ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1393087 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◣ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

NKIRAS1
NR1D2
TEF
AGAP11
ADIRF
PER2
PER3
AP5S1
NR1D1
DBP
CA11
VAMP2
PER1
CPEB1
CRY2
BHLHE40
FRG2
FRG2C
MTRNR2L1
DUX4
COL23A1
LAMP1
NEMF
ANKRD12
RALGDS
FOXJ2
KLF11
GET4
PPL
NPTN
MTHFD1L
EIF5A2
PIK3IP1
OLFML2A
NR6A1
FAM214B
NPIPB15
CRY1
CIART
C1orf54
PLD6
RNASEH2C
KAT5
TSPAN31
MARCHF9
CDK4
CLUAP1
C16orf90
TRAPPC6A
BLOC1S3
RORC
C2CD4D
CD22
PNP
PIP4P1
OSGEP
APEX1
GSN
SNRPE
LOC102724770
DGCR6
BCAR1
IGFBP4
NOL8
CENPP
RIPOR3
ART1
RAD9A
PPP1CA
OSGIN1
SLC35A5
ATG3
PFDN4
YPEL5
TMEM116
ERP29
COMMD8
LRRC56
HRAS
SLCO4A1
CEP112
PTBP1
KHDRBS1
BCAS3
MAPK6
PLEKHF2
CLN6
RNF43
DOCK6
IGSF8
HPS5
GTF2H1
PMEPA1
CLCN7
HOXC13
TXNIP
TRIM37
CSDE1
LNX1
FAM76A
HOOK2
EPB41
POLG2
DDX5
GTF3A
ELAVL3
ERCC6L2
PHRF1
SHKBP1
TRPV4
LAG3
SPATC1
MTHFR
CLCN6
ZNF292
STX4
AVPI1
UVRAG
SLC20A1
ARRDC4
ARFGEF2
VPS11
USP32
UBE2B
CDKL3
EMC2
VPS26A
MAP2K7
ISOC2
RNASEK
C17orf49
HIF1A
P2RX2
LRCOL1
AP5Z1
SPG21
DAZAP2
CRYAA2
CRYAA
MAP1LC3B
FBXO31
ILF3
FOSL1
FIBP
CCDC85B
CDK12
DDX42
CCDC47
PLEKHG5
SMIM6
SMIM5
ZNF595
RPEL1
WASHC2A
PTEN
KLLN
PPP1R3C
TRAPPC10
SETD1B
RHOF
MAPKAPK3
CISH
S100A13
S100A1
CHTOP
HES4
FNIP1
NPR3
SNRPA
C19orf54
DENR
APPBP2
PC
LRATD2
TMEM265
PHKG2
SERINC4
SERF2
HYPK
INAFM1
KMT2E
MICALL2
CAMKK1
TRAPPC2L
GALNS
VGF
PPM1D
AP1S1
UBAP2L
C1orf43
PNPLA7
MRPL41
MRPL40
HIRA
PMS2
AIMP2
G3BP1
SLC35B2
HSP90AB1
RFESD
EIF3B
SLC33A1
SLC25A13
RPUSD4
FAM118B
NUDCD3
MED1
WASHC2C
FAM117B
ZNRF2
CEBPB
ZNF331
CREBRF
MORF4L1
NAA80
IFRD2
HYAL3
TNNI3
DNAAF3
ALG13
CCDC24
PRDX6
SRP54
SPHK2
UTP18
MBTD1
CEP63
ANAPC13
PRLH
NCOA3
NFKBIE
SPNS1
LAT
WDR62
THAP8
TEKT3
PRORP
PPP2R3C
GMFB
EPC1
BCAM
MAPK1IP1L
TMEM185B
B3GNTL1
NME1-NME2
NME1
BRIP1
PRKAR1A
TIMM22
GTPBP6
SDR39U1
ZNF438
PLEC
HBP1
USP8
DPP3
SRSF1
LSM12
G6PC3
GTF2A1
ZNF263
RRAGC
MAMDC2
KDM6B
TRMO
TBX2
SNAPC1
RGS20
ATP6V1H
TRIQK
ADNP2
RCCD1
NFX1
XPOT
CSTF1
AURKA
COQ10B
HMGB2
GYG1
GSK3B
TOB1
HERC3
SLC25A36
TKTL1
TEX28
SRSF5
TMEM231
GABARAPL2
MAP4K1
EIF3K
THOC7
ATXN7
PRPF3
ATXN2
TTYH1
FLCN
CHFR
EAPP
TMEM18
CLTC
USP36
GBE1
PSMD5
SLC22A5
CCDC116
SYCP2
PPP1R3D
IP6K1
FAM217B
LYRM9
KLF1
GCDH
DNASE2
TUBD1
RPS6KB1
ZMYND8
RIN1
LRFN4
FAM214A
TCF25
TPD52L2
ABHD16B
UBE2Q1
CHRNB2
AFAP1
CCNL1
DISP3
DACT3
SYNGAP1
PHF1
CUTA
ARRDC3
SLC25A25
ZBTB37
BCAS4
RAB17
RRP36
MEA1
KLHDC3
ZSWIM1
SPATA25
NEURL2
CTSA
YBX2
GNG14
DHPS
ZNF706
PDE12
TRIP6
SRRT
PTCD3
POLR1A
NXT1
GZF1
UCKL1
SRCAP
LOC730183
PUM2
CTTN
SENP8
MYO9A
TRAPPC9
NAPRT
MROH6
GPD1
COX14
EPM2A
SNAP29
PI4KA
COL6A2
NRAS
SCAF11
CLN3
APOBR
SEPTIN2
HDLBP
MADD
CYP2W1
RMND1
ARMT1
THAP5
DNAJB9
NTN5
ELF3
PAF1
THNSL1
SUMF1
KDM4C
KCNIP2
NBN
GGA2
RNF13
MARCHF8
COL6A1
STAT6
ZNF687
ZC3H4
SLC2A4RG
SBNO2
LIME1
ATAD3A
EIF1
SPG7
HNRNPF
NAA50
EED
ATP6V1A
DPH2
B4GALT2
ATP6V0B
RMI1
HNRNPK
FZD1
BCLAF1
TRIB1
SPTBN4
BLVRB
GABARAP
TMEM187
HCFC1
TM9SF1
IPO4
PPAT
PAICS
POLI
MYL12A
RPS11
RPL13A
HEXA
TBC1D17
PNKP
CMC2
CENPN
AKT1S1
ZZZ3
ZFP36
PLEKHG2
RRAGB
SLC25A39
PRR5L
COMMD9
EIF4B
PPFIA4
H4C9
H2BC12
H2AC12
OPRL1
HSF2
PPP1R35
MVB12A
PSMD6
SPAAR
NTMT1
HRCT1
C9orf50
TBCEL-TECTA
TBCEL
MTCH2
RTEL1
CNOT3
NFYC
CNNM2
UCP2
ARIH1
CFAP251
CHMP2B
EPB41L4B
CD164
LPCAT1
UNC13D
MAN2B2
SULF2
PDXK
MED13
PNO1
SLC35C2
RFX3
CD55
SETD1A
ORAI3
MRPS23
UNK
H3-3B
ZCWPW1
MEPCE
LFNG
SLC49A4
HSPBAP1
SLC25A26
PARD6B
DHX40
RIMBP2
EFR3B
NOP14
GRK4
BTNL9
BRPF1
WTAP
SOD2
TMEM141
FNBP4
CCDC183
SLC3A2
DGAT2
DBNL
SNX5
MGME1
NAIF1
CDIPT
LAMC1
C6orf62
TENT5B
ERCC1
POLD1
NR1H2
SMIM41
ATG101
YEATS4
ISG20
HNRNPA2B1
CBX3
H4C15
H4C14
H3C15
H3C14
ZNF335
SRP9
CASC3
TUFT1
RGS19
MCM7
LKAAEAR1
BAX
AP4M1
TSSK4
TACR2
TIPARP
FOXO6
EXOSC5
BCKDHA
ZNF778
TCP11L2
RNF223
TRIM8
SULT1A4
SULT1A3
TMEM52
CALML6
PKD1L3
DHODH
TM4SF1
HNRNPH2
LCN12
LARP1
HDAC4
FBXW5
C8G
SCAMP4
RPSA
PRKCI
FAM178B
ADAT3
GABPB2
MEFV
EIF4A1
CD68
COLEC11
CAP1
H2AC18
ESYT3
RBBP5
MAPK15
MTRNR2L8
ITGB1
SIT1
MAF1
CYC1
CCDC107
ARHGEF39
PPP4R3B
CLN8
TUBA1B
SYNJ2BP-COX16
SYNJ2BP
ILVBL
GALR1
VPS33A
PDXDC1
MAL2
SRA1
SLC35A4
POLR1D
LNX2
KAT7
APBB3
SLX1B
SLX1A
BOLA2B
BOLA2
ZFP91
LPXN
CENPA
ENSA
TCERG1
CLK1
ADK
GFRA3
TUBA1C
ZFYVE28
GREB1
CFAP99
USP48
ZHX2
TMEM53
SYNCRIP
ARMH1
DDX3X
MOCS3
MAX
DPM1
PHF23
DVL2
CTDSP2
SREK1
RAD50
KLHL12
STXBP4
COX11
EMP3
CCDC114
RNF139
RBBP6
YARS1
S100PBP
NAPA
ZBTB7B
LENEP
MMADHC
MZF1
WDR89
YWHAZ
ADGRB1
ZFP1
SLC43A2
PCBP1
DDX59
TBC1D13
SKA2
PRR11
LGI1
SPPL3
VMP1
PTRH2
GNAS
TADA3
ARPC4-TTLL3
ARPC4
AGAP2
SLC39A6
SEPTIN9
IGSF21
CD2BP2
H2AC19
PTPRN2
ATIC
XRN2
THRAP3
SLC25A24
RLF
L3HYPDH
JKAMP
CYB561
RPS29
PIM3
EIF4G1
SCAF1
RRAS
PPM1A
CIPC
PLA2G1B
INO80
EIF5
TMCC1
SLC25A11
RNF167
PFN1
FBXO46
PPP1R13L
POLR1G
HEXIM2
GP1BA
EIF4A2
DLX4
ECH1
SPATA2
PRC1
PEX14
DFFA
CALM2
ZNF84
FBXO5
LUC7L2
PDP2
STAM2
RNMT
FAM210A
COPS7A
TJP2
BOLA2-SMG1P6
STMN1
BCL6
STOML2
PIGO
NDUFS6
MRPL36
MLH1
EPM2AIP1
HES1
KPNA2
TBC1D15
TSTD2
NCBP1
SGO1
ATP6V0C
AMDHD2
UBR5
SMARCD2
ARID3A
PCBP3
ZNF219
TMEM253
PDCD6IP
CDK19
AMD1
PTP4A1
MIOX
ADM2
SPAG9
ASPH
GART
DDX43
PPIA
GLS
STX6
HACL1
BTD
BCAS1
NSUN3
DHFR2
PRKDC
MCM4
GPBP1
FAM53C
CDC25C
COX19
TMEM129
TACC3
SLBP
TRMT112
PRDX5
PACSIN3
NPM1
USP9X
TRIM59
CSRNP1
ATOH8
ANAPC7
SLC25A19
PIGW
MYO19
GGNBP2
EIF3E
TATDN2
TARDBP
HIRIP3
UBQLN1
HNRNPA1
CBX5
SLC35F6
CHKA
KLF10
RBM3
PPP2R5C
PABPC1
ZFP62
MTDH
FBXL18
RNFT1
NEMP1
PSME3
BECN1
MED26
RTN4RL1
DPH1
NAMPT
FCGR3A
AEN
JUNB
FBXO33
TUBGCP5
FBXW4
DNAJB1
PAK1IP1
MAP11
LAMTOR4
C6orf52
TRA2A
ADGRE5
OSGIN2
TMEM88
NAA38
HNRNPC
CYB5D1
ATF7-NPFF
ATF7
SLC25A10
MRPL12
SV2A
RIPK2
UQCRC2
ALDOA
TEDC1
PCNT
CRIP1
C21orf58
AP1G1
GPRC5A
SLC25A17
KDM2A
SIRT4
CACYBP
PPP1R15B
THRA
PRMT2
PHB2
PLXDC1
MCCC1
IREB2
DDX23
PCIF1
STX16
LY6L
ERGIC2
DEF6
DNAJA3
CORO7-PAM16
CORO7
LRCH4
FBXO24
CYTH2
SARAF
GCLC
TMED10
DCBLD1
ZNF217
CCDC86
TFAP4
POLR2J3
WDR6
PES1
SHISA5
GATAD2A
ARL4A
LAMTOR1
FCMR
ANAPC15
ZNF384
WDR74
STX5
MTRNR2L2
MSH3
DHFR
FAF1
CDKN2C
MYL6B
MYL6
U2AF2
CCDC106
TRAF3IP3
PARP10
MUC3A
GRINA
BCL9L
HS3ST3B1
UBALD1
MGRN1
SPTSSB
LTV1
SMG9
SERINC3
PMVK
PKIG
PGP
MLST8
E4F1
BRICD5
RNF31
PSME2
FAF2
EMC9
ARF6
SLC12A4
HSPH1
SETDB1
PHF12
HSF1
BOP1
DUSP1
GSTT2B
GSTT2
DDT
PPP1R15A
PLEKHA4
SLC35B1
MBNL1
GOLIM4
OGFOD2
ARL6IP4
ABCB9
TSEN54
TANC2
LLGL2
DARS1
CASKIN2
TRA2B
TOP3A
SMCR8
TFAP2C
KIFC1
FLNA
EMD
TAGLN2
TEX14
RAD51C
PSMC5
FTSJ3
CRIP2
KHSRP
STK35
MUC20
CHMP3
USP17L22
USP17L21
USP17L20
USP17L12
GMNN
CA5A
BANP
TMEM114
HNRNPD
RAB24
PRELID1
MXD3
MLLT11
AHI1
TREX1
SLC5A6
MICU1
CAD
ATRAID
TIPIN
KIAA0895
DNAJB5
ANLN
SPATA3
TDRD1
PIK3R3
CCDC186
RITA1
PRKAG2
OSBPL1A
DDX54
KPNA3
SRSF4
RRP9
PARP3
CCDC6
YIF1A
TMEM151A
SPATA17
NOP58
HNRNPH1
GPATCH2
EHMT1
ARRDC1
PRSS33
METTL23
MEF2D
JMJD6
ELOB
APH1A
TIMM44
KCNA2
ZNF24
SOCS5
PNISR
PRR22
DUS3L
ZNHIT1
PLOD3