDC183
SLC3A2
DGAT2
DBNL
SNX5
MGME1
NAIF1
CDIPT
LAMC1
C6orf62
TENT5B
ERCC1
POLD1
NR1H2
SMIM41
ATG101
YEATS4
ISG20
HNRNPA2B1
CBX3
H4C15
H4C14
H3C15
H3C14
ZNF335
SRP9
CASC3
TUFT1
RGS19
MCM7
LKAAEAR1
BAX
AP4M1
TSSK4
TACR2
TIPARP
FOXO6
EXOSC5
BCKDHA
ZNF778
TCP11L2
RNF223
KLF11
TRIM8
SULT1A4
SULT1A3
TMEM52
CALML6
PKD1L3
DHODH
TM4SF1
HNRNPH2
LCN12
LARP1
HDAC4
FBXW5
C8G
RPSA
PRKCI
FAM178B
GABPB2
MEFV
EIF4A1
CD68
COLEC11
CAP1
H2AC18
ESYT3
RBBP5
MAPK15
MTRNR2L8
ITGB1
SIT1
MAF1
CYC1
CCDC107
ARHGEF39
PPP4R3B
CLN8
TUBA1B
SYNJ2BP-COX16
SYNJ2BP
ILVBL
GALR1
PDXDC1
MAL2
SRA1
SLC35A4
POLR1D
LNX2
KAT7
APBB3
SLX1B
SLX1A
BOLA2B
BOLA2
ZFP91
LPXN
CENPA
ENSA
TCERG1
CLK1
ADK
GFRA3
TUBA1C
ZFYVE28
GREB1
CFAP99
ZHX2
TMEM53
SYNCRIP
ARMH1
DDX3X
MOCS3
MAX
DPM1
PHF23
DVL2
CTDSP2
SREK1
RAD50
KLHL12
STXBP4
COX11
EMP3
CCDC114
RNF139
RBBP6
YARS1
S100PBP
ZBTB7B
LENEP
MMADHC
MZF1
WDR89
YWHAZ
ADGRB1
ZFP1
SLC43A2
PCBP1
DDX59
TBC1D13
SKA2
PRR11
LGI1
SPPL3
VMP1
PTRH2
GNAS
TADA3
ARPC4-TTLL3
ARPC4
AGAP2
SLC39A6
SEPTIN9
IGSF21
CD2BP2
H2AC19
PTPRN2
ATIC
XRN2
THRAP3
SLC25A24
RLF
L3HYPDH
JKAMP
CYB561
RPS29
PIM3
NEMF
EIF4G1
SCAF1
RRAS
PPM1A
CIPC
PLA2G1B
INO80
EIF5
TMCC1
SLC25A11
RNF167
PFN1
FBXO46
PPP1R13L
POLR1G
HEXIM2
GP1BA
EIF4A2
DLX4
ECH1
SPATA2
PRC1
PEX14
DFFA
CALM2
FBXO5
LUC7L2
PDP2
STAM2
RNMT
FAM210A
COPS7A
TJP2
BOLA2-SMG1P6
STMN1
BCL6
STOML2
PIGO
NDUFS6
MRPL36
MLH1
EPM2AIP1
HES1
KPNA2
TBC1D15
TSTD2
NCBP1
SGO1
ATP6V0C
AMDHD2
UBR5
SMARCD2
ARID3A
PCBP3
ZNF219
TMEM253
PDCD6IP
PTP4A1
MIOX
ADM2
SPAG9
ASPH
GART
DDX43
PPIA
STX6
BCAS1
NSUN3
DHFR2
PRKDC
MCM4
GPBP1
FAM53C
CDC25C
COX19
TMEM129
TACC3
SLBP
TRMT112
PRDX5
PACSIN3
NPM1
USP9X
TRIM59
CSRNP1
ATOH8
ANAPC7
SLC25A19
EIF3E
TATDN2
TARDBP
HIRIP3
UBQLN1
HNRNPA1
CBX5
CHKA
KLF10
RBM3
PPP2R5C
PABPC1
ZFP62
MTDH
FBXL18
RNFT1
NEMP1
PSME3
BECN1
MED26
RTN4RL1
DPH1
NAMPT
AEN
JUNB
FBXO33
TUBGCP5
FBXW4
DNAJB1
PAK1IP1
C6orf52
TRA2A
ADGRE5
OSGIN2
TMEM88
NAA38
HNRNPC
CYB5D1
ATF7-NPFF
ATF7
SLC25A10
MRPL12
SV2A
RIPK2
UQCRC2
ALDOA
TEDC1
PCNT
CRIP1
C21orf58
AP1G1
GPRC5A
KDM2A
SIRT4
CACYBP
PPP1R15B
PRMT2
PHB2
PLXDC1
MCCC1
IREB2
DDX23
PCIF1
STX16
LY6L
ERGIC2
DEF6
DNAJA3
CORO7-PAM16
CORO7
LRCH4
FBXO24
CYTH2
SARAF
GCLC
TMED10
DCBLD1
ZNF217
CCDC86
TFAP4
POLR2J3
WDR6
PES1
SHISA5
GATAD2A
ARL4A
LAMTOR1
FCMR
ANAPC15
ZNF384
WDR74
STX5
FAF1
CDKN2C
MYL6B
MYL6
U2AF2
CCDC106
TRAF3IP3
PARP10
MUC3A
GRINA
BCL9L
HS3ST3B1
UBALD1
MGRN1
SPTSSB
LTV1
SMG9
SERINC3
PMVK
PKIG
PGP
MLST8
E4F1
BRICD5
RNF31
PSME2
FAF2
EMC9
ARF6
SLC12A4
HSPH1
SETDB1
PHF12
HSF1
BOP1
DUSP1
GSTT2B
GSTT2
DDT