ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025676 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◣ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
PEMT
MTRNR2L2
MTRNR2L8
NME1-NME2
NME1
BAX
NME2
CCDC86
MLLT1
SLC35E2A
NOC4L
DDX51
SLC35E2B
TRIAP1
ZNF485
SNRPD1
FAM98A
COLEC11
SSNA1
ANAPC2
SNX25
CFAP97
AKAP10
PHF7
BAP1
DRG2
RGPD2
RGPD1
MRPL55
DDX42
CCDC47
GEMIN7
P3H4
FKBP10
GTF3C4
DDX31
TBL1XR1
EIF5A
FAF1
TMEM248
SRSF1
DHX33
MARVELD1
PCBP1
IARS1
ZFP36L2
TENT4A
NPM1
MTHFD1L
SGTA
CWC25
UBE2K
G6PC3
SNRPE
RAN
TET3
DUS2
DDX28
RAD50
NOC3L
RBM42
ZNF639
EIF3B
HMGA1
CLUAP1
MED9
MRPL3
SLC25A10
GCN1
CAD
SELENOO
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DIAPH1
KCNQ5
SYNCRIP
COPS3
PIGL
MDN1
NCBP2AS2
NCBP2
ZSWIM7
TTC19
MAPKAPK5
SPRED1
CLCN7
EBNA1BP2
CFAP57
NOP16
HIGD2A
PTDSS2
ICE2
UTP4
DERPC
CHTF8
SMYD2
UBFD1
EARS2
SNF8
CENPV
DR1
C16orf91
ABT1
MAST2
LARP1
DPH5
PDCD11
ATP5MD
USP22
USP32
RBM18
MRRF
DUS3L
ETF1
HNRNPF
GET4
ARSG
PARP1
FRA10AC1
ZBTB44
KMT5B
CNBP
EEF2K
POGK
RCC2
MEF2D
ADORA2B
PWP1
PMS2
AIMP2
RNF166
CTU2
GPSM3
KLF16
SECISBP2
THNSL1
PSMB6
CBWD5
CBWD3
PDS5A
FNTA
TBRG4
COA8
BAG5
CMSS1
SCAND1
NR1D1
RRM1
CTU1
RPL18A
PLD6
PBRM1
GNL3
LONP1
CATSPERD
CELSR3
LRP6
EPRS1
ATL3
XPO5
POLH
TAF5
OSGIN1
WDR4
PPRC1
GTF2H3
EIF2B1
ELP3
RPL10A
NUP50
PRKAR1B
TRAP1
SAMM50
ADPGK
HAX1
CUTC
COX15
EIF4H
TOMM34
DIMT1
YARS1
S100PBP
EIF4B
RRP1B
HSF2BP
ASAP1
HNRNPL
LRRC58
GLRX2
PFAS
NCOA5
MRPS17
CLINT1
HTATSF1
COX10
TMEM38A
SMIM7
SLCO4A1
TRMU
WDR3
GDAP2
GATAD2A
SP3
DCP1A
MTG1
DOHH
TRIM16L
PKN2
UTP18
MBTD1
SPRTN
EXOC8
PHF12
SRSF10
N6AMT1
DNAJA3
ANKRD26
RAB35
CCDC12
ADI1
SUGP2
ARMC6
LUC7L2
SMARCA4
VDAC3
XRCC5
MLST8
POU2F1
STK32C
LRRC27
C10orf88
FAM222B
BANP
PDRG1
TUBD1
RPS6KB1
FAM220A
PAGR1
KHDRBS1
PRMT2
ENTPD6
POLA2
SDHA
CCDC127
CXorf38
RAD21
RANBP3
ACTN4
BNIP3
SNAP47
JMJD4
FAM122A
SAYSD1
NBPF1
VPS26B
NCAPD3
ZC3H8
FAM200B
SYNGR4
TOLLIP
MCRS1
CENPBD1
PTPN4
NPRL3
PPP6R1
ATP6V0E2
SAMHD1
MAP2K2
THAP7
RPP38
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
INTS13
FGFR1OP2
RABIF
LAMP1
DDRGK1
FAM24B
MAN1B1
ABCA3
HNRNPH1
CHMP7
C1orf74
FMC1-LUC7L2
MRPL54
MRPS18C
HELQ
CKLF-CMTM1
CKLF
SPPL2B
LSM7
MTHFSD
CBX5
RAB18
EID2B
MYPOP
ZNF12
WIPI2
HNRNPA1
FMC1
FAM71E1
EMC10
PREB
NAGK
TMEM250
NDEL1
MIS18A
IFNAR1
TMEM209
NANP
XRCC2
SH3YL1
ACP1
HNRNPH3
RRP1
SMIM11B
SMIM11A
HASPIN
ALKBH5
LOC100287896
LIPT2
SLC2A11
SUMF2
DENR
KDM8
TRIM37
AKAP1
PBLD
PITPNB
CRTC1
PATL1
ERCC6L2
RCBTB2
SOD2
PPP1CB
PPP2R3B
NOB1
MAP2K7
CDC7
PPP2CA
YEATS4
FADD
CDC5L
TMED4
DCAF8
MOK
SELENOI
ADGRF3
SLX4
MRPL45
STYXL1
NELFCD
CACYBP
LOC100289561
CCNT2
SPDL1
HINT1
STXBP4
COX11
TMEM141
SLC25A11
RNF167
SEC22C
PTK2
RPL36
CHD1
SKA3
MRPL57
OPA1
ZNF576
IRGQ
SAFB2
SAFB
OARD1
NFYA
SLC39A7
RXRB
NOP14
GRK4
MTCH2
USP21
MARCHF7
LOC730183
BTBD10
TIPIN
SRCAP
PUF60
RBM17
TRMO
ASNSD1
ASDURF
TXNL1
RTL10
GNB1L
SNRNP70
ZZZ3
TMEM18
POLR2J3
NPAS4
EIF2D
FUT8
RPL12
LRSAM1
FAM120B
NUP107
SMG9
COPB2
VPS13A
TRMT61B
RSRP1
AMZ2
TUBGCP5
NUP214
XPC
LSM3
ZNF583
CCT5
ATPSCKMT
TAS1R1
NOL9
PRDX1
COQ9
CIAPIN1
HP1BP3
RPS19
DCAF6
MRPL24
MAD1L1
MSL2
NCAPG
SPOP
RALGAPB
DHDDS
QRICH1
TOMM20
RAD23A
PPP4R3B
MPC2
GMCL1
NCOA4
ANKFY1
CDK12
CCNC
TOR1AIP1
RPS11
ARF3
OSCAR
NDUFA3
CCT8
RPS7
C5orf24
RPS6
TDP2
ACOT13
GRB2
C6orf89
SMG5
THOC3
SLC15A4
SCAMP5
NAA35
THAP5
DNAJB9
MAGOHB
TAOK1
TBC1D5
DPF2
EEF1AKMT1
PARK7
ECHS1
ASXL1
PSMD5
POP7
TMCO1
FBXO31
UHRF2
SARS1
SUPT5H
JOSD2
GPAM
CCNQ
SRRM1
INTS7
DTL
CASP2
ERGIC2
CRB1
DYNC2I1
WDR73
ZFP91
GPBP1
TAX1BP3
EMC6
APBA3
COASY
NOL11
PPME1
C2CD3
AKAP11
POM121
HAUS5
BLOC1S4
MAPK14
ACAT2
GDF5
CEP250
TTC32
CAPZA2
AP3B1
GPATCH3
RPL17-C18orf32
RPL17
SMIM14
MAK16
RFC5
ARFGAP3
COP1
CAND1
RPS28
NDUFA7
TBL3
LTV1
RBAK-RBAKDN
RBAK
ZNF286A
AURKAIP1
CHAF1A
SMIM27
NAPG
SNX5
MGME1
TIGD1
EIF4E2
FAM135A
NAA38
CYB5D1
MRS2
PURA
C6orf136
FSIP1
GID8
DIDO1
DNAJC27
ATF2
CISD1
SMIM10L1
PRH1-TAS2R14
GAS8
FBRS
NKTR
NDUFA11
PDXDC1
UBE2D3
DBR1
DARS1
ZBTB2
MAP1LC3B
WDR13
DYRK1B
MRM3
GLOD4
HSPA4
ETFA
CEP350
AHCTF1
VMAC
STRIP1
CFAP70
EHD1
IREB2
RNF149
NDUFA8
MORN5
USP10
CDC34
SHBG
FXR2
MMS22L
XPO7
TTC23
LRRC28
NUF2
PAPSS1
SMARCC1
STS
PUDP
GMPPA
POLDIP3
SCAF11
RAB33B
ZMYM4
LPXN
SIRT5
PALB2
HSF1
DCTN5
BOP1
EPS15L1
C8orf48
EIF4A3
SRD5A1
USO1
TMEM70
PSMB2
HERC1
PRELID3B
MATR3
HINFP
EIF5
UROS
BCCIP
CYCS
ICMT
ZNF638
RSL1D1
MINK1
SHPRH
ZNF664-RFLNA
ZNF664
CCDC92
CC2D1A
C19orf57
WDR18
U2AF2
KIFAP3
TFB2M
CNST
ARPC2
RBM15
SYS1
SRP19
AP2B1
MYL5
ATP5ME
FAM76A
FASTKD2
SUGP1
MAU2
MAP3K7
TMEM104
NAT9
ESRRA
RPL27A
ATAD3A
RPS15
HBS1L
SRRT
CSDE1
SEC62
EFHC1
NFYC
AASDH
DFFB
CEP104
PRKDC
MCM4
TMEM63B
MRPL14
VMP1
PTRH2
TIGD6
HMGXB3
MBTPS1
TMEM43
MICOS10-NBL1
MICOS10
CHCHD4
EID1
WDR43
KIAA1191
GATD3B
GATD3A
HSBP1
SLC25A4
SEPTIN7
RCC1
NUP153
MRPL21
IGHMBP2
TMEM63A
MAPKAP1
MORF4L1
MED1
NUDCD2
HMMR
TIA1
CNP
PRDM4
LANCL2
MRPS7
GGA3
DSN1
CUL3
CCDC93
PUM2
MKNK2
RPL7A
MED22
ADAT1
ZCCHC14
MRNIP
SF1
WRNIP1
GZF1
C15orf40
ATF7-NPFF
ATF7
DHX37
CD2AP
NBPF3
TMX1
ZNF346
CHMP2A
DCTN2
POLR2J
RPL8
ALG8
GOLGA1
RFX1
CDC20
PXMP2
POLE
THAP1
FIP1L1
WDR27
C6orf120
THADA
GLCE
KIN
ATP5F1C
SPAG16
CIAO3
IKZF5
ACADSB
WWOX
DLGAP4
PPM1G
DNTTIP2
POLR2J2
SLC12A2
APTX
ARHGAP35
ZNF317
RBPJ
RPS29
RC3H2
KDM3A
C8orf37
TSEN2
B9D1
SBNO1
YIPF3
POLR1C
UBR3
PIAS4
ING1
GRWD1
MRTFB
CPLANE2
NAT10
WDR77
ATP5PB
PTBP1
RNF130
TGOLN2
ENDOV
USP54
RBM26
SF3A3
LINS1
ASB7
SMG7
ZNF248
CHUK
PCGF1
ZFC3H1
THAP2
AMACR
ATP5MC2
CFAP410
HSPH1
SRSF11
SMARCA5
RNF32
MBD1
CAPN7
STX16
MICU2
UIMC1
RNPC3
E2F6
CD320
CCDC77
AGBL3
NRBF2
CLPTM1L
RAD23B
ZBTB14
TRAPPC2
OFD1
ANKRD13C
IPMK
RPRD2
TSSC4
PGRMC2
EIF2S2
PAXBP1
KIF22
TMEM127
CIAO1
UPF1
NSUN3
DHFR2
DNAJB4
CNOT4
GDI2
PFKFB4
TSACC
CCT3
MTHFD1
NAPB
IMP3
CCNT1
SNRPC
WWP1
CBWD6
ASH2L
DNMT1
SIPA1L1
EXOSC10
XKR7
FANCD2
DHX9
C1orf53
INO80C
ATP5PO
ANO10
ABHD5
IPO11
AGA
MFSD8
LIN7C
ABHD18
ZKSCAN2
POLR2E
NFXL1
ARF4
WDR6
EIF1AD
BANF1
YOD1
INKA2
DDX20
SEH1L
NRF1
TMEM183A
ZNF692
TIGD5
EEF1D
POFUT2
PPA1
IFRD1
RBBP5
ACAD9
TADA3
ARPC4-TTLL3
ARPC4
PFKFB2
TMX3
CCDC102B
PRPF39
APOLD1
DMAP1
C11orf80
FZR1
SPG7
NPTN
ZNF420
EIF2S1
ATP6V1D
ZC3H14
NUP62
IL4I1
ATF5
YIPF2
TIMM29
RELCH
PIGN
POLRMT
DLD
KBTBD6
CCSER2
SPEN
DDX19A
TAB3
SLC30A5
SMARCD2
SLC35B4
IQCC
TMED3
IQSEC3
CENPS-CORT
CENPS
FAM149B1
ECD
SNRPB2
VPS13C
ERICH6
MRPS18B
CSNK1A1
ZNF473
VRK3
ZNF182
SPACA5
HEXIM1
PHF23
DSE
RAPGEF6
RPS15A
PCIF1
UQCR11
KCTD13
GORASP2
ZNF414
UNG
METTL16
ELP6
TMEM109
SAXO1
RRAGA
NOL7
PIGF
CRIPT
PDCL3
ZNF652
NDUFS7
RLF
FITM2
SREBF1
TMEM101
SMC4
IFT80
TSPYL1
THAP12
GVQW3
CBLL1
MED23
CCDC59
PGP
STX1A
PAPOLA
PPIL3
NIF3L1
TRAM1
USP39
ERLIN2
DDHD2
SPAST
CLIP4
MOCS2
ASPH
SPECC1L
CNTROB
AIP
RPS6KB2
EED
KATNIP
GTF3C1
CCNI
ZNF136
CUL5
TBCCD1
BTF3
ZSCAN22
DHX34
CARNMT1
TAOK2
RPL26
PIGW
MYO19
ZNF614
COX18
APC
MYO9B
HAUS8
RFXANK
BORCS8
FUBP1
ERCC6
COX6A1
BRD2
CCNJ
PNN