ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457296 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◣ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CIART
C1orf54
VAMP2
PER1
AP5S1
CRY2
DBP
CA11
DUX4
AGAP11
ADIRF
PER2
CRY1
OLFML2A
NR6A1
PFDN4
TEF
RORC
C2CD4D
NR1D1
BCAS3
TRAPPC6A
BLOC1S3
CLUAP1
C16orf90
SNRPE
FZD1
RIPOR3
RNASEH2C
KAT5
GSN
BHLHE40
PNP
PIP4P1
OSGEP
APEX1
IGFBP4
PLEKHF2
PMEPA1
CD22
NPTN
YPEL5
LNX1
PLD6
MAP1LC3B
FBXO31
FRG2C
TXNIP
OSGIN1
SLCO4A1
RALGDS
GET4
PTBP1
ART1
CTDSP2
SLC20A1
IGSF8
PDXDC1
NOL8
CENPP
RNF43
SLC22A5
EIF5A2
TSPAN31
MARCHF9
CDK4
FAM76A
SPATC1
TRPV4
LRRC56
HRAS
TRIM37
BAHCC1
CLN6
MAPK6
CDIPT
MYL12A
PHRF1
P2RX2
LRCOL1
BCAR1
DOCK6
SLC25A36
ZFP36
PLEKHG2
PPM1D
CEP63
ANAPC13
ZMYND8
CTDSP1
MAPKAPK3
CISH
TXNRD1
SETD1B
RHOF
EPB41
RFESD
PMS2
AIMP2
MICALL2
CTTN
BMP7
TNRC18
LOC100129484
TEKT3
NPR3
FOXJ2
UBE2B
CDKL3
HOOK2
CEBPB
UTP18
MBTD1
PTCD3
POLR1A
UVRAG
ARRDC4
CCDC24
LYN
PRSS16
TBX2
BCAS4
GTF2A1
PNPLA7
MRPL41
CSTF1
AURKA
POLG2
DDX5
AVPI1
ANKRD12
USP32
DPP3
BCAS1
BRI3
SMIM6
SMIM5
NUDCD3
PRKCI
MOCS3
DPM1
TMEM116
ERP29
NEMF
PLEKHM3
PLEKHG5
SENP8
MYO9A
TADA3
ARPC4-TTLL3
ARPC4
GSTP1
LYRM9
FAM117B
SLC35E2B
CSDE1
TUFT1
DISP3
TMEM94
MAP2K7
TNNI3
DNAAF3
SRP54
TIPARP
PNO1
DBNL
DDX42
CCDC47
CMC2
CENPN
STX4
TMEM265
PHKG2
RNFT1
GNB2
PPP1R13L
POLR1G
TOR2A
NAA80
IFRD2
HYAL3
GPD1
COX14
FAM53C
CDC25C
PRLH
FLCN
IGFL4
GMFB
TEX14
RAD51C
LOC102724770
DGCR6
FRG2
SLC2A4RG
LIME1
BCL6
SLC35E2A
SGK3
DCLRE1B
AP4B1
BRIP1
LPCAT1
PC
LRPPRC
EIF3B
RNASEK
C17orf49
SMIM41
ATG101
EED
PRORP
PPP2R3C
TMEM260
TPTEP2-CSNK1E
HIF1A
VMP1
PTRH2
ISOC2
TIMM22
PTEN
KLLN
RRP36
MEA1
KLHDC3
NXT1
GZF1
PIK3IP1
MADD
GOLM1
RAD9A
PPP1CA
TBC1D17
PNKP
AKT1S1
PARD6B
NBPF1
TMEM231
GABARAPL2
GIPR
EAPP
HSPH1
KLK13
UQCRC2
GRHL2
RCCD1
ARID3B
MVB12A
TM4SF1
BCAM
RBBP5
SHKBP1
MRPS23
NTSR2
GREB1
ELAVL3
EMC2
KCNA2
NME1-NME2
NME1
RTEL1
DACT3
TRIB1
HCN2
SPTBN4
BLVRB
H4C4
H2BC6
MBNL1
CRYAA2
CRYAA
EIF4A1
CD68
SPATA17
GPATCH2
PAK1IP1
C6orf52
GPRASP1
RHBDD3
EWSR1
PDE4DIP
PPP1R3C
ESYT3
SPAG9
VGF
AP1S1
C6orf62
RHOD
SELENOW
PSMD6
CHFR
NOCT
APPBP2
PDE12
TRAPPC9
STX16
MTMR14
RPEL1
TATDN2
SSBP2
TUBD1
RPS6KB1
TENT5B
RNF223
PRMT1
HBP1
ZNF778
SLC25A19
TMEM205
RAB3D
CCDC159
UNC13D
MEFV
RIN1
TRMT12
ELF3
CD55
TCERG1
POLG
KHSRP
CLTC
EIF3E
SLC12A4
ZBTB37
SRA1
SLC35A4
APBB3
CCT5
ATPSCKMT
CENPA
KDM2A
NCOA3
FAF1
CDKN2C
GPRC5A
ARFGEF2
GTPBP6
TMEM53
ARMH1
ATF7-NPFF
ATF7
S100A11
STK35
ILF3
HES4
HPS5
GTF2H1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
FNIP1
ZNRF2
C3orf14
VPS11
ALDOA
FAM214B
ZHX2
CD302
SSBP1
GPR37L1
AMHR2
ZNF687
MAN2A1
NUDT4B
PPP1R32
HEG1
PARP16
ATP2A3
TRIP6
SRRT
RNF13
KMT5A
RMND5B
SPIRE2
NBPF4
EXOSC5
BCKDHA
WDR62
THAP8
SPG7
MCCC1
STARD10
SIDT1
NR1H3
ACP2
KHDRBS1
NRAS
CYP27C1
SLC35A5
ATG3
RPS19
HSF2
UMODL1
SLC49A4
HSPBAP1
UBE2H
NPM1
SLC35B1
SLC34A3
RNF224
RNF208
CYSRT1
RBBP6
KDM6B
RPS29
PRKAG2
DHX40
SKA2
PRR11
ACVR2B
RBBP8NL
PES1
EHMT1
ARRDC1
RSAD1
DGKZ
WDR74
STX5
ZNF598
BCAS2
NPW
SULF2
SIT1
CCDC107
ARHGEF39
SSBP3
MRPS18B
ATAT1
SIRT4
PDXK
ZFP62
SCAF1
RRAS
UBAP2L
C1orf43
UBFD1
EARS2
CELSR2
WDPCP
MDH1
COA1
DNAJB5
ZER1
POLD4
PMVK
UCKL1
SYNGAP1
PHF1
CUTA
M6PR
KLRG1
C1orf174
HDGFL3
TSTD2
NCBP1
POLD1
NR1H2
STAM2
MDM4
SURF4
KLHL35
KMT2E
AGFG2
TNS3
PLEC
NQO1
H4C15
H4C14
H3C15
H3C14
H2AC18
H2AC19
KRT8
EPS15L1
KLF6
HOMER2
LAMTOR1
ANAPC15
NKIRAS1
NR1D2
LAMP1
MTRNR2L1
COMMD8
PER3
CEP112
CLCN7
HOXC13
GTF3A
ERCC6L2
LAG3
MTHFR
CLCN6
ZNF292
PPL
VPS26A
AP5Z1
SPG21
DAZAP2
FOSL1
FIBP
CCDC85B
CDK12
ZNF595
WASHC2A
TRAPPC10
S100A13
S100A1
CHTOP
MTHFD1L
SNRPA
C19orf54
DENR
LRATD2
SERINC4
SERF2
HYPK
INAFM1
CAMKK1
TRAPPC2L
GALNS
COL23A1
MRPL40
HIRA
G3BP1
SLC35B2
HSP90AB1
SLC33A1
SLC25A13
RPUSD4
FAM118B
MED1
WASHC2C
ZNF331
CREBRF
MORF4L1
ALG13
PRDX6
SPHK2
NFKBIE
SPNS1
LAT
EPC1
MAPK1IP1L
TMEM185B
B3GNTL1
CPEB1
PRKAR1A
SDR39U1
ZNF438
USP8
SRSF1
LSM12
G6PC3
ZNF263
RRAGC
MAMDC2
TRMO
SNAPC1
RGS20
ATP6V1H
TRIQK
ADNP2
NFX1
XPOT
COQ10B
HMGB2
GYG1
GSK3B
TOB1
HERC3
TKTL1
TEX28
SRSF5
MAP4K1
EIF3K
THOC7
ATXN7
PRPF3
ATXN2
TTYH1
TMEM18
USP36
GBE1
PSMD5
CCDC116
SYCP2
PPP1R3D
IP6K1
FAM217B
KLF1
GCDH
DNASE2
LRFN4
FAM214A
TCF25
TPD52L2
ABHD16B
UBE2Q1
CHRNB2
AFAP1
CCNL1
ARRDC3
SLC25A25
RAB17
ZSWIM1
SPATA25
NEURL2
CTSA
YBX2
GNG14
DHPS
ZNF706
SRCAP
LOC730183
PUM2
NAPRT
MROH6
EPM2A
SNAP29
PI4KA
COL6A2
SCAF11
CLN3
APOBR
SEPTIN2
HDLBP
CYP2W1
RMND1
ARMT1
THAP5
DNAJB9
NTN5
PAF1
THNSL1
SUMF1
KDM4C
KCNIP2
NBN
GGA2
MARCHF8
COL6A1
STAT6
ZC3H4
SBNO2
ATAD3A
EIF1
HNRNPF
NAA50
ATP6V1A
DPH2
B4GALT2
ATP6V0B
RMI1
HNRNPK
BCLAF1
GABARAP
TMEM187
HCFC1
TM9SF1
IPO4
PPAT
PAICS
POLI
RPS11
RPL13A
NPIPB15
HEXA
ZZZ3
RRAGB
SLC25A39
PRR5L
COMMD9
EIF4B
PPFIA4
H4C9
H2BC12
H2AC12
OPRL1
PPP1R35
SPAAR
NTMT1
HRCT1
C9orf50
TBCEL-TECTA
TBCEL
MTCH2
CNOT3
NFYC
CNNM2
UCP2
ARIH1
CFAP251
CHMP2B
EPB41L4B
CD164
MAN2B2
MED13
SLC35C2
RFX3
SETD1A
ORAI3
UNK
H3-3B
ZCWPW1
MEPCE
LFNG
SLC25A26
RIMBP2
EFR3B
NOP14
GRK4
BTNL9
BRPF1
WTAP
SOD2
TMEM141
FNBP4
CCDC183
SLC3A2
DGAT2
SNX5
MGME1
NAIF1
LAMC1
ERCC1
YEATS4
ISG20
HNRNPA2B1
CBX3
ZNF335
SRP9
CASC3
RGS19
MCM7
LKAAEAR1
BAX
AP4M1
TSSK4
TACR2
FOXO6
TCP11L2
KLF11
TRIM8
TMEM52
CALML6
PKD1L3
DHODH
HNRNPH2
LCN12
LARP1
HDAC4
FBXW5
C8G
SCAMP4
RPSA
FAM178B
ADAT3
GABPB2
COLEC11
CAP1
MAPK15
MTRNR2L8
ITGB1
MAF1
CYC1
PPP4R3B
CLN8
TUBA1B
SYNJ2BP-COX16
SYNJ2BP
ILVBL
GALR1
VPS33A
MAL2
POLR1D
LNX2
KAT7
ZFP91
LPXN
ENSA
CLK1
ADK
GFRA3
TUBA1C
ZFYVE28
CFAP99
USP48
SYNCRIP
DDX3X
MAX
PHF23
DVL2
SREK1
RAD50
KLHL12
STXBP4
COX11
EMP3
CCDC114
RNF139
YARS1
S100PBP
NAPA
ZBTB7B
LENEP
MMADHC
MZF1
WDR89
YWHAZ
ADGRB1
ZFP1
SLC43A2
PCBP1
DDX59
TBC1D13
LGI1
SPPL3
GNAS
AGAP2
SLC39A6
SEPTIN9
IGSF21
CD2BP2
PTPRN2
ATIC
XRN2
THRAP3
SLC25A24
RLF
L3HYPDH
JKAMP
CYB561
PIM3
EIF4G1
PPM1A
CIPC
PLA2G1B
INO80
EIF5
TMCC1
SLC25A11
RNF167
PFN1
FBXO46
HEXIM2
GP1BA
EIF4A2
DLX4
ECH1
SPATA2
PRC1
PEX14
DFFA
CALM2
ZNF84
FBXO5
LUC7L2
PDP2
RNMT
FAM210A
COPS7A
TJP2
STMN1
STOML2
PIGO
NDUFS6
MRPL36
MLH1
EPM2AIP1
HES1
KPNA2
TBC1D15
SGO1
ATP6V0C
AMDHD2
UBR5
SMARCD2
ARID3A
PCBP3
ZNF219
TMEM253
PDCD6IP
CDK19
AMD1
PTP4A1
MIOX
ADM2
ASPH
GART
DDX43
PPIA
GLS
STX6
HACL1
BTD
NSUN3
DHFR2
PRKDC
MCM4
GPBP1
COX19
TMEM129
TACC3
SLBP
TRMT112
PRDX5
PACSIN3
USP9X
TRIM59
CSRNP1
ATOH8
ANAPC7
PIGW
MYO19
GGNBP2
TARDBP
HIRIP3
UBQLN1
HNRNPA1
CBX5
SLC35F6
CHKA
KLF10
RBM3
PPP2R5C
PABPC1
MTDH
FBXL18
NEMP1
PSME3
BECN1
MED26
RTN4RL1
DPH1
NAMPT
FCGR3A
AEN
JUNB
FBXO33
TUBGCP5
FBXW4
DNAJB1
MAP11
LAMTOR4
TRA2A
ADGRE5
OSGIN2
TMEM88
NAA38
HNRNPC
CYB5D1
SLC25A10
MRPL12
SV2A
RIPK2
TEDC1
PCNT
CRIP1
C21orf58
AP1G1
SLC25A17
CACYBP
PPP1R15B
THRA
PRMT2
PHB2
PLXDC1
IREB2
DDX23
PCIF1
LY6L
ERGIC2
DEF6
DNAJA3
CORO7-PAM16
CORO7
LRCH4
FBXO24
CYTH2
SARAF
GCLC
TMED10
DCBLD1
ZNF217
CCDC86
TFAP4
POLR2J3
WDR6
SHISA5
GATAD2A
ARL4A
FCMR
ZNF384
MTRNR2L2
MSH3
DHFR