ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478136 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◣ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
MTRNR2L2
ATL3
MTRNR2L8
HTR5A
XKR7
IQSEC3
ZCCHC7
DHX40
GAGE2C
GAGE2B
GAGE2A
CPLX2
RNF130
DNAJC11
SRSF10
H4C11
L1CAM
NUP214
N6AMT1
USP14
SRSF7
YPEL1
TMEM168
NUF2
GLRA1
MED15
MRPL40
HIRA
MKLN1
MAPK1
CELSR3
EPHA10
TCAIM
BARHL1
ATG10
RFC1
ZSCAN30
NBPF1
POLR2J3
TMEM217
TBC1D22B
ICE2
ZNF280D
RPL31
TTC26
HES3
TRIM44
H2BC11
H2AC11
PRMT2
FH
ZNF74
CETN3
RPA2
ING3
SNAP25
FAM172A
RPAP2
GLMN
TLR5
MRPS33
H4C12
CAPN7
COX18
MTR
H4C9
MPZL3
PEX3
ADAT2
MRPL17
EIF2D
SPATC1L
HPCA
UFD1
CDC45
TMEM209
SCG3
TCTE3
ERMARD
TMEM191B
GMNN
DIABLO
LRRC8B
GNAI3
OXR1
RAB36
SESN1
CHGB
PGBD2
AGBL3
XPC
LSM3
PNPT1
BAG6
THOC3
UBE4A
LUC7L2
DCAF8
DNAJC6
C1orf53
ANKRD36B
CBLL1
FRA10AC1
CZIB
ZCCHC9
MTPN
LUZP6
EIF5A2
RPP25
AIP
NDC80
METTL4
TSEN15
LZTR1
FMC1-LUC7L2
CCT5
ATPSCKMT
E2F6
UBE2L3
GLB1L2
CERS6
SULT6B1
CEBPZOS
PSMG1
UGDH
HNRNPH1
FUS
CRKL
KAT7
HMGB2
MAN1A2
DOP1A
PRMT3
MRS2
MGA
DUS4L-BCAP29
DUS4L
COG5
EXOSC9
H4C15
H4C14
ENOSF1
CHD1
KDM7A
RPL5
ITPRID2
MRPS30
CKAP2L
HLCS
SFPQ
ATP5MC2
RSPH3
CLCC1
THAP6
LRRC8D
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ZNF398
ZNF425
COA7
TMED1
RPS3A
H2BC12
H2AC12
MCCC1
C22orf39
STX16
ZSCAN31
DCAF10
DNAJC9
MVK
ADO
ZKSCAN8
KTI12
RTL10
GNB1L
ADSS2
ABCA3
THAP7
TRMO
CYB5R4
ANXA7
SLC25A32
DCAF13
MTHFS
TMEM191C
DSE
TSPYL1
SSBP1
COMMD8
SLC25A36
FBXO4
UAP1
GLE1
LRRFIP2
MAPK8
BET1
MST1
FOXJ3
MMADHC
MYL12A
PTP4A2
FBXW2
ORC4
MBD5
ASAH2B
RNF32
CEP295
RBKS
BABAM2
EBNA1BP2
CFAP57
STMP1
ASCC3
CCDC34
TBXAS1
HIPK2
RBM7
C11orf71
RBM28
SETD9
CCDC66
SMARCA5
ACBD6
SRSF4
FIGNL1
ATP5MC3
AMACR
CCT2
THUMPD1
EXOG
UGGT1
XKR9
LACTB2
ERBIN
WASHC4
CEP192
PHOSPHO2
CCDC173
USP17L22
USP17L20
WASHC2C
SEC31A
THAP9
CREB3L2
IFNAR1
ZNF566
PCNA
KMT2E
BLOC1S5
SUMF1
NUB1
INTS12
GSTCD
CYRIB
TRA2B
ZNF23
VAMP4
TANK
RDH14
ZCWPW2
AZI2
PRMT6
PSMD5
NFYC
NAT10
RAPGEF6
UQCRC1
GNL2
MED30
PKD2L2
KANSL1
CENPE
C16orf46
FAM185A
GTF3C4
DDX31
TMEM230
TM2D1
PMVK
BBS5
KLHL8
FBXO30
XPR1
TES
DHDDS
PIK3R3
PTRHD1
CENPO
CCNA2
ZNF596
FBXL13
ARMC10
ZNF280A
ZNF614
ZBTB8OS
RBBP4
P4HA1
PCYT1A
MYNN
PRDX6
DNAJC10
NDFIP1
CEP43
CNOT4
PWP1
SLC35F5
ZNF184
PHC2
NADK2
BRIP1
EID1
CHORDC1
H2BC18
PDSS2
CCDC71L
H3C13
ELAPOR2
POU2F1
CDC5L
CUL5
PRAME
ATXN7L1
PNRC2
RPS15A
ARRDC3
MTF2
SVIP
SRSF2
MFSD11
OGDHL
FAM3C
SMIM15
TUBE1
FAM229B
XRCC2
EID2
FAM133B
ABRAXAS1
TNPO3
MSH5
AGPS
RGS2
NUDC
PPP3CB
AASDH
PIGF
CRIPT
USP47
GTF2H2C_2
GTF2H2
FAM98B
CITED2
WDR3
GDAP2
SDF2L1
PDCD6IP
RPS20
CD55
PYURF
PIGY
HERC3
LARP4
MORN2
DHX57
OPN3
CHML
ST7
MIGA1
KLHL36
NDUFA8
MORN5
OCIAD1
SLC16A1
VPS29
RAD9B
HOMER1
TEX10
CHCHD3
RFESD
RAB5A
EFHB
SPTLC1
SDCBP
AHI1
RBM45
PPIL2
LCLAT1
RWDD2A
PGM3
TOLLIP
MED23
OXNAD1
DPH3
TRNT1
TMEM50B
MFN1
SLC35B4
TBRG4
RBL2
COMMD3-BMI1
COMMD3
MTMR2
EXPH5
TMEM106B
HBQ1
WASL
EEA1
C5orf51
HBP1
RARS2
ORC3
CCNL1
GFPT1
MEPCE
ZCWPW1
TIMM17A
RRS1
CDC42BPA
ERRFI1
SAYSD1
TTC30A
SNAP29
PI4KA
REXO2
LAMP1
SRSF1
TOR1AIP1
THOC1
NDUFB2
PRRC2C
KLHL7
GINS4
TARS3
TMEM19
TOMM5
KCNK12
MARCHF4
C7orf25
DTWD2
CALB1
ZNF780B
OR4F4
RAD23B
MKRN2
TMEM248
CDK11A
MFSD1
DGCR6L
TASOR
ZNF786
SLC35A1
MAPK14
CEP350
IPO9
TBC1D7-LOC100130357
TBC1D7
TRMT11
HDAC2
SERP1
EIF2A
SRFBP1
KIF2A
PSMA1
TFAM
LYSMD3
TMED5
CCDC18
CD164
RINT1
ZNF669
CNTRL
CEP135
C5
SH3BGR
LCA5L
ACTL6B
RWDD3
PDE3B
WHRN
NRF1
LRRC42
HSPB11
DDX21
PSMD7
ADK
DYNC1I2
CDKN2C
MED13
MRPS36
CACYBP
MAP3K7
MRPL21
IGHMBP2
SUCO
SLC9B2
QTRT1
MUL1
DTD2
KIAA1958
ZNF326
DPP8
C9orf147
NBN
SPG21
SECISBP2L
MARCHF6
HSPA5
ZNRF2
BAG2
LRIG2
TTF2
P2RX6
DSG2
PDXDC1
INKA2
DDX20
ELP1
ABITRAM
LYPLAL1
KLHL12
SERBP1
SMIM12
DDX59
PPIH
PMPCB
BCAP29
ORC2
TTC30B
TCAF1
LDHA
UTP11
CTNNB1
PTCD2
MRPS27
ORC5
OSTC
EGLN1
TP53I3
HADH
RAB18
FMC1
MARCHF7
IPO11
DLD
HERC4
ACYP2
LUC7L
JMJD1C
REEP3
GOSR2
DNAH14
TIPRL
ANKRD36
STEAP1B
NABP1
SERPINI1
PDCD10
CCDC91
STT3B
H3C2
COQ10A
JAGN1
LOC389831
SOD2
TAF7
KIAA0895
TMEM268
SKP1
SLC25A24
EHD4
AP3M1
MANBA
TMEM121B
UBE2D3
KLHL20
STK25
RAB10
ATR
TAF9
RAD17
AK6
ATP2A2
FAM200A
DIPK2A
TRMT10A
MTTP
ITPR1
EPS15
IMMP1L
ELP4
ZHX1-C8orf76
ZHX1
DYRK1A
CYP4F11
TATDN3
NSL1
DTX2
LRRC58
EDEM2
SBDS
OTUD6B
KCTD2
ATP5PD
H2AX
POC5
ABCC5
SCLT1
C4orf33
BSDC1
KIF23
CNIH4
MSANTD4
PLBD2
HEY2
ZKSCAN3
TRPC1
KHDRBS1
DHX9
NOL7
TRIP4
RAD50
LSM8
ROPN1L
HECA
ATP5F1E
ATAD2
EPM2A
SGO1
PPM1F
RBM33
HSPA1B
SNRNP48
NCKAP1
MEF2C
UBXN2B
PLAG1
EREG
CHCHD7
CCDC59
FARSB
CTPS1
GTF2H2C
CCNH
RAB37
PPIL1
POLR3G
MBLAC2
LHFPL5
AGO3
RNASEH2C
NEK11
ASTE1
ACER3
PPP2CA
RPS6
SHPRH
THNSL1
SELENOH
PEF1
METTL5
BBS1
TRIM24
NUTM2E
SGK3
PGM2
RRM2
TMEM126B
DLG2
FAM149B1
ECD
TAB2
PPP1R2
IQCH
AAGAB
ANAPC10
ABCE1
AFF4
SLC44A1
TSTD2
NCBP1
UBP1
GLRX2
SMIM26
DMTF1
C12orf29
FIG4
AK9
ERMP1
YES1
GPC5
HNRNPH3
PBLD
SNRPC
DDX42
CCDC47
PITHD1
NCOA5
UBE2Q1
ZNF800
VTA1
NMBR
PPP1R15B
EZH2
RAP2A
COPB1
ZNF215
STRIP2
GARS1
DDX18
PTDSS1
MTERF3
LSM2
PRPF38B
TUT4
ZNF529
H2BC15
H2AC15
C8orf88
RHOBTB1
HINFP
SRP19
APC
PPP1R12A
TTC14
USP30
ASXL2
CMTR2
YWHAG
HSD17B4
NDUFA4
IVNS1ABP
SCRN3
CIR1
USP25
FAM241A
VPS26A
TBC1D31
IRAK2
UTP25
CBWD5
UBN2
H2AC19
H2AC18
CDC27
TCP1
CDC73
MRPL18
AKIRIN2
PDCD2
CRBN
ATF3
SMCHD1
NUDT3
PSRC1
TXNRD1
SLC39A8
BBS7
BPHL
TBX1
MANEAL
NCAPG
CBWD3
CBWD6
ZSWIM7
TTC19
UBE2K
PSMG4
URB2
TAF5L
TARBP1
LRRC37A3
SARAF
TFB1M
LRIF1
CEP162
DDX19B
DMXL2
HMGCR
SRPK2
PHF10
RSRP1
ERCC6
FAM227B
DTWD1
RICTOR
TDG
SPG11
ANKRD36C
GDAP1
MFAP3
FAM114A2
MARCHF8
TMTC3
CEP290
NET1
AKAP9
ZNF621
TMOD3
LRRC61
ACTR3C
DCP1B
IL18R1
MARCHF3
THAP5
DNAJB9
TMCO1
AGL
ABT1
SLC25A28
DR1
ZNF391
SETD4
HACL1
BTD
FMNL3
NUP35
MRPL42
ZNF484
EPC1
CRTAP
MTDH
HINT1
ATF2
CD2AP
CCNI
HEATR3
TTC37
ARSK
C15orf61
SECISBP2
INTS2
MAT2A
GOLGA4
USP9X
RNF7
UMPS
YBX1
ZNF292
CSTF3
HACE1
CLTCL1
HCFC2
GLT8D2
COMT
TMEM87B
STX11
CKLF-CMTM1
CKLF
TDP2
ACOT13
TBC1D5
LTV1
FIP1L1
C8orf37
POLR1F
RUVBL1
HEATR5B
GPATCH11
TRUB2
COQ4
USP53
C4orf3
SMN2
SMN1
NXF1
DDX5
MYL12B
ESYT2
CYP2R1
EEFSEC
NUP205
AIG1
C12orf45
SLC25A38
HFM1
CKMT1A
ANGEL2
PMS1
ORMDL1
FAM228B
HSPA9
CLTC
RPLP1
ZNF200
RTF2
SDHD
TAMM41
H2BC21
H2AC20
H4C5
PPP2R5A
PHF19
PNP
MAP4
RNPEP
RPP21
PRKRA
PJVK
COG7
AP1AR
H2AC21
NR3C1
ETNK1
DNAH7
RSPH14
PFN4
LOC100287896
LIPT2
KPNA2
RPL37
UTP15
ANKRA2
CHFR
DHX16
LEMD3
AGGF1
STAM2
PTS
XYLB
GINS1
THUMPD2
CDKN2AIP
USP45
ALG6
MMS22L
ZBTB37
NT5C3A
YARS1
S100PBP
BNIP1
HINT3
PGBD4
EMC7
EXO1
VPS50
HEPACAM2
RNF187
CCDC83
HNRNPR
FER
AP3B2
HPS3
HMGCL
TTC17
SLC37A3
OR2L13
SH3BGRL2
KAT2B
H2AC4
CHMP7
MAD2L1
TARDBP
HPS5
GTF2H1
WASHC2A
NKIRAS1
RNF145
SERF1B
SERF1A
RPL15
RPL22
DPY19L3
WDR48
SCN11A
CCDC146
OSBPL8
PYCR2
YTHDF3
UBE2J1
KIF5B
CUX1
DARS1
SIRT5
CYCS
ASPH
ESCO1
TDRD7
GGH
TRIM23
TRAPPC13
SHLD3
MRTO4
EMC1
TUBA1B
ZNF891
ZNF10
FBXL5
TTC3
PIGP
SCFD2
CAMSAP2
PSMD12
UBOX5