ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10476670 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◣ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
XKR7
IQSEC3
MTRNR2L2
L1CAM
CELSR3
GLRA1
RAB37
MTRNR2L8
HTR5A
CPLX2
RANBP3
EPHA10
CHGB
MAPK8IP2
BARHL1
SST
CHRNB2
SNAP25
GDAP1L1
ANK1
GPR6
UNC80
SCRT1
SRRM3
DNAJC6
CCDC92B
LHFPL5
PGBD5
NTSR2
SLC12A5
HES3
VGF
NPPB
KCNK12
PTPRN
OGDHL
MARCHF4
STMN3
VWC2L
KLF11
WDR74
NRSN1
MMP24
SEZ6
CRH
KDM3A
PDE1C
PDE4C
GRIA2
AATF
NDUFAF1
SCRT2
SCGN
CYB5R4
LEMD3
SLC39A3
ABCC6
ACSL6
BICDL1
MED23
GRM1
H4C12
RFC1
CHRM4
SCAMP5
PRMT5
RBM28
SVOP
GCFC2
SOD2
WTAP
WASHC2C
CDIP1
CHGA
TMEM181
IPO4
EVI5
PTPRS
RNF130
SEZ6L2
ASPHD1
KATNA1
AP3B2
IKZF3
DTD2
HPCA
ACTL6B
TIGD1
EIF4E2
PCNA
HS3ST2
HBQ1
TACO1
NPDC1
NOP14
GRK4
ODC1
ALKBH2
FAM227B
DTWD1
NDUFAF5
ESF1
NSUN5
DHDDS
SLC7A6OS
PRMT7
GOT2
PLEKHM3
SLC24A1
INTS14
KANSL3
MRPL58
RMND5A
SCG3
HEATR5A
SCFD1
RPL31
PTGES3
STX16
PMS2
AIMP2
NME1-NME2
NME1
SPAG4
RABGGTA
CDK5RAP1
DDX1
MIA2
MARCHF11
TCIM
NMS
CPNE4
DRD2
MFF
PAQR4
SIRT4
TOB2
MTF2
TMEM186
PMM2
CMTR2
NET1
FUS
DNAJC11
FBLL1
GTF3C3
ZC3H7A
OPRM1
DPY19L4
H4C15
H4C14
MNAT1
SUPT3H
ACY1
SURF6
DCLRE1C
TMEM169
PECR
TRIP4
PIK3R3
CEP295
ZFYVE27
GJA10
SDC4
LONP1
CATSPERD
RGPD2
RGPD1
CDC16
KCNH6
HNRNPH1
YARS1
S100PBP
EBPL
RBM18
MRRF
ZGPAT
ARFRP1
TRAF6
RAG1
GPR78
TRPM3
CWC25
SLC25A21
ARL6IP1
WDR36
CCNL1
FAM228B
SF3B6
HMGA1
RPLP0
HRH3
SLBP
MTIF2
SRFBP1
NHLRC1
FMNL3
IRF9
RTN2
POLDIP3
TINF2
FRA10AC1
R3HCC1
TPH2
TRIM67
KCNH4
CLVS1
FAM163B
GADD45A
ABCA3
SRP19
PMVK
USP14
TTI2
TOB1
RPS7
NEURL2
CTSA
NBPF1
SGTA
TMEM230
PKP4
LAMP1
SCAF11
ZNF420
DUS1L
HECTD1
KIF16B
LDHA
H1-2
CLCN7
RPL5
ANKRD36
IDH3B
PET117
KAT14
KRI1
PSMA1
SLC30A5
NOL7
C12orf57
GPCPD1
DHX15
ANKRD36C
C16orf72
SOWAHC
SEPTIN10
SNX17
EIF2B4
DBI
C2orf76
GPR158
GRIN1
PRLHR
GTF2H2C_2
GTF2H2C
NEU4
POLR2J3
DDX19A
SLC25A10
CETN3
CDCA7
ATP7B
ALG11
MLH3
POLR3E
NXF1
RHOB
WDR11
NABP1
POLR3G
MBLAC2
APOB
COMMD1
CCT4
CLUAP1
PDCD2L
CERS6
FTCDNL1
CSTF1
AURKA
CPQ
LPIN3
RPL12
LRSAM1
HBS1L
RPL37
RANBP2
LDAH
SSBP1
MPHOSPH10
MCEE
SLC38A2
NDUFS7
ZBTB4
POLR2A
EXOC2
DAXX
H2BC17
H2AC17
FAAH
UGT2B10
NUF2
INTS5
NRL
SRSF2
MFSD11
GRM2
XKR4
SLC6A5
AKAP10
RAD54L2
DGAT1
VRK2
CPNE9
FXN
ZNFX1
PHF1
WDR45B
LTV1
EFCAB13
NOC3L
LRP6
RBM45
MDP1
HMGN3
OPA1
SPOP
EIF2B3
LHX3
ENO1
PTDSS1
MTERF3
H4C11
NSFL1C
MRPL38
PARL
BZW2
ANKMY2
RABL2B
TUFT1
COMMD2
ZCCHC7
AHI1
FRG1
TOP3B
PSMD3
EXOSC6
CCDC107
N6AMT1
LRRC59
COPS6
GPX1
SDHAF1
RAB5IF
NPRL2
CYB561D2
CTXN1
EAPP
HMGCS1
KCNB1
DNTTIP2
SNRPG
TSFM
DBNL
MRPL21
IGHMBP2
PEX3
ADAT2
C1QBP
SAR1B
TUBGCP3
H1-10
ATP5MC2
SMARCD2
UBE2Q1
EEF2K
FAM207A
CRLS1
RRN3
DEF8
CX3CL1
CPSF1
ATR
CYP20A1
RTTN
MAT2A
H4C3
KIFC1
PRDX1
BMS1
TEFM
PCCB
MRPL39
SH3RF3
RPS15
SEC14L1
GARS1
CEP120
OSBPL8
PPP1R3C
NUDT16
CKLF-CMTM1
CKLF
VARS2
VPS33A
NOXA1
SLC25A3
UNC50
COA5
H1-4
SAYSD1
PTCD3
POLR1A
PCID2
CUL4A
RPS3
DPP10
SCG2
NEU1
SNAP47
JMJD4
EIF4A3
NCL
KIF2A
TATDN1
NDUFB9
CPPED1
MRPL27
EME1
IMPDH2
UROS
BCCIP
SNRPB
LRP2BP
ANKRD37
AHCY
FAM177A1
TM9SF1
CNPY3
MAZ
RGPD8
RGPD5
RGPD6
NAGA
DCP1A
SNRPD1
NR1H3
ACP2
TBC1D13
TMEM14B
ATP6V1B2
ABHD12
MC1R
EIF2D
TTC32
TMEM101
NFE2L2
DHX8
RPL37A
EDEM2
NIP7
COG8
H4C2
ZNF337
AURKAIP1
DNA2
EBAG9
ZNF292
SLC25A51
S100A8
ZNF565
ZNF146
ZC3H11A
ZCCHC3
VPS53
COX5B
CCR7
DHRS2
SGK1
HTR1A
SYNDIG1L
TMX3
CCDC102B
TSPAN10
NPLOC4
RPLP1
DDX18
C19orf53
HINT3
FERMT1
RIF1
CENPA
PNPO
CEP68
SNX18
SF3A3
USP30
TIMM22
ILF3
SNRNP200
LCLAT1
PIP4K2C
ZFPM1
PTPN1
MRPS23
FDXR
GPR89B
ARL5A
NCBP3
PPP1R3D
FAM217B
SETD6
PPP6R1
FANCD2
DSTYK
KAT5
TBC1D19
STK4
SRGAP1
NOL3
MPI
SMIM8
SMG1
RESF1
SCAND1
MRPS7
GGA3
E2F6
SLC3A2
AKTIP
ING5
BCL7C
PHF20
SLC25A13
FBXL17
ID2
RARS1
CITED2
P4HA1
ZNF398
ZNF425
GPN2
ZAR1L
BRCA2
HSPA1B
DHRS4
RGL2
C15orf48
NCOA5
RTEL1
C17orf75
GFM1
ADK
EPS8
C2orf42
ZNF367
BUD13
NID1
HES6
MSL2
PRKDC
MCM4
E2F3
ATF3
MYH7B
GSS
REX1BD
TMEM45A
ESYT3
C6orf136
INTS12
GSTCD
ZNF165
WASHC2A
DCAF11
CDC25C
FAM53C
BLOC1S6
ID1
HNRNPAB
DEF6
TUBE1
FAM229B
EPB41L4B
GSX1
DRG2
MRPL53
NAA20
SMIM26
KIZ
ARFGAP3
PNN
KANK1
ABCF1
NME6
ARHGDIA
AARS2
ITPRID2
LATS1
ZNF354B
ALDOC
RAB18
PGRMC2
SNRPB2
AGL
ITFG2
PCMTD2
AP3S2
PSMF1
POGK
ATP5F1E
SKP1
AGGF1
GINS1
NCOA3
ANKAR
COMMD4
FAM83D
MRO
APLP2
TAF1B
ZNF84
AAR2
PAFAH2
GEMIN2
TTLL4
EZH1
R3HDM2
CAMLG
RABGGTB
RUSF1
NXT1
SDHAF4
DPY30
BECN1
F7
ABCF3
EEF1AKMT1
GTF2H2
STK25
NUP54
VPS29
RAD9B
AMD1
CCDC83
SLC39A4
SIK2
FLRT3
ZNF606
NR1D1
RNASEH1
B3GNTL1
ZNF461
FANCL
RBBP6
NECAP2
VPS16
PCED1A
FAM160A1
SLX1B
SLX1A
BOLA2B
BOLA2
PSMG4
FOXJ3
SLC35A3
FTL
HDDC2
VPS72
SMPD3
CBWD5
CCDC150
ZNF721
PIGG
ATXN7L2
HDAC2
COX16
RNF227
TUBA1B
DOHH
PNPT1
H2AX
ALG1
XYLB
ZNF343
ZNHIT3
ACSL3
MAN1A1
GCH1
UQCC1
RPS3A
RPL22L1
MEST
TTC5
STARD4
NDUFS3
KBTBD4
SPRYD4
VPS25
PSMD7
GCA
TCFL5
NUDT1
MRM2
NSUN6
REXO5
ERI2
ARL5B
LOC389831
TRMT61B
AKAP11
MITD1
PLD6
CZIB
SEC22B
UCKL1
MIPOL1
SOX6
C11orf58
NUBP1
THUMPD2
ARID1A
C5orf63
TGIF2
SNX29
TRIM37
KBTBD6
ZNF554
RPS8
PSME3
DIP2A
WNT2B
TSN
RMND1
ARMT1
PSMA6
ACBD4
GGA2
COQ9
CIAPIN1
TDP2
ACOT13
TATDN3
NSL1
RSPH3
TRA2A
MRPL12
COPS8
ANAPC10
ABCE1
PBRM1
GNL3
MRFAP1
TMEM268
SARAF
TARS3
ADPRS
NAF1
MRPS35
TTC33
LYRM2
XRN1
UGDH
ABCB6
PCK2
DHRS4L2
SHH
FABP1
C5orf24
NUP153
ADPGK
TRAM1
PIGL
USP37
CNOT9
NUDT9
NUDCD1
EXO5
ROMO1
NFS1
RETSAT
MSH6
PRXL2A
ATP5F1B
SLC45A4
ERCC1
TMEM30A
RC3H1
NDUFA11
VMAC
ZNF248
GORASP2
TOP1
CDC42
CBX1
KIAA1958
C9orf147
VPS4A
PSMC3IP
MAPK8IP1
RPL10A
CCNC
TXNDC9
EIF5B
SLTM
SRSF7
DNAJC19
MRPL16
SMN2
SMN1
SLC44A1
MRPL10
LRRC46
RPL27
ATIC
COIL
ASB6
OSTM1
SMARCC2
RAP2B
CCZ1B
TF
PRKCE
CADM1
MAP2K2
TBL3
TRIAP1
NUP62
IL4I1
ATF5
YIPF2
TIMM29
MST1
ESCO1
SPG11
RTF2
CALM1
HLTF
ZSCAN25
METTL9
POLR2C
PPIL2
NUFIP2
ESD
COPB1
SOCS7
TAF3
CCN2
CCDC134
SULT1A1
TMED9
TVP23B
EEF1A1
CTR9
SP2
NUTM1
NOP10
BRMS1L
DDIT4
SELENOP
TGOLN2
STAG1
URGCP
UBE2D4
WFDC3
DNTTIP1
TRIM52
CBFA2T2
MVD
LINGO1
RPS10-NUDT3
RPS10
SULT1A4
SULT1A3
SERPINA1
LMCD1
ADGRG6
SYCP2
PAGR1
RTL10
GNB1L
EID2
USP36
MBTPS2
BNIP1
RPF2
RNF141
EPM2A
PPT1
ANKRD18A
RBL1
HESX1
APPL1
ARIH2
AXIN2
DHRS4L1
XPO5
POLH
NOB1
ABT1
HDAC4
RNH1
KDM4C
VPS52
RPS18
COX6C
ZNF326
FAM47E
TRAPPC6B
NGEF
RBMX
EPHX2
FAM47E-STBD1
SNRNP70
RPUSD4
FAM118B
ATG16L1
MANBAL
TBP
PSMB1
NDUFV3
RILPL1
LSM11
NUTM2E
BTG1
IER5
SAV1
DCTN1
ZNF468
HAAO
ZSWIM7
TTC19
EIF3B
POLR1F
PDE4A
LYPLAL1
FAM98B
RPS20
STX18
DDX56
XRN2
TMEM237
FAN1
ZNF23
POLR3D
TOMM5
STEAP1
RBM34
PGGT1B
DDX19B
GINS3
AARS1
ACTR3
LOC112694756
VGLL4
H4C4
WDSUB1
BCLAF1
VAPB
MRPL3
SH2B1
TUFM
AGK
PPA2
ZNF696
MCUR1
ZNF212
HEXD
EEF1AKMT2
ZNF501
TREH
CDKN2B
SMARCA4
SRSF1
MAPK14
SPG7
THNSL1
RNF216
PSMD12
SLC22A4
PTCD1
CPSF4
RANGAP1
PTPRA
KLHL9
JPT1
RFWD3
ALDH7A1
HROB
ZC3H7B
ERCC6L2
KIAA1191
SEH1L
POLR3B
RPL23
TCTE3
ERMARD
ANKRD40