ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2188684 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◣ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

ADI1
ANKRD26
STK32C
LRRC27
PHF12
SPRTN
EXOC8
CCDC12
RAB35
SMARCA4
SUGP2
ARMC6
N6AMT1
FAM222B
MLST8
ENTPD6
BNIP3
POU2F1
C10orf88
DNAJA3
VPS26B
NCAPD3
XRCC5
EID2B
FAM220A
PRMT2
PAGR1
SAMHD1
ACTN4
ATP6V0E2
SRSF10
NDEL1
CKLF-CMTM1
CKLF
TOLLIP
MCRS1
CBX5
HNRNPA1
KHDRBS1
ZBTB17
GTF3A
LONP1
CATSPERD
MTRNR2L8
RCBTB2
CRTC1
NBPF1
TUBD1
RPS6KB1
NPRL3
CENPBD1
SDHA
CCDC127
SYNGR4
SPPL2B
LSM7
VDAC3
DDRGK1
SAYSD1
TMEM141
MTRNR2L2
EEF1AKMT1
KDM8
PREB
FBRS
DAGLB
OSCAR
NDUFA3
EHMT1
HNRNPL
IFNAR1
MIS18A
SUMF2
C6orf136
FAM24B
RANBP3
FAM122A
RAD21
MOK
NAGK
PITPNB
CHMP7
HNRNPH1
RAB18
FAM98A
SPOP
POLR2J2
PPP2CA
NELFCD
CXorf38
PATL1
RSRP1
THAP7
USP10
RBM17
CASP2
CDC34
SHBG
FXR2
MRPL54
HP1BP3
WIPI2
LUC7L2
FMC1-LUC7L2
FMC1
PDRG1
DPF2
XRCC2
CDC7
SOD2
ACAT2
GATD3B
GATD3A
ZNF583
POLRMT
ARFGAP3
TMEM250
FAM71E1
EMC10
CHMP2A
SELENOI
ADGRF3
TMEM63B
MRPL14
DLGAP4
PTK2
MYPOP
SLC2A11
PDXDC1
ZC3H8
AMZ2
SARS1
POLR2J
BLOC1S4
MRPL45
CHD1
MAP2K7
ZMYM4
NDUFA8
MORN5
ALKBH5
LOC100287896
LIPT2
PALB2
DCTN5
SAFB
SAFB2
SMIM11B
SMIM11A
DYNC2I1
NOB1
ZNF12
SLX4
OARD1
NFYA
GMCL1
STX1A
XPO5
POLH
HEXIM1
SMG9
CAPZA2
RPL36
CCNT2
SMIM27
NUDCD2
HMMR
HASPIN
CCNQ
C8orf48
LRPAP1
WDR4
POLA2
MTCH2
TAX1BP3
EMC6
RABIF
FUT8
PTTG1IP
CYTH1
NUP50
HINFP
ESRRA
CNOT4
AP3B1
KCTD13
YEATS4
LOC100289561
THAP5
DNAJB9
SNAP47
JMJD4
POLR2J3
MAPKAP1
USF2
RNF32
CCSER2
USO1
IQCC
UPF1
CLIP4
NANP
MSL2
SLC30A4
DCAF8
CLN8
BANP
RRP1
PPME1
C2CD3
RGPD2
RGPD1
RAD23A
DFFB
CEP104
CC2D1A
C19orf57
LIG4
SMIM14
PPP6R1
ABCF3
ZBTB14
FAM120B
SCAF11
MTHFSD
SPDYE14
SPDYE10P
MAN1B1
ABCA3
FBXO31
MAP1LC3B
PAPOLA
TIGD6
HMGXB3
RNF149
TMEM63A
PIAS4
SH3YL1
ACP1
GNPTAB
RPP38
ZNF747
RALGAPB
CEP20
NUP107
GZF1
SREBF1
SRSF1
DNMT1
HINT1
TMED4
TDP2
ACOT13
WRNIP1
ZMYM1
FAM200B
TDRD7
KDM3A
MBD1
RTL10
GNB1L
ENDOV
FADD
DHDDS
ASNSD1
ASDURF
VPS13A
SBNO1
LINS1
ASB7
STS
PUDP
TMEM104
NAT9
HEATR3
STX8
CFAP52
ZNF576
IRGQ
SRD5A1
ROPN1L
UGGT2
ZNF248
ZNF652
UROS
BCCIP
POFUT2
SELENOT
GOPC
INTS13
FGFR1OP2
NAPB
ARPC2
DTX2
SNRNP70
TMEM70
CISD1
FZR1
MKNK2
SPECC1L
COQ3
UIMC1
INTS7
DTL
EID1
APC
ZNF473
VRK3
PINK1
TXNL1
CCT5
ATPSCKMT
CRB1
MINK1
NUP62
IL4I1
ATF5
PCIF1
MRS2
WWP1
TAOK2
TRMO
TENT4A
PVR
SSH1
PHF23
SMARCC1
BSN
LAGE3
TBC1D7-LOC100130357
TBC1D7
MORF4L1
CTBP1
MPHOSPH6
USP21
GDF5
CEP250
HBS1L
ANO10
ABHD5
PUSL1
ACAP3
SCAPER
TIA1
GOLGA1
TMEM120B
DEDD2
ADAM10
GPATCH8
PUM2
PLEKHA8
SIN3B
TRIM39
CDC42BPB
SEC16A
C9orf163
KIFAP3
SCML1
PRELID3B
THOC3
PPA1
TCF25
DYRK1B
WDR18
MTG1
ARMC2
SPEN
KATNIP
GTF3C1
PAPSS1
ERCC6
VARS2
P3H1
PPP1CB
CENPS-CORT
CENPS
TMEM109
RFXANK
BORCS8
KIF6
UPF2
EPS15L1
RBBP7
TCTA
RHOA
SEH1L
PGP
ALG8
C8orf37
MAGI1
GET1
TRAM1L1
PPP2R3B
OPA1
TFB2M
CNST
MYL5
ATP5ME
UTP18
MBTD1
NFXL1
COX6A1
PIGX
CEP19
NF1
SPATA4
GRB2
GAA
ZFAND3
SLC39A10
XPO7
MBD3
FKBP1A
WDR13
TRAM1
ZDHHC16
EXOSC1
ZNF667
ING1
NADK
NDUFS6
C1orf74
SHC2
TRIM37
PRPF39
CIPC
FBXO48
APLF
TIGD1
EIF4E2
TERF2IP
KARS1
C11orf80
HSF1
BOP1
COP1
NAPG
MFSD4B
CCDC130
C15orf40
CAPN7
DHX34
CCDC150
BIRC6
SNURF
SNRPN
TMEM182
MFSD9
ZNF664-RFLNA
ZNF664
CCDC92
CCDC93
RAB1A
SOS1
CDC42EP4
HSP90AA1
SLC30A5
ZHX3
DNAJC28
PTBP1
C17orf97
WDR5B
PAXIP1
BCAR1
SLC35B3
FAM227A
CBY1
LRBA
KANK1
SMAP2
MARS2
MRNIP
URGCP
UBE2D4
MRPL24
SRRM1
ZNF638
PRDM4
ALAS1
TBC1D32
NR1D1
SGTA
PTPN4
MAP2K2
LAMP1
MRPS18C
HELQ
TMEM209
HNRNPH3
DENR
AKAP1
PBLD
ERCC6L2
CDC5L
NPM1
SSNA1
ANAPC2
STYXL1
CACYBP
SPDL1
STXBP4
COX11
SLC25A11
RNF167
SEC22C
SKA3
MRPL57
SLC39A7
RXRB
RPL10A
NOP14
GRK4
SLC35E2A
MARCHF7
LOC730183
BTBD10
TIPIN
SRCAP
PUF60
NME1-NME2
NME1
ZZZ3
TMEM18
NPAS4
EIF2D
RPL12
LRSAM1
COPB2
TRMT61B
CCDC86
TUBGCP5
NUP214
XPC
LSM3
TAS1R1
NOL9
PRDX1
NOC4L
DDX51
COQ9
CIAPIN1
RPS19
DCAF6
MAD1L1
NCAPG
QRICH1
TOMM20
PPP4R3B
MPC2
NCOA4
ANKFY1
CWC25
CDK12
CCNC
TOR1AIP1
RPS11
ARF3
CCT8
RPS7
C5orf24
RPS6
C6orf89
SMG5
SLC15A4
SCAMP5
NAA35
MAGOHB
SLC35E2B
TAOK1
TBC1D5
PARK7
ECHS1
ASXL1
PSMD5
POP7
TMCO1
UHRF2
SUPT5H
JOSD2
GPAM
ERGIC2
WDR73
ZFP91
GPBP1
RBM42
APBA3
COASY
NOL11
AKAP11
POM121
HAUS5
MAPK14
TTC32
GPATCH3
RPL17-C18orf32
RPL17
MAK16
RFC5
CAND1
RPS28
NDUFA7
TBL3
LTV1
RBAK-RBAKDN
RBAK
ZNF286A
AURKAIP1
CHAF1A
SNX5
MGME1
FAM135A
NAA38
CYB5D1
PURA
FSIP1
GID8
DIDO1
DNAJC27
ATF2
SMIM10L1
PRH1-TAS2R14
GAS8
NKTR
NDUFA11
UBE2D3
DBR1
DARS1
ZBTB2
MRM3
GLOD4
HSPA4
ETFA
CEP350
AHCTF1
VMAC
STRIP1
CFAP70
EHD1
IREB2
MRPL55
MMS22L
UTP25
TTC23
LRRC28
NUF2
GMPPA
POLDIP3
RAB33B
LPXN
SIRT5
EIF4A3
PSMB2
HERC1
MATR3
EIF5
CYCS
ICMT
NOP16
HIGD2A
RSL1D1
TRIAP1
SHPRH
EIF5A
U2AF2
MAPKAPK5
PEMT
RBM15
SYS1
SRP19
AP2B1
FAM76A
FASTKD2
SUGP1
MAU2
MAP3K7
SCAND1
RPL27A
ATAD3A
RPS15
SRRT
CSDE1
SEC62
EFHC1
NFYC
AASDH
GTF2H3
EIF2B1
PRKDC
MCM4
VMP1
PTRH2
MBTPS1
DRG2
TMEM43
MICOS10-NBL1
MICOS10
CHCHD4
WDR43
CBWD5
KIAA1191
HSBP1
SLC25A4
SEPTIN7
RCC1
NUP153
MRPL21
IGHMBP2
MED1
CNP
LANCL2
MRPS7
GGA3
DSN1
CUL3
RPL7A
MED22
ADAT1
ZCCHC14
SF1
ATF7-NPFF
ATF7
DHX37
CD2AP
NBPF3
TMX1
ZNF346
CELSR3
DCTN2
RPL8
RFX1
CDC20
PXMP2
POLE
THAP1
FIP1L1
WDR27
C6orf120
THADA
GLCE
KIN
ATP5F1C
SPAG16
CIAO3
IKZF5
ACADSB
WWOX
PPM1G
DNTTIP2
SLC12A2
APTX
ARHGAP35
ZNF317
RBPJ
RPS29
RC3H2
TSEN2
B9D1
DCP1A
YIPF3
POLR1C
UBR3
GRWD1
MRTFB
CPLANE2
NAT10
WDR77
ATP5PB
CBWD3
ADPGK
RNF130
PHF7
BAP1
TGOLN2
FAF1
USP54
RBM26
SF3A3
SMG7
COPS3
CHUK
PCGF1
ZFC3H1
THAP2
AMACR
ATP5MC2
CFAP410
HSPH1
SRSF11
SMARCA5
RBM18
MRRF
STX16
MICU2
RNPC3
E2F6
CD320
CCDC77
AGBL3
NRBF2
CLPTM1L
RAD23B
TRAPPC2
OFD1
ANKRD13C
IPMK
RPRD2
TSSC4
PGRMC2
EIF2S2
PAXBP1
KIF22
TMEM127
CIAO1
NSUN3
DHFR2
DNAJB4
GDI2
PFKFB4
TSACC
CCT3
MTHFD1
IMP3
CCNT1
SNRPC
CBWD6
ASH2L
SIPA1L1
EXOSC10
XKR7
FANCD2
DHX9
C1orf53
INO80C
ATP5PO
PCBP1
IPO11
AGA
MFSD8
LIN7C
ABHD18
ZKSCAN2
POLR2E
DUS2
DDX28
ARF4
WDR6
EIF1AD
BANF1
YOD1
INKA2
DDX20
NRF1
TMEM183A
ZNF692
TIGD5
EEF1D
IFRD1
ETF1
RBBP5
ACAD9
TADA3
ARPC4-TTLL3
ARPC4
PFKFB2
TMX3
CCDC102B
APOLD1
DMAP1
SPG7
NPTN
ZNF420
GEMIN7
EIF2S1
ATP6V1D
ZC3H14
YIPF2
TIMM29
RELCH
PIGN
DLD
KBTBD6
DDX19A
TAB3
SMARCD2
SLC35B4
TMED3
IQSEC3
FAM149B1
ECD
SNRPB2
VPS13C
ERICH6
MRPS18B
CSNK1A1
ZNF182
SPACA5
DSE
RAPGEF6
RPS15A
UQCR11
GORASP2
ZNF414
UNG
METTL16
ELP6
SAXO1
RRAGA
NOL7
PIGF
CRIPT
PDCL3
NDUFS7
MED9
RLF
FITM2
TMEM101
SMC4
IFT80
TSPYL1
THAP12
GVQW3
CBLL1
MED23
CCDC59
PPIL3
NIF3L1
USP39
ERLIN2
DDHD2
SPAST
MOCS2
ASPH
CNTROB
AIP
RPS6KB2
EED
CCNI
ZNF136
CUL5
TBCCD1
BTF3
ZSCAN22
CARNMT1
RPL26
PIGW
MYO19
ZNF614
COX18
MYO9B
HAUS8
FUBP1
BRD2
CCNJ
SNX25
PNN
CFAP97
CREBZF
WDR74
MMAA
USP47
ZDHHC12
PDCD6IP
INTS9
HMBOX1
TATDN3
NSL1
SEC14L1
WASHC2C
RRM1
IPO4
C16orf91
CLN5
TMEM245
ASCC1
ANAPC16
CCNL1
SLC39A9
LSG1
ERH
NDUFS3
KBTBD4
INO80
ATP6V1C1
PGAM1
CLPTM1
SNRPD1
DDX42
CCDC47
RMI1
HNRNPK
UQCC1
RBM7
C11orf71
ATXN1L
MRPL40
HIRA
PCMTD1
AGL
TSPAN10
PTCD3