ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3010110 | A549
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◣ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

SNX16
MTRNR2L2
MTRNR2L8
NAGPA
UBE3B
VPS37D
PPWD1
CENPK
MRM3
GLOD4
ZNF830
CCT6B
GTF3C5
SGSM1
SFSWAP
SAP30BP
RECQL5
ATG14
RFX1
TIMM9
KIAA0586
OSCAR
NDUFA3
ATG16L1
NR6A1
EOMES
TOP3A
SMCR8
COPS7B
NPAS4
PIGBOS1
PIGB
ARHGAP45
CENPM
SMG8
TMEM199
POLDIP2
IDH3B
BIRC5
CDK1
ITGB3
DRG2
TMEM101
C8orf33
CRBN
PDLIM7
NCAPH
ESCO2
NUF2
SUSD5
PAK4
CPPED1
RRM2
ZNF335
DZIP3
CIP2A
RTN4RL1
HAGH
FAHD1
GRWD1
ZCCHC14
EIF2D
DDX23
PSMB7
CHST12
IL3RA
PLK4
ZFPL1
CDCA5
UBFD1
EARS2
POLQ
NEK2
PELP1
PSMD9
HPD
U2SURP
MED6
SUMF1
NAE1
SFRP5
HOXA7
AHCY
MED24
KIF20A
BRD8
TOMM22
NUCKS1
KITLG
SPNS1
FXN
SEMA4B
TCTN2
SYNJ2
SLC47A1
NGDN
ZNF331
NUDT8
CYLD
PTPRA
GET3
SLC29A3
GALR2
IQGAP3
TIMM22
C1QTNF6
TICRR
FANCD2
CACTIN
BRCA1
YEATS4
TRIM26
EXO1
NEFL
TRMT1
DEPDC1
NOM1
STK25
PRCP
DDIAS
SLC27A2
SWSAP1
TSEN54
CASKIN2
ZGRF1
LARP7
ERAL1
SOGA1
PEPD
VPS50
HEPACAM2
CDC6
CDC25C
FFAR4
SPOP
TTC31
RPTOR
CCDC142
TSR1
SGSM2
NPPC
COMMD9
SGO1
PRKCQ
UTP20
MTBP
MRPL13
VIRMA
CCDC22
SF3B3
COG4
NEURL2
CTSA
SETD1A
XAB2
NR2C1
WASHC2C
KXD1
USP35
KCTD21
DMAC2
GPATCH3
TROAP
SMPD4
MZT2B
CCNA2
TFPT
PRPF31
UBE2Q1
RAD18
NLRX1
PBK
TKT
KIF16B
ZCCHC7
SKA1
COASY
GTSE1
RBM42
SLC38A10
ELP5
CTDNEP1
TRAPPC2L
GALNS
FANCI
MRPS35
SGO2
BLVRB
MRPL45
MRPS15
CENPF
FAM111A
ZDHHC24
ACTN3
POC1A
METTL14
PLD3
C19orf47
RBM48
PEX1
TTK
PPIL4
RAD54B
P2RY1
LDLRAP1
CCDC58
ATP5MF-PTCD1
ATP5MF
TMC6
TRIP4
EIF3F
STIL
UBE2O
AANAT
ZC3HC1
FAM72C
IRF2BP1
IQGAP2
RPUSD4
FAM118B
RNF130
FBXL19
ATAD5
DNMT3A
RBM19
SPATA2
ABCC3
ZCWPW1
MEPCE
POFUT1
PLAGL2
NTAN1
TCIRG1
LARS2
ARHGEF1
TTC38
RAB20
RRP15
WDR74
PPT1
AURKB
SPHK2
SRGAP2B
FAM72D
RPL18
TMEM242
GATB
EIF3H
FGF18
VSTM2L
SHCBP1
ASPM
KANK2
CSTF2
POLR3F
DZANK1
MRPS7
GGA3
HOXD11
DSCC1
GTF3C3
KPNA2
MTFR2
PGPEP1
EHBP1L1
ADA
TCF3
BRAP
ACAD10
CYB5B
NUP160
TSR2
HTR5A
GSN
RAB14
XKR7
TDRD7
IQSEC3
CPLX2
GBA
CAMTA1
ZNF555
NBPF1
CYB5R4
POLR2J3
PAXBP1
NME1-NME2
NME1
NDUFS7
CRNKL1
CFAP61
SLC35A4
APBB3
UTP25
ZNF77
ARCN1
TIPARP
KCTD18
NUP214
HEXA
RNF187
ZMPSTE24
CCDC107
STX16
VPS33A
TMEM248
YJU2
LAMP1
WASHC2A
QTRT1
POLR3H
HPCA
SCFD2
IBA57
WASHC5
NSMCE2
SSBP1
RAB37
BARHL1
ZEB1
SNAP25
DHDDS
RPS19
SLC39A3
TTLL4
TRMO
CELSR3
CALR
P4HA1
TTC26
METTL1
EEF1AKMT3
MARCHF4
PWWP2A
CCNG2
ITGB3BP
EFCAB7
FBRS
TDRKH
RBBP5
SOD2
NOL8
CENPP
CHGB
POLM
TMCO3
DCUN1D2
TPH2
FAM227B
DTWD1
IPO4
MIS18A
LARP1
RABL2B
TIGAR
HMGB1
WDR4
RTTN
ASMTL
EPHA10
SVOP
KNL1
CDK7
NFE2L2
BNIP3L
TIMM17A
SARS1
GSTA4
SLX1B
SLX1A
BOLA2
EIF1AD
BANF1
BOLA2B
NUP107
NEIL3
RPS29
KAT5
TRUB2
COQ4
N6AMT1
WTAP
COMMD2
CCDC59
NDUFS3
KBTBD4
HIBADH
MTF2
SEC31A
KLHL18
KIF9
PSME3
MAPK8IP2
SLC45A4
MRPL27
EME1
WDR36
INTS12
GSTCD
SF3A3
COMMD4
PI16
CASC3
SLC12A9
SUPT7L
SLC4A1AP
FBXO5
KIF18B
KIAA0895
H4C8
NUDT15
L1CAM
CBLL1
CSTF1
AURKA
BLOC1S1
THAP9
TXLNA
PAFAH2
FNBP1
CDK5RAP1
DHX40
ASF1A
MFSD1
CCDC88A
RAD51
LUC7L2
RTF2
RBM28
DNAJC5
OGDH
STX18
TSFM
EBAG9
VTA1
NMBR
BOLA2-SMG1P6
BCAS3
SMYD5
AP3S2
POLG
PEX3
ADAT2
MRPL40
HIRA
H4C15
H4C14
RFC1
RRP12
CRKL
USPL1
PRRC2B
KDM3A
LRRC59
TBRG4
TRAPPC6A
BLOC1S3
EDC3
ATR
NSUN4
USP54
SLC25A51
C16orf71
ANKS3
NOP16
HIGD2A
STAT3
ATL3
PDE4A
CCDC146
TRIAP1
GTF2H3
EIF2B1
C12orf66
STAM2
UNG
HUS1
YTHDF2
UBE2L3
NRL
DCAF11
PGAM5
UTP11
KLHL20
YARS1
PLEKHM3
TOP3B
DDX18
KIAA1586
CWC25
NOS3
MED23
DPY19L4
CFAP54
ZNF684
GOLGA7
TRMT6
MCM8
SSNA1
ANAPC2
POLR3B
CKAP2L
MRPL44
SUPV3L1
S100PBP
C8orf37
FBXL13
ARMC10
TSR3
GNPTG
ABCB8
HNRNPD
ATP6V0D1
CCDC86
MTIF2
GDAP1
CMSS1
NAGK
CCDC106
NUP35
TBC1D19
POLR3E
GTF3C4
DDX31
LTV1
INTS7
DTL
HDAC2
NOL6
SNRPE
SASS6
ITFG2
E2F6
TMEM208
LRRC29
VIM
SLC24A1
INTS14
LSM5
GTF2H4
C5orf51
RGL1
CEP135
UFD1
CDC45
CFAP298-TCP10L
CFAP298
SKA3
MRPL57
PIKFYVE
TTC27
PMVK
PGBD5
RGPD2
RGPD1
EBNA1BP2
CFAP57
QTRT2
CCDC191
ACVR1
TFB2M
OPA1
CNST
PFDN4
TMEM186
PMM2
COX16
TMEM41A
FMC1-LUC7L2
URB1
NAT10
PUS10
PEX13
NUP54
PIGU
TACO1
ARPC5
MCM7
AP4M1
PRMT2
ADPRS
P2RX6
GTPBP10
NDUFAF5
ESF1
ARFGEF2
GCDH
UTP3
EXOSC5
BCKDHA
GPATCH4
CENPS-CORT
CENPS
XRCC2
NLE1
WDR62
THAP8
THAP7
PHOSPHO2
CCDC173
TFB1M
YIF1A
GLRA1
FAM98B
CNOT4
PCIF1
CLK3
RABGAP1L
POLR3D
CCNL1
FAM228B
DHX37
FAM161A
ZC3H15
PUM3
NMNAT1
LZIC
SECISBP2
DNAJC25-GNG10
DNAJC25
SACM1L
CDC73
ATP5F1E
CDC25B
TOMM40
AIMP2
POC5
TEFM
FAM133B
AP1M1
KLHL32
DCLRE1B
AP4B1
RAB11A
MRPS23
RHEBL1
MRPL21
IGHMBP2
ULK4
PPIL2
PPP6R1
ZNF558
IREB2
TTC21B
TATDN3
NSL1
RABEP2
PNO1
RBKS
BABAM2
NCOA7
CCNB1
ING3
MRPS33
PAK1IP1
HEATR1
C6orf52
WDR46
PFDN6
SELENOH
TIGD1
EIF4E2
MMAA
DDX41
SMIM12
CYRIB
POM121
SIRT4
RPAP3
GATAD2A
BNIP1
PARL
NOL7
STAT1
CFAP299
ANLN
PMS2
USP2
RPS27L
INTS5
VPS26C
KIF15
KIAA1143
VPS35
MRPS18C
HELQ
TSN
ZAR1L
BRCA2
TBP
AAR2
MRPL48
GON4L
ACVR2A
CBWD5
DUS2
DDX28
SRSF11
DSTYK
MRPL1
AGBL3
TFIP11
PSMD3
ATAD2
C2orf42
ACOX3
CCT2
VPS29
RAD9B
ZNF165
TMEM222
KCTD9
CDCA2
TRMT61B
RRS1
TAF13
SYNJ1
NTAQ1
MRPL39
ANKRD12
RPS7
ARHGDIA
PFKM
SLC35B1
TAMM41
GFM1
PSMB1
IPO11
BLCAP
PIH1D2
NKAPD1
TMED1
ZBTB45
MITD1
USP30
EIF2B3
ESYT2
WDR11
DPF1
RUVBL1
DCAF10
PPIP5K2
GIN1
MIS18BP1
LRP2BP
ANKRD37
TMEM181
RLF
RBL1
RPL27
PTPN4
PCNA
CAP1
PRAME
SF3B6
ABCB6
FMC1
YBEY
MARCHF8
SUGCT
MPLKIP
NSA2
GFM2
C6orf89
BOD1
PGK1
ZSCAN22
MIA3
ZNF473
VRK3
SLC33A1
SMN2
SMN1
DNAJC11
AP5Z1
NOL10
SKIV2L
NELFE
INO80C
FAM207A
LRRC49
RAD54L
DDX21
KDM1A
RNF166
OXNAD1
DPH3
CTU2
HCFC2
GLT8D2
HBP1
G6PC3
XRN2
SHC1
KLHL12
GRN
VPS45
WDPCP
MDH1
INO80B
FBXW8
RPA2
KIF2C
KYAT1
AARS2
PALB2
H6PD
SNRPC
LSG1
RIOK1
CAGE1
RC3H2
BUB1B
WFDC3
POU2F1
DNTTIP1
RIMBP3B
IMP4
CCDC115
SNRPB2
NUP155
PARP2
SH2B1
FAM98A
SNX17
EIF2B4
CZIB
THAP10
RAD51AP1
LRRC37A3
C12orf4
ATG5
C16orf46
NOC3L
FBXO48
APLF
CAND1
IL1R1
CKS1B
SEC11A
TAF6L
HPS4
RAPGEF6
H4C3
DDIT4
SLC44A1
TCP11L2
NADK2
DYNC2I1
DUS3L
MAN2C1
RTN4
CDT1
NUP42
GALK2
GTF2H2C_2
CLUAP1
KDM2A
SMG7
SCNM1
LYSMD1
VPS11
PPM1B
CFAP20
RIMBP3C
UGGT1
BLM
SEC13
TXNDC9
REXO4
C12orf73
GTF2H2C
MOB4
PRMT5
SRRD
RNASEH1
STX6
DCTN5
BAG6
PLS1
PPIH
EPRS1
AMZ2
TBC1D30
LTN1
ADPGK
DCT
POMZP3
ACTR6
RAD54L2
DPH1
RPP40
EEF1AKNMT
ZNF721
PIGG
MCOLN1
RABGEF1
CBWD3
GPR158
CALM2
TTC3
COPS4
DIABLO
PC
EIF5B
NBN
ASXL1
TMEM259
JMJD1C
TMEM230
KPNB1
ABCF1
CYB561D1
IFT46
MTR
DNAJB12
TOR1A
NOTCH2NLC
ENDOV
COPS8
TRIT1
NUDT2
KIF24
SMARCD2
SLC35A5
ATG3
SMIM30
PHB2
CNTRL
CLSPN
EXOSC3
C2CD5
RBM45
LZTR1
TIMM10
MOK
BCAR3
ANKRD36C
CAST
S100A13
ASNS
DDX19A
TTI2
OIP5
NUSAP1
TRAPPC9
PLK3
UMAD1
KRR1
IGF2BP3
GNS
MRTO4
EMC1
DMAP1
USP16
POLR1B
ERMAP
RING1
ALG10
NUDCD3
LAMTOR5
RIOK3
NDUFAF4
KNTC1
COMMD1
POLR2J
SYT11
ATP6V1C1
NPPB
GFI1B
AIP
HSPA9
KAT6A
NOC4L
DDX51
MRPL3
BBS5
VARS1
SLF2
RECQL
GOLT1B
DIMT1
AJUBA
DST
PARPBP
NUP37
DDX49
COPE
MPHOSPH10
MCEE
FAM200B
DCP1A
CTCF
ANAPC5
MRPL4
BRIX1
TMEM9
PNPT1
SRGAP2C
RBM8A