ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2423402 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◣ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

PI16
OSCAR
NDUFA3
ARCN1
NPAS4
SARS1
TDRKH
RFX1
NUP214
NUCKS1
PRAME
ZNF335
IBA57
VPS37D
PSMD9
HPD
HTR5A
COASY
AHCY
UTP20
RRP15
SLC35A4
APBB3
SPATA2
PSME3
PWWP2A
RBM19
PDE4A
TRMT1
USP35
KCTD21
PPIL2
METTL1
EEF1AKMT3
CRKL
KXD1
SORBS1
NME1-NME2
NME1
DRG2
ZCCHC14
NAGPA
CACTIN
RBM48
PEX1
BRAP
ACAD10
UBE2O
AANAT
UBFD1
EARS2
NBPF1
WASHC2C
UTP25
TIGAR
CDK7
CHST12
QTRT1
CCDC22
GTF2H4
GBA
SLC29A3
CMIP
NOS3
FCHO1
TRUB2
COQ4
EFNA4
AKT2
CYB5R4
TFB1M
LZTR1
CYRIB
EHBP1L1
HPS4
SRRD
P2RX6
UBE2L3
POLM
ARHGEF1
SLC12A9
GRWD1
CDC42BPG
PAK4
SMTN
SWSAP1
MARCHF2
PAQR4
KDM3A
KLHL18
KIF9
ZC3HC1
IREB2
DDX21
ZDHHC24
ACTN3
POLR2J3
GDAP1
SGSM1
GSN
RAB14
ZDHHC12
SPHK2
RPL18
NR6A1
PDLIM7
FNBP1
MRPL27
EME1
LARS2
SHFL
SUMF1
CPPED1
GFI1B
TSC1
PRRT3
DNAJB12
IGF2BP3
TJP3
SMN2
SMN1
AJUBA
ADAMTS14
PIGBOS1
PIGB
IL1R1
GP1BB
GPATCH4
BNIP3L
TKT
WDR4
MRPL42
TOMM22
SUPT7L
SLC4A1AP
DDIT4
PIN1
DPF1
GON4L
SYT11
CNOT4
RHEBL1
ULK4
CRNKL1
CFAP61
PCIF1
NEU1
PLK3
UFD1
CDC45
SUPV3L1
SMYD5
ZNF771
RBM28
YJU2
WDR74
HSP90AB1
TTC27
TOMM40
IDI1
GPATCH3
CDC25B
ERAL1
MIS18A
GNL2
CYB561D1
SLC19A1
CALR
GATB
INTS7
DTL
ERMAP
PKD2L2
BMS1
MRPS28
NEK2
FXN
MFSD4B
DNAJC18
ZSWIM4
NRROS
POLR3D
THAP7
XKR7
H6PD
SH2B1
TUFM
SSBP1
CCT2
CKMT1A
GAL3ST4
SEC22C
SS18L2
ASAP3
TMEM199
POLDIP2
AP1M1
NAE1
ZCWPW1
MEPCE
PMVK
DHX37
ACVR2A
SETD1A
ZNF830
CCT6B
LOC100287896
LIPT2
RPL23A
RAB34
WDR46
PFDN6
NSUN4
C16orf71
ANKS3
IL1RL1
NUF2
FKBP8
RABEP2
CENPS-CORT
CENPS
C16orf46
RRS1
MAPK1
ZNF408
ARHGAP1
ATG16L1
EBNA1BP2
CFAP57
HDAC11
HEXA
ITGB3BP
EFCAB7
GSTA4
VARS1
RPS8
ELL
VILL
MRPL1
SDF2L1
VPS33A
CCNG2
HLA-E
NOL8
CENPP
ZNF165
ARL17B
ARL17A
LDLRAP1
ARMC2
CFAP299
CCDC97
EIF2D
DDX42
CCDC47
SYNJ2
RRP12
PIH1D2
NKAPD1
SLX1B
SLX1A
BOLA2
BOLA2B
BOLA2-SMG1P6
NACAD
RPS19
SNRPE
MTHFSD
CEP164
PAXBP1
TRMO
SIRT4
METTL14
ANAPC15
KAT5
SYNJ1
CRTC1
PPIH
EIF1AD
BANF1
TFPT
PRPF31
MRI1
PGPEP1
USP2
RPA2
SCG3
SLC38A10
MRPS18B
NTAN1
ECSIT
SNX8
SFSWAP
ZBTB21
CLPTM1
VPS50
HEPACAM2
SEMA4B
EPS15
SCFD2
TMEM248
BLOC1S1
CDK9
ANKRD13C
BRD7
NAT10
UBE2I
SNRPC
NOP16
HIGD2A
URB1
NOL7
RBM8A
CXorf58
RPSA
TRAF1
RPTOR
PPP1R13L
NOL6
MXD3
WFDC3
DNTTIP1
SRXN1
CZIB
SNUPN
ABCF1
AKR1A1
TCAF2
ZNF280A
FDX2
PDLIM1
STX2
DPP3
CFAP20
PHB2
DPH2
SPNS1
C12orf66
TIMM44
HMGCR
MOB1B
PARG
MYPOP
MRPS35
NUDT9
PATL1
EPOP
LTV1
KCNK5
PIGU
NLE1
LONP1
CATSPERD
PUS1
ZBTB32
QTRT2
CCDC191
DAXX
SCN9A
PAXX
FOXP4
SPATC1L
SRPK1
IFI16
SMIM30
MRPS14
SPC24
RAC1
FBXL13
ARMC10
YIF1A
ING3
VTA1
NMBR
SASS6
CLK3
BRMS1
EXOSC5
BCKDHA
RABEPK
UTP3
IPO4
KPNB1
PSMB7
ZSCAN21
IQSEC3
DHDDS
GFM1
TAF6L
CLASP2
SNIP1
SPOCD1
IFT140
CRAMP1
ZSWIM8
GAMT
AGO1
CASC3
RC3H2
TMEM191C
ABCA7
TBRG4
GTF3C4
DDX31
STX12
DHX9
PPT1
CFAP298-TCP10L
CFAP298
FAM72C
PWP1
ISOC2
MRPS33
NDUFAB1
HAGH
FAHD1
MAP3K3
RPUSD4
FAM118B
WDR18
PRRC2B
ADPRS
RIOK1
CAGE1
PRKCSH
CCDC151
DHX16
PPP6R3
DDAH2
COMMD4
MCM7
AP4M1
HCFC2
GLT8D2
LZTFL1
ZSCAN25
ESPL1
IMPA2
NUP155
SPIDR
SLC25A1
TOP3B
SPRING1
RNFT2
GTPBP3
PPP6R1
GTF2H5
TOMM6
PNPLA6
WASF2
TMEM191B
GTF3C5
UTP15
ANKRA2
ZNF555
INIP
ARAF
HAX1
ZCCHC7
MRPL24
ATP6V0E2
PSMD5
HPCA
IPO13
MED20
BYSL
WARS2
MED15
PRTN3
POLR2I
TBCB
KDM4A
TCIRG1
AIM2
POC5
HYOU1
N6AMT1
TMEM186
PMM2
LOC389831
PITPNA
TRIP4
DDX41
TRAPPC4
RPS25
SNRNP25
POLR3K
ZCCHC24
UNG
THADA
ATP5MC2
ATXN7L2
CAND1
ACTR6
SIRT5
OSGEP
APEX1
NLRX1
MKNK2
TBP
PSMB1
ZBTB45
CLTCL1
DEPDC5
MTBP
MRPL13
DMAC2
RHBDL1
TIPARP
PITHD1
ZSCAN31
LARP4
UBL5
CCRL2
CNOT6
PFDN5
DNAJB5
ANO8
KLHL20
SKIV2L
NELFE
ISG20
PAFAH2
TCP11L2
C17orf99
TTC26
ZC3H15
TIMM17A
BAG6
TSEN2
KANK2
NDUFS3
KBTBD4
ENDOV
ASNS
MRM1
RCCD1
SPATA24
MAGOH
CCNI
LARP1
DCT
VPS37C
CIZ1
TMEM242
LAMP1
ZSCAN22
PPA1
MKNK1
FABP6
TMEM87A
GANC
TCF3
WDR83OS
WDR83
C5orf51
TOR1A
CKMT1B
VWA7
SMG8
PSMA1
PPT2
SLC16A1
PRRT1
MAP1LC3C
FANCD2
NUP35
FAM13A
FBXO21
NOC2L
TMC6
EXO1
RPIA
PXMP4
POLR3B
MRPL45
RNPEP
WASHC5
NSMCE2
NUBP1
SUOX
SNPH
SLC35E2A
MTFR2
LUC7L2
FMC1-LUC7L2
FMC1
STK40
PAK1IP1
C6orf52
ALG1
HARS2
HARS1
HACD1
TPK1
TMCC2
ETS2
TMEM128
MEGF8
WDR36
DOLPP1
MYBBP1A
SLC12A4
ZNF74
HERC1
NNMT
SLC45A4
H4C3
NGLY1
OXSM
CDC37
TCTN2
IRF2BP1
SPOP
OXNAD1
DPH3
SLC38A1
RPS29
EXOSC3
AIP
TMEM9
OPA3
CLTB
CGB1
STAT3
GATAD2A
RYR1
PPWD1
CENPK
RBM42
PTPN4
BOD1
CNPY3
TRAPPC8
BRPF1
POMGNT1
DUS3L
MCRS1
INTS8
PARD6A
ACD
PPP5D1
CALM3
RBM47
C9orf16
SLC5A11
ABCB8
ATP6V0D1
INO80B
ODF2
CROCC
HEATR1
PPIL1
PPP1R7
PASK
CD2BP2
ACOT7
CASS4
RAP1GAP
CCDC116
ITFG2
SLC24A1
INTS14
CAPNS1
ACTR3C
FERMT3
SZT2
MED8
UQCR11
CPLX2
COMMD9
TMEM208
LRRC29
GTPBP10
TRAPPC9
SAP30BP
RECQL5
TTC31
CCDC142
CDC25C
CYLD
PLIN3
GTF2H3
EIF2B1
CWC25
TFB2M
CNST
GET3
POLR3A
PHKG2
TRIM5
ZNF2
GALNT11
ACOX3
PPFIA3
C19orf73
DLAT
MRPS15
DDX49
COPE
MPHOSPH10
MCEE
FAM156A
RSPH3
CRCP
FAM156B
SS18
ELP1
ABITRAM
TPP1
VIPR1
PGBD5
EIF3F
AIMP2
PMS2
CDC6
LYRM4
FARS2
TPR
ODR4
TTC38
NHP2
NME4
PUS10
PEX13
RBKS
BABAM2
MITD1
AP5Z1
RIMBP3
HACL1
BTD
GRK6
SLC27A4
H4C8
L1CAM
DUS2
DDX28
KHDRBS1
ISY1-RAB43
ISY1
LRIG2
ZNF107
PSMC5
FTSJ3
DDX18
CALM2
RIOK3
NUFIP1
GPALPP1
UBXN11
APOBEC3D
IQGAP3
EPHA10
USP54
ALKBH7
NASP
ITPA
GCDH
PNO1
CDIPT
ZKSCAN2
C22orf39
EHD1
MED24
FAM160B2
SOD2
WTAP
TMEM181
MDN1
ANKRD36B
EIF4EBP1
SLC25A16
ZNF510
UBE2V2
MIDN
G6PC3
IMP4
CCDC115
GORAB
SYMPK
SLC35B3
FOXA3
TELO2
C8orf37
PALB2
DCTN5
NEUROD4
MOCS3
DPM1
CENPN
TWNK
MRPL43
SMAP2
TMEM160
PLEKHO2
MYBPHL
CELSR3
FBXW8
PDE4C
NEURL2
CTSA
FANCI
PRR3
ZNF23
GNL1
PPARD
TMEM161A
PEX3
ADAT2
ATAD3A
OTUD6B
GAN
ELAPOR2
SOCS7
RITA1
DDX54
GDF11
SHC1
CKS1B
BBS5
RPF2
RBBP6
NCLN
ZNF561
CAD
CCL26
ZMPSTE24
SLC39A3
ATG5
E2F3
TFAM
CDK4
AP1G1
CRK
TLE2
KCTD9
CDCA2
FAM72A
SRGAP2
CEP162
KMT2D
POLR1G
STX4
MFSD14B
CCNB1IP1
CCDC86
B3GALNT2
KIAA0319L
NCDN
CCSER2
ADAMTSL5
TSFM
MOK
PCNP
CDK5RAP3
DGCR8
PTCD2
MRPS27
SRD5A1
CATSPERG
SLC8A2
OR4F21
CRBN
TRIAP1
ATAD2
EMC4
MARF1
LAMTOR5
PRPSAP1
PPIG
MAD2L1BP
RPL37
HSD17B11
RUVBL2
GYS1
NUDT8
SPACA6
CMPK2
DNAJC25-GNG10
DNAJC25
YIPF2
TIMM29
HPS5
GTF2H1
MAN2A2
RPUSD2
SLC25A53
CTU1
DNAJC14
BLVRB
CCNL2
PARPBP
NUP37
UBN2
TADA2B
CCDC96
MRPS30
TTC16
PTRH1
FAM234A
WSCD2
TIMM9
KIAA0586
MVK
HSPBP1
WDR55
RTL10
GNB1L
THUMPD3
ZNF598
UTP6
CFAP54
E2F6
AAAS
RMND1
ARMT1
CYP51A1
LCMT2
ADAL
PRELID2
SLC4A1
KIF15
KIAA1143
TUT1
RXYLT1
PSRC1
RAB11B
NBEAL2
ACSL1
PLSCR2
ICAM1
P4HA1
SLC35B1
PIK3R3
B3GAT3
ABCF3
SLC38A7
MCCC2
AQP8
CBWD5
CBWD3
MMUT
CENPQ
PPP1R11
LSM2
INO80
MRPL33
GOSR1
ZNF202
PPIB
MAD1L1
TXN
TMEM35B
ZFPL1
CDCA5
BNIP1
AARS2
TNPO3
ZNF593
C1orf232
MPHOSPH6
TBX19
DNTTIP2
SREBF2
ARNT
PSMD14
TOM1L2
DRC3
WDR91
DGCR6L
NR2C2AP
MGA
TMPRSS9
ELAVL3
NFE2L2
VPS35
RUVBL1
THEM6
ST6GAL1
ITSN1
GABPB2
CRYZL1
EXOG
C12orf43
TENT2
RPGR
PRKACA
RTL8C
UBE3B
METTL2B
UBE2D3
ATG101
IFT172
VPS26B
NCAPD3
MAX
FBXO11
HOOK2
FAM86B1