ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025674 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◣ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

GPAM
SLC35E2A
MTRNR2L2
SLC35E2B
SSNA1
ANAPC2
NOC4L
DDX51
MRPL55
CWC25
MED9
RBM42
DRG2
SIRT4
NUP153
LSG1
MTRNR2L8
PSMB2
ADPGK
FAM149B1
ECD
MRM3
GLOD4
AP2B1
NOP9
DHRS1
MAGOHB
LANCL2
TRMT61B
CCDC86
TBL3
AASDH
TRIAP1
SMG8
MRPL2
KLC4
PHF7
BAP1
SRRD
HPS4
DNAJC19
UTP25
PDCD7
FAF1
ERCC6L2
SPTLC1
RPL9
LIAS
RRNAD1
ISG20L2
PSMB6
FAM228B
SF3B6
NME1-NME2
NME1
GTF2H3
EIF2B1
RPS6KB2
ATXN1L
DCAF8
BRAF
RMDN3
BDP1
COA8
BAG5
LMBR1
WDR74
FBXO34
C12orf57
TBRG4
RRM1
JOSD2
PTOV1
DPH5
NCOA5
PEX10
HAUS5
RANBP2
RPLP0
ELP3
RBBP5
ZSWIM7
TTC19
SSU72
NUDT9
ZNF330
STXBP4
COX11
CCDC59
SMAD7
MTF2
PPP2R3B
WASHC5
NSMCE2
RPS7
EPRS1
DHX40
CENPE
COMMD1
CCT4
IPO4
WFDC3
DNTTIP1
KPNB1
PKN2
RLF
RALGAPA1
TUBGCP6
FANCD2
NDUFA10
H4C11
CTDP1
POMZP3
CCAR2
PMVK
ANKRD40
FAM98B
TCF4
NDUFS7
SETD3
CCNK
TMEM259
ABT1
TTI2
ZDHHC3
EXOSC7
ZNHIT6
C7orf50
UBB
FAM122A
SRSF11
DNAJB4
LRRC40
H4C12
ZC3HC1
LEO1
NUP214
ZNF547
TRAPPC2B
CDK11B
INTS12
GSTCD
MRPL44
RAVER1
SHF
PEMT
FOXJ3
TIPIN
RPS8
FLCN
H4C15
H4C14
PRMT5
SMG5
VPS37B
ARL6IP1
DENR
NEURL4
NBEAL1
RNF166
CTU2
GGCX
C8orf33
COPS3
DLAT
ID1
TACO1
CRLS1
GBA
SPRTN
EXOC8
PHF12
SRSF10
N6AMT1
DNAJA3
ANKRD26
RAB35
CCDC12
ADI1
SUGP2
ARMC6
LUC7L2
SMARCA4
VDAC3
XRCC5
MLST8
POU2F1
STK32C
LRRC27
C10orf88
FAM222B
BANP
PDRG1
TUBD1
RPS6KB1
FAM220A
PAGR1
KHDRBS1
PRMT2
ENTPD6
POLA2
SDHA
CCDC127
CXorf38
RAD21
FAM98A
RANBP3
ACTN4
BNIP3
LONP1
CATSPERD
SNAP47
JMJD4
SAYSD1
NBPF1
VPS26B
NCAPD3
XPO5
POLH
ZC3H8
FAM200B
SYNGR4
TOLLIP
MCRS1
CENPBD1
PTPN4
NPRL3
PPP6R1
ATP6V0E2
SAMHD1
MAP2K2
THAP7
RPP38
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
INTS13
FGFR1OP2
RABIF
LAMP1
DDRGK1
FAM24B
MAN1B1
ABCA3
HNRNPH1
CHMP7
C1orf74
FMC1-LUC7L2
MRPL54
MRPS18C
HELQ
CKLF-CMTM1
CKLF
SPPL2B
LSM7
MTHFSD
CBX5
RAB18
EID2B
MYPOP
ZNF12
WIPI2
HNRNPA1
HNRNPL
FMC1
FAM71E1
EMC10
PREB
NAGK
TMEM250
NDEL1
MIS18A
IFNAR1
TMEM209
NANP
XRCC2
SH3YL1
ACP1
HNRNPH3
RRP1
SMIM11B
SMIM11A
HASPIN
ALKBH5
LOC100287896
LIPT2
SLC2A11
SUMF2
KDM8
TRIM37
AKAP1
PBLD
PITPNB
CRTC1
PATL1
RCBTB2
SOD2
PPP1CB
NOB1
MAP2K7
CDC7
PPP2CA
YEATS4
FADD
CDC5L
TMED4
NPM1
MOK
SELENOI
ADGRF3
SLX4
MRPL45
WDR4
STYXL1
NELFCD
CACYBP
LOC100289561
CCNT2
SPDL1
HINT1
TMEM141
SLC25A11
RNF167
SEC22C
PTK2
RPL36
CHD1
SKA3
MRPL57
OPA1
ZNF576
IRGQ
SRSF1
SAFB
SAFB2
OARD1
NFYA
SLC39A7
RXRB
RPL10A
NOP14
GRK4
MTCH2
USP21
MARCHF7
LOC730183
BTBD10
SRCAP
PUF60
RBM17
TRMO
ASNSD1
ASDURF
TXNL1
RTL10
GNB1L
SNRNP70
ZZZ3
TMEM18
POLR2J3
NPAS4
EIF2D
FUT8
RPL12
LRSAM1
FAM120B
NUP107
SMG9
COPB2
VPS13A
RSRP1
SGTA
AMZ2
TUBGCP5
XPC
LSM3
ZNF583
CCT5
ATPSCKMT
TAS1R1
NOL9
PRDX1
NUP50
COQ9
CIAPIN1
HP1BP3
RPS19
DCAF6
MRPL24
MAD1L1
MSL2
NCAPG
SPOP
RALGAPB
DHDDS
QRICH1
TOMM20
RAD23A
PPP4R3B
MPC2
GMCL1
NCOA4
ANKFY1
CDK12
CCNC
TOR1AIP1
RPS11
ARF3
OSCAR
NDUFA3
CCT8
C5orf24
RPS6
TDP2
ACOT13
GRB2
C6orf89
THOC3
SLC15A4
SCAMP5
NAA35
THAP5
DNAJB9
TAOK1
TBC1D5
DPF2
EEF1AKMT1
PARK7
ECHS1
ASXL1
PSMD5
POP7
TMCO1
FBXO31
UHRF2
SARS1
SUPT5H
CCNQ
SRRM1
INTS7
DTL
CASP2
ERGIC2
CRB1
DYNC2I1
WDR73
ZFP91
GPBP1
TAX1BP3
EMC6
APBA3
COASY
NOL11
PPME1
C2CD3
AKAP11
POM121
BLOC1S4
MAPK14
ACAT2
GDF5
CEP250
TTC32
CAPZA2
AP3B1
GPATCH3
RPL17-C18orf32
RPL17
SMIM14
MAK16
RFC5
ARFGAP3
COP1
CAND1
RPS28
NDUFA7
LTV1
RBAK-RBAKDN
RBAK
ZNF286A
AURKAIP1
CHAF1A
SMIM27
NAPG
SNX5
MGME1
TIGD1
EIF4E2
FAM135A
NAA38
CYB5D1
MRS2
PURA
C6orf136
FSIP1
GID8
DIDO1
DNAJC27
ATF2
CISD1
SMIM10L1
PRH1-TAS2R14
GAS8
FBRS
NKTR
NDUFA11
PDXDC1
UBE2D3
DBR1
DARS1
ZBTB2
MAP1LC3B
WDR13
DYRK1B
HSPA4
ETFA
CEP350
AHCTF1
VMAC
STRIP1
CFAP70
EHD1
IREB2
RNF149
NDUFA8
MORN5
USP10
CDC34
SHBG
FXR2
MMS22L
XPO7
TTC23
LRRC28
NUF2
PAPSS1
SMARCC1
STS
PUDP
GMPPA
POLDIP3
SCAF11
RAB33B
ZMYM4
LPXN
SIRT5
PALB2
HSF1
DCTN5
BOP1
EPS15L1
C8orf48
EIF4A3
SRD5A1
USO1
TMEM70
HERC1
PRELID3B
MATR3
HINFP
EIF5
UROS
BCCIP
CYCS
ICMT
ZNF638
NOP16
HIGD2A
RSL1D1
MINK1
SHPRH
ZNF664-RFLNA
ZNF664
CCDC92
CC2D1A
C19orf57
WDR18
EIF5A
U2AF2
MAPKAPK5
KIFAP3
TFB2M
CNST
MTG1
ARPC2
RBM15
SYS1
SRP19
MYL5
ATP5ME
FAM76A
FASTKD2
SUGP1
MAU2
MAP3K7
TMEM104
NAT9
SCAND1
ESRRA
RPL27A
ATAD3A
RPS15
HBS1L
SRRT
CSDE1
SEC62
EFHC1
NFYC
DFFB
CEP104
PRKDC
MCM4
UTP18
MBTD1
TMEM63B
MRPL14
VMP1
PTRH2
TIGD6
HMGXB3
MBTPS1
TMEM43
MICOS10-NBL1
MICOS10
CHCHD4
EID1
WDR43
CBWD5
KIAA1191
GATD3B
GATD3A
HSBP1
SLC25A4
SEPTIN7
RCC1
MRPL21
IGHMBP2
TMEM63A
MAPKAP1
TENT4A
MORF4L1
MED1
NUDCD2
HMMR
TIA1
CNP
PRDM4
MRPS7
GGA3
DSN1
CUL3
CCDC93
PUM2
MKNK2
RPL7A
MED22
ADAT1
ZCCHC14
MRNIP
SF1
WRNIP1
GZF1
C15orf40
ATF7-NPFF
ATF7
DHX37
CD2AP
NBPF3
TMX1
ZNF346
CELSR3
CHMP2A
DCTN2
POLR2J
RPL8
ALG8
GOLGA1
RFX1
CDC20
NR1D1
PXMP2
POLE
THAP1
FIP1L1
WDR27
C6orf120
THADA
GLCE
KIN
ATP5F1C
SPAG16
CIAO3
IKZF5
ACADSB
WWOX
DLGAP4
PPM1G
DNTTIP2
POLR2J2
SLC12A2
APTX
ARHGAP35
ZNF317
RBPJ
RPS29
RC3H2
KDM3A
C8orf37
TSEN2
B9D1
SBNO1
DCP1A
YIPF3
POLR1C
UBR3
PIAS4
ING1
GRWD1
MRTFB
CPLANE2
NAT10
WDR77
ATP5PB
CBWD3
PTBP1
RNF130
TGOLN2
ENDOV
USP54
RBM26
SF3A3
LINS1
ASB7
SMG7
ZNF248
CHUK
PCGF1
ZFC3H1
THAP2
AMACR
ATP5MC2
CFAP410
HSPH1
SMARCA5
RNF32
RBM18
MRRF
MBD1
CAPN7
STX16
MICU2
UIMC1
RNPC3
E2F6
CD320
CCDC77
AGBL3
NRBF2
CLPTM1L
RAD23B
ZBTB14
TRAPPC2
OFD1
ANKRD13C
IPMK
RPRD2
TSSC4
PGRMC2
EIF2S2
PAXBP1
KIF22
TMEM127
CIAO1
UPF1
NSUN3
DHFR2
CNOT4
GDI2
PFKFB4
TSACC
CCT3
MTHFD1
NAPB
IMP3
CCNT1
SNRPC
WWP1
CBWD6
ASH2L
DNMT1
SIPA1L1
EXOSC10
XKR7
DHX9
C1orf53
INO80C
ATP5PO
PCBP1
ANO10
ABHD5
IPO11
AGA
MFSD8
LIN7C
ABHD18
ZKSCAN2
POLR2E
NFXL1
DUS2
DDX28
ARF4
WDR6
EIF1AD
BANF1
YOD1
INKA2
DDX20
SEH1L
NRF1
TMEM183A
ZNF692
TIGD5
EEF1D
POFUT2
PPA1
IFRD1
ETF1
ACAD9
TADA3
ARPC4-TTLL3
ARPC4
PFKFB2
TMX3
CCDC102B
PRPF39
APOLD1
DMAP1
C11orf80
FZR1
SPG7
NPTN
ZNF420
GEMIN7
EIF2S1
ATP6V1D
ZC3H14
NUP62
IL4I1
ATF5
YIPF2
TIMM29
RELCH
PIGN
POLRMT
DLD
KBTBD6
CCSER2
SPEN
DDX19A
TAB3
SLC30A5
SMARCD2
SLC35B4
IQCC
TMED3
IQSEC3
CENPS-CORT
CENPS
SNRPB2
VPS13C
ERICH6
MRPS18B
CSNK1A1
ZNF473
VRK3
ZNF182
SPACA5
HEXIM1
PHF23
DSE
RAPGEF6
RPS15A
PCIF1
UQCR11
KCTD13
GORASP2
ZNF414
UNG
METTL16
ELP6
TMEM109
SAXO1
RRAGA
NOL7
PIGF
CRIPT
PDCL3
ZNF652
FITM2
SREBF1
TMEM101
SMC4
IFT80
TSPYL1
THAP12
GVQW3
CBLL1
MED23
PGP
STX1A
PAPOLA
PPIL3
NIF3L1
TRAM1
USP39
ERLIN2
DDHD2
SPAST
CLIP4
MOCS2
ASPH
SPECC1L
CNTROB
AIP
EED
KATNIP
GTF3C1
CCNI
ZNF136
CUL5
TBCCD1
BTF3
ZSCAN22
DHX34
CARNMT1
TAOK2
RPL26
PIGW
MYO19
ZNF614
COX18
APC
MYO9B
HAUS8
RFXANK
BORCS8
FUBP1
ERCC6
COX6A1
BRD2
CCNJ
SNX25
PNN
CFAP97
CREBZF
FAM227A
CBY1
MMAA
USP47
ZDHHC12
PDCD6IP
INTS9
HMBOX1
TATDN3
NSL1
UGGT2
ARMC2
SEC14L1
WASHC2C
GOPC
C16orf91
CLN5
TMEM245
ASCC1
ANAPC16
CCNL1
SLC39A9
ERH
TERF2IP
KARS1
NDUFS3
KBTBD4
HEATR3
INO80
ATP6V1C1
MARS2
PGAM1
CLPTM1
LIG4
SNRPD1
DDX42
CCDC47
RMI1
HNRNPK
UQCC1
RBM7
C11orf71
LAGE3