ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1053924 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX20532174: hESC H1

◢ SRX20532175: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◣ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

GSN
RAB14
CAMTA1
KCTD18
NPAS4
POLR3H
ZNF555
CALR
HTR5A
XKR7
MTRNR2L2
TDRD7
IQSEC3
MTRNR2L8
CPLX2
GBA
UTP20
NBPF1
CYB5R4
ZNF335
NUF2
POLR2J3
PAXBP1
NME1-NME2
NME1
WASHC2C
NDUFS7
RRP15
CRNKL1
CFAP61
FANCD2
NAGPA
TRMT1
ARCN1
RBM48
PEX1
KXD1
SLC35A4
APBB3
UTP25
HEXA
NEURL2
CTSA
ZMPSTE24
NUP214
SUMF1
STX16
TIPARP
HPCA
RBM19
SPNS1
LAMP1
RAB37
PPT1
CCDC107
VPS33A
PSMD9
HPD
ZNF77
AHCY
CRBN
SLC39A3
IBA57
QTRT1
WASHC2A
RNF187
BARHL1
SCFD2
TRIP4
WDR74
SSBP1
TMEM248
YJU2
TMEM242
EIF2D
EXO1
SNAP25
DHDDS
WASHC5
NSMCE2
COPS7B
MARCHF4
BIRC5
VPS50
HEPACAM2
CELSR3
IDH3B
OSCAR
NDUFA3
TTC26
SMG8
USP35
KCTD21
TRMO
ZEB1
P4HA1
CCNG2
GATB
MTFR2
METTL1
EEF1AKMT3
SPATA2
UBFD1
EARS2
IQGAP3
ZCWPW1
MEPCE
TPH2
CHGB
IPO4
EPHA10
NOL8
CENPP
SPOP
ITGB3BP
EFCAB7
RPS19
SVOP
PI16
ZCCHC7
LARP1
ASMTL
TDRKH
CDK7
KNL1
NEK2
RBBP5
MIS18A
MTF2
FAM227B
DTWD1
RTTN
TIGAR
SARS1
DRG2
NFE2L2
TTLL4
RABL2B
COMMD2
NDUFS3
KBTBD4
FBRS
INTS12
GSTCD
HAGH
FAHD1
MAPK8IP2
L1CAM
HMGB1
COMMD9
NUP107
NEIL3
POLM
KAT5
SF3A3
TIMM17A
KLHL18
KIF9
MRPL27
EME1
ZFPL1
CDCA5
CDK5RAP1
BLOC1S1
EIF1AD
BANF1
CCNA2
PAFAH2
GTF3C3
COMMD4
WDR36
GPATCH3
MRM3
GLOD4
ATG14
BNIP3L
TRUB2
COQ4
DHX40
SOD2
DNAJC5
RFX1
SUPT7L
SLC4A1AP
STX18
GSTA4
CPPED1
POLR3F
DZANK1
KIF18B
USP54
FNBP1
KIAA0895
SFSWAP
PSME3
SLX1B
SLX1A
BOLA2B
BOLA2
RBM28
CASC3
RFC1
H4C8
NOS3
TOMM22
N6AMT1
CSTF1
CCDC59
AURKA
EDC3
TXLNA
TMEM199
POLDIP2
LRRC59
NCAPH
TSFM
PWWP2A
CRKL
UBE3B
RPS29
VPS37D
CWC25
HIBADH
TOP3B
ZNF830
CCT6B
SLC45A4
PLEKHM3
UBE2O
AANAT
RAD51
ASF1A
CFAP54
PDE4A
TMCO3
DCUN1D2
SLC12A9
WDR4
GOLGA7
UTP11
TRIAP1
MFSD1
ZNF684
WTAP
PEX3
ADAT2
CCDC86
MRPL44
ATR
DDX18
RTF2
LUC7L2
SSNA1
ANAPC2
NUDT15
EBAG9
AP3S2
MRPL40
HIRA
TSR3
GNPTG
CBLL1
GRWD1
HUS1
MED23
FBXO5
RRP12
VTA1
NMBR
ZC3HC1
STAM2
SKA1
ESCO2
TRMT6
MCM8
SGO1
C16orf71
ANKS3
GDAP1
MTIF2
SLC25A51
USPL1
PGAM5
BOLA2-SMG1P6
H4C15
H4C14
COASY
GTF2H3
EIF2B1
SAP30BP
RECQL5
BCAS3
ATP6V0D1
UBE2L3
YARS1
CCDC106
SMYD5
C12orf66
DZIP3
CIP2A
ATL3
CCDC88A
KLHL20
DPY19L4
NDUFAF5
ESF1
COX16
ADPRS
PRRC2B
SUPV3L1
MRPL45
GLRA1
TMEM208
LRRC29
TBC1D19
TBRG4
C8orf37
EBNA1BP2
CFAP57
DHX37
TRAPPC6A
BLOC1S3
SEC31A
RGPD2
RGPD1
NAGK
C8orf33
PPWD1
CENPK
CKAP2L
ARFGEF2
SNRPE
XRCC2
KIF20A
BRD8
CCDC146
TACO1
S100PBP
PFDN4
PCIF1
NAT10
NUP54
STAT3
NRL
DCAF11
NLE1
POLR3E
NOP16
HIGD2A
CEP135
ACVR1
NSUN4
SELENOH
PGBD5
POLG
LTV1
GTF3C4
DDX31
FMC1-LUC7L2
MRPS15
FBXL13
ARMC10
HDAC2
FXN
POLR3B
PBK
YTHDF2
SASS6
CENPS-CORT
CENPS
GPATCH4
RPTOR
GTPBP10
THAP9
ACVR2A
PMVK
EIF3F
PUS10
PEX13
TFPT
PRPF31
MRPL21
IGHMBP2
NUP35
NOL6
MTBP
MRPL13
TMEM41A
NR6A1
KDM3A
QTRT2
CCDC191
URB1
RGL1
UNG
RBM42
OGDH
TMEM186
PMM2
PRCP
DDIAS
GTF2H4
FAM98B
C5orf51
FANCI
CCNL1
SLC24A1
INTS14
CMSS1
RPS7
UFD1
CDC45
TTC31
UTP3
E2F6
AAR2
INTS7
DTL
INTS5
OPA1
SNX16
ATP5F1E
TTC27
RLF
RABEP2
ARPC5
FAM161A
GON4L
POM121
ITFG2
MRPS23
ZGRF1
LARP7
NOL10
TFIP11
LSM5
TATDN3
NSL1
RRS1
CCNB1
TEFM
P2RX6
USP30
POLR3D
TAF13
TSN
TFB2M
CNST
ING3
VIM
CBWD5
HNRNPD
DNAJC25-GNG10
DNAJC25
CFAP299
CDC73
RABGAP1L
DPF1
MCM7
AP4M1
PRAME
EXOSC5
BCKDHA
SECISBP2
IL1R1
MRPS18C
HELQ
CFAP298-TCP10L
CFAP298
TMEM222
AP1M1
NCOA7
SACM1L
HEATR1
MRPL39
DUS2
DDX28
PUM3
KIF15
KIAA1143
GCDH
MMAA
ANLN
CENPF
RRM2
TMEM181
GATAD2A
PIKFYVE
PARL
CACTIN
SMN2
SMN1
RAD54L
CNOT4
BOD1
SNRPB2
IREB2
GFM1
NUCKS1
RNF166
MARCHF8
CTU2
IPO11
KIAA1586
WFDC3
DNTTIP1
INO80B
UBE2Q1
RAB11A
NMNAT1
LZIC
CDC25B
FAM133B
FAM228B
CLK3
PIGU
USP2
ZNF165
SEC13
ZBTB45
BNIP1
BUB1B
TOP3A
SMCR8
PNO1
MIS18BP1
CDC6
RPAP3
MRPL1
DSTYK
THAP7
RBKS
BABAM2
AARS2
ZC3H15
SMIM12
DCAF10
DPH1
TRIT1
SKA3
MRPL57
ZCCHC14
PGK1
NPPB
CDT1
ACOX3
TRMT61B
MRPL48
GTF2H2C_2
SNRPC
STAT1
ABCB8
KCNB1
POC5
NEUROD4
CYRIB
RHEBL1
TBP
PPP6R1
BLCAP
FMC1
VPS29
RAD9B
SKIV2L
NELFE
MITD1
ULK4
RAD54L2
NOL7
ZAR1L
H4C3
BRCA2
GTF2H2C
SPHK2
H6PD
WDR62
THAP8
MCOLN1
TMEM259
G6PC3
ZNF558
PSMD3
TIGD1
EIF4E2
SLC44A1
VPS35
NSA2
GFM2
WDR11
PIH1D2
NKAPD1
SIRT4
GRN
AP5Z1
KLHL32
TIMM9
KIAA0586
DCLRE1B
AP4B1
DNAJC11
SMARCD2
SHCBP1
FAM207A
RPL27
PPIL2
AURKB
PIGBOS1
PIGB
EIF2B3
XRN2
FBXW8
CCT2
GTF3C5
MRPS35
CFAP20
PALB2
KRR1
YIF1A
PAK1IP1
C6orf52
GFI1B
LSG1
TMEM101
SHC1
DDX41
KIF2C
ANKRD12
TAMM41
DDIT4
ZNF721
PSMB1
PIGG
C6orf89
FAM72C
SYNJ1
TROAP
PFKM
CAP1
KDM1A
SYT11
NUP155
VPS11
TOR1A
TCP11L2
TICRR
SCG3
DMAP1
KDM2A
AIMP2
PPIH
RC3H2
EIF3H
NOC3L
CCDC142
INO80C
PRMT2
SUGCT
MPLKIP
CKS1B
CBWD3
WDR46
TFB1M
PFDN6
NBN
SMG7
PRMT5
SH2B1
IGF2BP3
FBXW9
PHOSPHO2
CCDC173
NOC4L
DDX51
XKR9
LACTB2
ARHGDIA
IRF9
SF3B6
SLC33A1
LRRC49
POU2F1
DCTN5
MRPS33
HCFC2
GLT8D2
DCT
KYAT1
THAP10
TXNDC9
OXNAD1
DPH3
C2orf42
PPIP5K2
GIN1
TBL3
IFT46
STX6
RING1
RBM45
EXOSC3
LRP2BP
ANKRD37
AJUBA
POLR2J
ATP6V1C1
SRRM3
SRSF11
PNPT1
MOK
C12orf73
BLM
HPS4
MIA3
RAD9A
U2SURP
KLHL12
DDX19A
AGBL3
POMZP3
CERCAM
PSMB7
YBEY
DDX21
ZCCHC4
DNAJB12
BMS1
ACTR6
ALG10
SGO2
GTF2H2
PHB2
GPR158
PTPN4
PMS2
VARS1
SCNM1
LYSMD1
CYB561D1
CCAR2
GET3
ZSCAN22
ZDHHC12
TRAPPC9
SMIM30
LRRC37A3
TTC21B
TMED1
PARPBP
NUP37
TOMM40
RPS27L
C2CD5
GALK2
VPS45
SRRD
OAZ3
MRPL9
RBSN
FOXJ3
ZNF473
VRK3
DYNC2I1
MTDH
RIMBP3C
RIMBP3B
RBL1
SEC22B
RUVBL1
ZDHHC24
ACTN3
VIRMA
RPA2
SLC35B1
RAD51AP1
C12orf4
TMEM230
PDE1C
EIF5B
RNASEH1
SECISBP2L
TTK
ABT1
DCP1A
TTI2
ENDOV
LAMTOR5
DNTTIP2
IMP4
CCDC115
ERMAP
PSMF1
DLGAP5
COMMD1
REXO4
CLUAP1
ESYT2
TIMM10
UGGT1
DDX1
ADPGK
ANKRD31
ZNF778
SGSM1
MRPL3
ATAD2
SLF2
DSCC1
DMAC2
VAC14
VPS26C
DDX49
COPE
SEPTIN9
FRA10AC1
PARP2
PLS1
RAD18
ERAL1
TM9SF4
TSEN54
CASKIN2
ALG1
KAT6A
CHST12
RAPGEF6
NDUFC2-KCTD14
NDUFC2
MRTO4
EMC1
C16orf46
CYREN
CENPW
COPS8
SNX17
EIF2B4
TMEM9
SLC29A3
MAN2C1
COPS4
RIOK1
MMUT
CENPQ
CAGE1
MPHOSPH10
MCEE
DUS3L
PIP5K1A
LTN1
AKAP1
SWSAP1
TAF6L
TAF3
GRPEL2
RTN4
NADK2
SLC25A26
AIP
THADA
ANG
PCNA
RIOK3
PELP1
PAK4
OIP5
NUSAP1
JMJD1C
ECSIT
DIABLO
TBC1D30
CCNC
POLR1B
PDE4C
ILF2
POLD3
FBXO48
CDC20
APLF
CCDC77
RPL18
NUDT2
KIF24
MARCHF2
CLSPN
ZNF408
ARHGAP1
SNX1
FBXO4
ABCF1
ZNF668
D2HGDH
FAM98A
PCM1
DST
EPRS1
NUP42
WDPCP
MDH1
ASNS
ALKBH3
MOB4
TSEN15
NDUFAF1
MCM10
FAF1
S100A13
ZSCAN25
BBS1
FAM200B
TVP23B
USP32
NOLC1
KNTC1
FAM135A
FAM149B1
ECD
NSFL1C
AMZ2
MVK
ZNF391
BAG6
LZTFL1
BCAR3
TTC3
CTCF
IARS1
EEF1AKNMT
CKMT1B
SYF2
SPG21
SAR1B
POLR1F
MTR
SDAD1
IPO13
NUDCD3
NDUFAF4
FAM3C
BRAP
ACAD10
ZSCAN30
ASB6
AP1S1
ENOSF1
HBP1
ZBTB40
TNPO3
BBS5
PC
PPIL1
GNS
SCRT1
CBWD6
DNAJC2
RABGEF1
TUT1
TOMM5
HAUS5
TSC22D4
NTSR2
SST
KCTD9
CDCA2
NGDN
ZNF383
WDHD1
SOCS4
PPAN-P2RY11
PPAN
STMN3
DNPEP
MRPL38
TIMM21
FCF1
FBXO15
AREL1
ZNF212
MAD2L1
DHRS13
MOB1B
KCTD5
NTAQ1
PPIL3
NIF3L1
TANK
LONP1
CATSPERD
SCRN3
CIR1
STAG1
SHQ1
DPP8
PLK1
EMC4
NR1H3
ACP2
CAST
UCHL5
RO60
DDX19B
GLT8D1