ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457295 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◣ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

TSPAN31
MARCHF9
CDK4
GET4
PLD6
RNASEH2C
KAT5
CRY2
AP5S1
AGAP11
ADIRF
PER2
CRY1
CLUAP1
C16orf90
VAMP2
PER1
NKIRAS1
NR1D2
CIART
C1orf54
GSN
DBP
CA11
RALGDS
CD22
PNP
PIP4P1
OSGEP
APEX1
IGFBP4
NPTN
BCAR1
RORC
C2CD4D
LAMP1
RAD9A
PPP1CA
TRAPPC6A
BLOC1S3
CLCN7
COMMD8
SLC35A5
ATG3
ANKRD12
CDK12
MED1
CEP112
DUX4
HOXC13
PHRF1
LRRC56
HRAS
BHLHE40
SNRPE
TMEM116
ERP29
OLFML2A
NR6A1
KHDRBS1
DENR
RIPOR3
MAPK6
TEF
GTF3A
PTBP1
DOCK6
SLCO4A1
RNF43
ZNF292
ELAVL3
YPEL5
VPS11
NOL8
CENPP
AP5Z1
HPS5
GTF2H1
ARFGEF2
NR1D1
PIK3IP1
LAG3
EIF5A2
MTHFR
CLCN6
TRPV4
WASHC2A
PER3
ART1
EPB41
PLEKHF2
STX4
UVRAG
IGSF8
TRAPPC10
FAM76A
UBE2B
CDKL3
HOOK2
PSMD5
ERCC6L2
RPUSD4
FAM118B
EMC2
PMEPA1
VPS26A
LNX1
CLN6
RNASEK
C17orf49
SPATC1
FRG2C
SPG21
SLC35B2
HSP90AB1
NFKBIE
SMIM6
SMIM5
SETD1B
RHOF
SHKBP1
MICALL2
FOXJ2
SLC33A1
MAP2K7
TRIM37
TRAPPC2L
GALNS
VGF
AP1S1
OSGIN1
AVPI1
WASHC2C
SNRPA
C19orf54
NAA80
IFRD2
HYAL3
TXNIP
PRLH
IP6K1
ZNF331
HES4
MAPKAPK3
CISH
PFDN4
BCAS3
MAP4K1
EIF3K
TMEM185B
RGS20
ATP6V1H
YBX2
P2RX2
LRCOL1
ARRDC4
PTEN
KLLN
TNNI3
DNAAF3
SPNS1
LAT
GYG1
RPS11
RPL13A
PPP1R3C
SERINC4
SERF2
HYPK
WDR62
THAP8
TMEM265
PHKG2
PRDX6
TMEM18
B3GNTL1
PLEKHG5
UBAP2L
C1orf43
ISOC2
NOP14
GRK4
SLC20A1
ILF3
TUBGCP5
FNIP1
PNPLA7
MRPL41
SPPL3
MRPS23
TRIM59
ATAD3A
SPHK2
HIF1A
KLF1
GCDH
DNASE2
USP8
ZNF438
UBE2Q1
CHRNB2
SLC25A13
KDM4C
TBCEL-TECTA
TBCEL
BCAM
ADNP2
ZSWIM1
SPATA25
NEURL2
CTSA
NPR3
SLC22A5
SLC25A26
ATP6V0C
AMDHD2
RIN1
GMFB
HERC3
PRR5L
COMMD9
ZNRF2
STAT6
ZMYM4
FOSL1
FIBP
CCDC85B
USP32
FAM117B
PMS2
AIMP2
CLN3
APOBR
RRAGB
RAB17
PC
CREBRF
RMND1
ARMT1
DPP3
TIMM22
PDE12
BAX
TEKT3
TRMO
FOXO6
MAP1LC3B
FBXO31
SLC25A36
EPM2A
CSTF1
AURKA
IGSF21
SLC25A11
RNF167
PFN1
GP1BA
MTHFD1L
NUDCD3
CCDC24
SENP8
MYO9A
NME1-NME2
NME1
LCN12
FBXW5
C8G
SUMF1
MYDGF
FZD1
CFAP251
GTF2A1
DBNL
LYRM9
IREB2
NAPRT
MROH6
LRFN4
CEP63
ANAPC13
KDM6B
TBC1D13
CAMKK1
ADGRB1
ZZZ3
FRG2
LSM12
G6PC3
ZNF84
GTPBP6
SBNO2
THAP5
DNAJB9
RTEL1
KLF11
HEXA
EFR3B
THRAP3
NXT1
GZF1
SEL1L2
MACROD2
CRYAA2
CRYAA
CTTN
ATXN2
PUM2
DACT3
TACR2
DPH2
B4GALT2
ATP6V0B
TCP11L2
EPB41L4B
PPL
GABARAP
PHF23
DVL2
ZNHIT1
PLOD3
LAMC1
GFRA3
TRIM8
AEN
LPCAT1
TMEM231
GABARAPL2
HES1
POLG2
DDX5
FAM214A
KLHL12
RFESD
SLC25A10
MRPL12
CEBPB
ZBTB37
MAL2
PEX14
DFFA
TOR2A
UTP18
MBTD1
KCNIP2
MTCH2
EIF4G1
CLN8
MIOX
ADM2
VPS33A
MAX
ZNF263
SYCP2
PPP1R3D
FAM217B
PPFIA4
TBC1D17
PNKP
AKT1S1
WDR89
MVB12A
ISG20
ANKFY1
RNF223
SPTBN4
BLVRB
ADGRE5
GPD1
COX14
OSBPL1A
SLC49A4
HSPBAP1
ZNF706
ATOH8
SYNGAP1
PHF1
CUTA
RRP36
MEA1
KLHDC3
ARF3
AFAP1
HNRNPH2
GCLC
SCAMP4
ADAT3
MTDH
CCNB1
TMEM52
CALML6
PLA2G1B
GREB1
POLI
ASPH
INO80
HBP1
PKD1L3
DHODH
ZC3H4
USP36
XRN2
SRP54
RIMBP2
GBE1
DLX4
SGO1
SPAAR
HRCT1
TMEM129
TACC3
SLBP
CCDC86
SLC2A4RG
LIME1
ELF3
TBX2
ARID3A
PSME3
BECN1
RRAGC
POR
STRIP1
GGA2
STMN1
DISP3
LGI1
TJP2
GSTP1
STYXL1
FAM178B
YARS1
S100PBP
ESYT3
MAPK15
C1orf174
SCAF11
ZHX2
INSIG2
SLC26A8
MAPK14
FOXN4
SPG7
MTRNR2L1
IGFL1
G3BP1
STXBP4
COX11
NDUFS6
MRPL36
HUWE1
SRA1
SLC35A4
APBB3
ALG13
NPIPB15
RAD50
TXNRD1
UCKL1
RPEL1
TBC1D15
NFX1
CNNM2
FLCN
EIF3B
H4C9
H2BC12
H2AC12
MEFV
DGAT2
PIM3
CYB561
CPNE7
CCDC116
TMEM88
NAA38
CYB5D1
LTV1
EIF4A1
CD68
PABPC1
SLC12A4
PRRG2
NOSIP
PNPO
ATP13A3
SMARCD2
THNSL1
COPS7A
CBFA2T2
PPAT
PAICS
HS3ST3B1
PDP2
TIPARP
C15orf39
HSF2
OR2B11
NTMT1
C9orf50
ATIC
SOCS5
PACSIN3
ERGIC2
PIK3R3
CLTC
TRIB1
RNF13
ABCA3
KDM2A
NAT10
SLC25A39
CD164
TDRD1
CCDC186
KCNA2
STX6
UBR5
GSTT2B
GSTT2
DDT
DDTL
TMEM53
ARMH1
TOP3A
SMCR8
JUNB
CCDC6
TBC1D30
GNS
RBBP6
TATDN2
OPRL1
RGS19
LKAAEAR1
ZNF219
TMEM253
STX16
PRPF3
RRP9
PARP3
PPM1H
CHFR
ERCC1
NAMPT
DHX40
MFSD4B
GALNT18
RPSA
PDPR
EXOSC5
BCKDHA
SIT1
CCDC107
ARHGEF39
ORC4
MBD5
UPF3A
PRSS16
FAM214B
DCBLD1
KPNA3
NSUN3
DHFR2
DEF6
TRAF3IP3
TIPIN
CIB3
SYNRG
PPP4R3B
ZFP36
PLEKHG2
CC2D1B
TRIP6
SRRT
ADCK1
ZBTB6
RC3H2
NCOA3
CMC2
CENPN
SLC25A19
ZNF57
TENT5B
THAP6
CENPA
HES7
ALOXE3
CA4
RTN4RL1
DPH1
PDK2
NECTIN4
KPNA2
HNRNPA1
CBX5
HPS1
TARDBP
SHOX2
APPBP2
SLC25A25
LOXL3
DOK1
LFNG
UBN1
GLYR1
ALCAM
SLC39A6
GOLIM4
SLC5A6
CAD
ATRAID
ARL4A
CD37
TANC2
NAPA
CASTOR1
ASB2
MED16
DEFB116
UCP2
LOC102724770
DGCR6
BCAS1
TMEM184A
IQSEC1
SLC12A6
NUTM1
NOP10
TPD52L2
ABHD16B
SMIM41
ATG101
TOR3A
ILVBL
CSRNP1
NFKBIL1
DDX39B
ATP6V1G2
WDR77
ATP5PB
PARD6B
HDAC4
MLH1
EPM2AIP1
YIF1A
TMEM151A
C5orf51
VILL
SPATA2L
AIG1
SETD6
CHKA
ATF7-NPFF
ATF7
PRKAR1A
MARCHF8
PSMD6
DDX3X
MRPS18B
ATAT1
LIN54
TBL1X
KCTD9
CDCA2
POLR1D
LNX2
ZFPM1
SCAP
PPM1D
TMEM79
SMG5
MAP11
LAMTOR4
ACAD9
PTCD3
POLR1A
L3HYPDH
JKAMP
SPAG9
NUP188
DOLK
YOD1
PFKFB2
ZNF286A
TNPO2
SLC26A9
CMTR2
FBXO5
USP17L22
USP17L21
USP17L20
USP17L12
SLC35E2A
SNAI1
MAGT1
COX7B
TRAPPC9
MICOS10-NBL1
MICOS10
PNO1
ATP5MC1
WDSUB1
SAC3D1
BCAS4
ATP9B
GPRASP1
MCCC1
BTBD10
PLD3
C19orf47
ADK
VMP1
PTRH2
TMEM248
RAB24
PRELID1
MXD3
HMGN2
MYL12A
LAMTOR1
ANAPC15
C9orf62
COA7
SNAPC1
RCCD1
MICU1
PRKAG2
AGPAT2
PUF60
MRPL40
HIRA
ZNF778
RNF26
C1QTNF5
FCMR
LONP1
CATSPERD
GIPC1
HNRNPD
DOK7
SUPV3L1
NCOA4
PLEC
TET3
UTP20
SIRT1
MRPL45
SF1
ASB13
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MTMR14
LOC112577592
TIMM44
SOX12
ACAP2
FAM200B
SKA3
MRPL57
PSMG1
PFAS
SLC39A2
METTL17
FBXO33
ATL2
MEF2D
ATAD2
DYRK3
WIPI1
SLC45A4
TSTD2
NCBP1
STAT1
WASHC4
GDI2
NMRAL1
HMOX2
FAF1
CDKN2C
DCAKD
NUDT1
MRM2
MAD1L1
AMMECR1L
PDIA4
COLEC11
NRDC
ADGRE2
SNX8
TSPYL6
SAE1
SLC39A4
CPSF1
SETD4
CBR1
RBBP8NL
STXBP1
BNIP5
SPTSSB
SH3GL3
PRORP
PPP2R3C
NRAS
ZFP62
TCFL5
PTDSS1
MTERF3
TTC32
PRR7
DBN1
NPM1
LPIN3
SRSF10
HSPH1
VPS8
ERICH6
ZBTB10
ARMCX5-GPRASP2
CDC5L
ATP6V1C1
GPRASP2
BHLHB9
CCNA2
LARP1
TCERG1
GPHN
C6orf62
PPIA
FOS
SPATC1L
NADK
RGS22
KHSRP
PHACTR3
PDXDC1
NOCT
TMEM94
IRF2BP1
GSKIP
ATG2B
MAF1
CYC1
HPSE
DHDDS
DDX42
CCDC47
CDIPT
GLS
RAD23A
CALR
SH3BP2
FZR1
DOHH
DNAJB5
OR11H7
OR11H4
CHST5
MADD
ZBTB7B
LENEP
FNTB
LRP6
MDN1
CASP8AP2
TM4SF1
PSMG4
RSAD1
LUC7L2
BCL6
PKNOX1
ZNF408
ARHGAP1
UGDH
WTAP
SOD2
CALM2
PGP
MLST8
E4F1
BRICD5
XKR9
LACTB2
MUC20
FUBP1
DNAJB4
CAMLG
GPSM2
METTL1
EEF1AKMT3
CYP27B1
DUSP7
TUBD1
RPS6KB1
EHMT1
ARRDC1
PTPRH
RNF34
RAB40B
EIF3E
PPP1R32
BMF
COL26A1
RBBP5
RPS29
MCCC2
PPP1R13L
POLR1G
RPL27
IFI35
RNFT1
BCL9L
BRWD1
MET
CNPY2
AKAP10
TCTEX1D4
PLK3
BTBD19
ZNF165
OR1F12
WDR25
WARS1
PELP1
ARRB2
MYEOV
RPP25
PPM1A
ABHD2
C12orf45
FKBP4
TMEM164
VEGFB
PPP1R14B
LOC114841035
FKBP2
OSBPL2
CAMKK2
CNOT3
ROPN1B
FURIN
FGGY
SIDT2
TMEM80
DEAF1
STAG1
TPTEP2-CSNK1E
ANKRD40CL
CACHD1
TWIST2
PYCR3
PUSL1
GFUS
ACAP3
COQ10B
PES1
STK35
RBM15
RMND5B
HOXB8
HOXB7
HOXB6
FOXRED2
UNC93B1
ALDH3B1
SLC6A19
SLC36A1
ESRP1
ISCA1
PPARGC1A
MESP1
KLF10
MUC3A
METTL23
JMJD6
WWOX
ZNF248
TFF1
GRIA1
TTLL4
AHCTF1
BTNL9
SGK3
STMN3
GIT2
ANKRD13A
CASC3
CANX
ITPRID2
RPS19
CRYM
GATA5
NEMP1
NAB2
BMP7