ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4909431 | HCC3153
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◣ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
ENOSF1
PGK1
SGSM1
IQSEC3
XKR7
NOTCH2NLC
HTR5A
VIM
CYB5R4
TAS1R1
NOL9
CRBN
C8orf33
ALKBH3
SPOP
RFX1
ZCCHC14
COPS7B
NOTCH2NLA
LY6K
OAZ3
MRPL9
TDRD7
GGTLC2
MTMR2
POLR2J3
GBA
PAXBP1
EIF2D
SCRT1
CYRIB
WASHC2C
H4C12
NOTCH2NLB
CFAP45
TFAP2A
HIVEP1
RBM48
PEX1
SSBP1
SUMF1
VPS50
HEPACAM2
CPSF1
LAMP1
WASHC5
NSMCE2
ADAMTS17
NDUFS7
TMED1
MRPL16
TEFM
IGSF9
MARCHF4
COASY
MTRNR2L8
SSNA1
ANAPC2
DNAJB12
HES3
TOP3B
GTF2H4
MTBP
MRPL13
PPP1R7
PASK
HDAC2
RHNO1
FOXM1
SNAP25
GPR158
CCN2
NDUFS3
KBTBD4
DNAJC11
RNF130
JRK
FAM83A
ZNF408
ARHGAP1
AHCY
SFSWAP
SELENOH
SH3BP4
COL12A1
NBN
RAB37
ITGB2
ZNF555
SCRT2
PSMF1
RCOR3
INTS12
GSTCD
NEURL2
CTSA
B4GALT7
PUM3
TMEM222
ATL3
PEX19
RANBP6
KLHL32
NDUFAF4
AGK
NOTCH2
MRPL44
MRPL39
AURKAIP1
DRG2
TAGLN2
TUBB2A
PGBD5
SRI
CDK5RAP1
TMEM41A
KCNK12
CPLX2
ATG16L1
ZNF783
H4C15
H4C14
H4C11
HRH1
ZNF292
PIH1D2
NKAPD1
RRP15
ASMTL
TATDN3
NSL1
TMEM203
NDOR1
POLR2J2
ZNF16
ATF3
VPS45
TIMM23
JAK2
SEC13
COPS8
RIOK1
CAGE1
LRRC47
RAB22A
UBE2Q1
SLC35E2A
NDUFA9
AKAP3
STX16
SSRP1
MTF2
ADPGK
TRAPPC9
NUF2
VIRMA
NEK2
ATG14
LMAN2
TRIM67
SPATA2
AXL
CHD1L
PRKAB2
HAGH
FAHD1
ATG7
PPM1B
NKAP
CDC14B
TASOR
NEBL
SNX19
GSN
RAB14
MTRNR2L2
CAMTA1
NBPF1
UTP20
ZNF335
NME1-NME2
NME1
CRNKL1
CFAP61
SLC35A4
APBB3
KXD1
FANCD2
UTP25
NAGPA
ZNF77
ARCN1
TIPARP
KCTD18
NUP214
HEXA
RNF187
ZMPSTE24
TRMT1
PSMD9
HPD
CCDC107
TMEM242
VPS33A
TMEM248
YJU2
WASHC2A
RBM19
QTRT1
TRIP4
PPT1
POLR3H
SPNS1
EXO1
WDR74
HPCA
SCFD2
IBA57
BARHL1
ZEB1
DHDDS
RPS19
SLC39A3
TTLL4
USP35
KCTD21
TRMO
CELSR3
CALR
P4HA1
UBFD1
EARS2
ZCCHC7
TTC26
METTL1
EEF1AKMT3
MTFR2
SMG8
IDH3B
PWWP2A
CCNG2
ITGB3BP
EFCAB7
BIRC5
FBRS
IQGAP3
TDRKH
RBBP5
SOD2
NOL8
CENPP
OSCAR
NDUFA3
ZCWPW1
MEPCE
CHGB
POLM
TMCO3
DCUN1D2
TPH2
FAM227B
DTWD1
IPO4
MIS18A
LARP1
RABL2B
TIGAR
HMGB1
WDR4
RTTN
EPHA10
SVOP
KNL1
GATB
CDK7
NFE2L2
BNIP3L
TIMM17A
SARS1
GSTA4
SLX1B
SLX1A
BOLA2
EIF1AD
BANF1
BOLA2B
NUP107
NEIL3
RPS29
KAT5
TRUB2
COQ4
N6AMT1
WTAP
COMMD2
CCDC59
POLR3F
DZANK1
HIBADH
SEC31A
KLHL18
KIF9
PSME3
MAPK8IP2
SLC45A4
MRPL27
EME1
WDR36
SF3A3
COMMD4
PI16
CASC3
SLC12A9
CPPED1
ZFPL1
CDCA5
MRM3
GLOD4
SUPT7L
SLC4A1AP
FBXO5
KIF18B
KIAA0895
H4C8
NUDT15
L1CAM
CBLL1
CSTF1
AURKA
BLOC1S1
THAP9
TXLNA
PAFAH2
COMMD9
CCNA2
FNBP1
NCAPH
GTF3C3
DHX40
ASF1A
MFSD1
CCDC88A
RAD51
LUC7L2
RTF2
RBM28
DNAJC5
OGDH
STX18
TSFM
EBAG9
GPATCH3
VTA1
NMBR
TOMM22
BOLA2-SMG1P6
BCAS3
SMYD5
AP3S2
TMEM199
POLDIP2
POLG
PEX3
ADAT2
MRPL40
HIRA
RFC1
RRP12
CRKL
USPL1
PRRC2B
KDM3A
LRRC59
TBRG4
TRAPPC6A
BLOC1S3
KIF20A
BRD8
EDC3
ATR
NSUN4
USP54
SLC25A51
C16orf71
ANKS3
NOP16
HIGD2A
STAT3
PDE4A
CCDC146
TRIAP1
GTF2H3
EIF2B1
C12orf66
STAM2
UNG
HUS1
YTHDF2
UBE2L3
NRL
DCAF11
PGAM5
UTP11
KLHL20
YARS1
PLEKHM3
DDX18
UBE2O
AANAT
KIAA1586
CWC25
NOS3
MED23
DPY19L4
CFAP54
ZNF684
GOLGA7
TRMT6
MCM8
POLR3B
UBE3B
CKAP2L
GRWD1
SUPV3L1
S100PBP
C8orf37
FBXL13
ARMC10
TSR3
GNPTG
ABCB8
HNRNPD
ATP6V0D1
CCDC86
MTIF2
ZC3HC1
GDAP1
VPS37D
CMSS1
NAGK
CCDC106
MRPL45
NUP35
TBC1D19
POLR3E
GTF3C4
DDX31
LTV1
INTS7
DTL
SAP30BP
RECQL5
TTC31
ESCO2
NOL6
SNRPE
SASS6
ITFG2
FANCI
E2F6
TMEM208
LRRC29
SGO1
SLC24A1
INTS14
LSM5
DZIP3
CIP2A
C5orf51
RGL1
CEP135
ZGRF1
LARP7
UFD1
CDC45
CFAP298-TCP10L
CFAP298
SKA3
MRPL57
PIKFYVE
TTC27
PMVK
RGPD2
RGPD1
EBNA1BP2
CFAP57
QTRT2
CCDC191
ACVR1
TFB2M
OPA1
CNST
PFDN4
TMEM186
PMM2
PPWD1
CENPK
CACTIN
COX16
SKA1
FMC1-LUC7L2
URB1
NAT10
PUS10
PEX13
NUP54
RPTOR
PRCP
PIGU
RBM42
TACO1
ZNF830
CCT6B
ARPC5
FAM72C
MCM7
AP4M1
PRMT2
ADPRS
P2RX6
GTPBP10
NDUFAF5
ESF1
ARFGEF2
GCDH
UTP3
EXOSC5
BCKDHA
DDIAS
GPATCH4
CENPS-CORT
CENPS
XRCC2
NLE1
NUCKS1
WDR62
THAP8
THAP7
PHOSPHO2
CCDC173
TFB1M
YIF1A
GLRA1
FAM98B
CNOT4
PCIF1
NR6A1
CLK3
TFPT
PRPF31
RABGAP1L
POLR3D
CCNL1
FAM228B
DHX37
FAM161A
ZC3H15
NMNAT1
LZIC
SECISBP2
EIF3F
DNAJC25-GNG10
DNAJC25
SACM1L
FXN
CDC73
ATP5F1E
CDC25B
TOMM40
AIMP2
POC5
FAM133B
AP1M1
DSCC1
DCLRE1B
AP4B1
RAB11A
MRPS23
RHEBL1
MRPL21
IGHMBP2
ULK4
PPIL2
PPP6R1
ZNF558
IREB2
TTC21B
RABEP2
SNX16
PNO1
RBKS
MRPS15
BABAM2
NCOA7
CCNB1
ING3
MRPS33
PAK1IP1
HEATR1
C6orf52
WDR46
PFDN6
TIGD1
EIF4E2
MMAA
DDX41
PBK
SMIM12
POM121
SIRT4
RPAP3
GATAD2A
BNIP1
CENPF
PARL
CCDC142
NOL7
STAT1
CFAP299
ANLN
PMS2
MRPS35
USP2
RPS27L
INTS5
VPS26C
KIF15
KIAA1143
VPS35
MRPS18C
HELQ
TSN
ZAR1L
BRCA2
TBP
AAR2
MRPL48
GON4L
ACVR2A
CBWD5
DUS2
DDX28
SRSF11
DSTYK
MRPL1
AGBL3
TFIP11
PSMD3
ATAD2
C2orf42
ACOX3
CCT2
VPS29
RAD9B
ZNF165
KCTD9
CDCA2
TRMT61B
RRS1
TAF13
SYNJ1
NTAQ1
ANKRD12
RPS7
GTF3C5
ARHGDIA
TOP3A
SMCR8
PFKM
SLC35B1
TAMM41
GFM1
PSMB1
IPO11
AURKB
BLCAP
ZBTB45
MITD1
USP30
EIF2B3
ESYT2
WDR11
DPF1
RUVBL1
DCAF10
PPIP5K2
GIN1
MIS18BP1
LRP2BP
ANKRD37
TMEM181
RLF
RBL1
RPL27
PTPN4
PCNA
CAP1
PRAME
SF3B6
ABCB6
FMC1
SWSAP1
YBEY
MARCHF8
SUGCT
MPLKIP
NSA2
GFM2
C6orf89
BOD1
ZSCAN22
MIA3
ZNF473
VRK3
SLC33A1
SMN2
SMN1
TROAP
AP5Z1
NOL10
SKIV2L
NELFE
INO80C
FAM207A
LRRC49
RAD54L
DDX21
KDM1A
CDC6
RNF166
OXNAD1
DPH3
CTU2
HCFC2
GLT8D2
RRM2
HBP1
G6PC3
XRN2
SHC1
KLHL12
GRN
TICRR
WDPCP
MDH1
INO80B
FBXW8
RPA2
TIMM9
KIF2C
KIAA0586
KYAT1
AARS2
PALB2
H6PD
SNRPC
LSG1
RC3H2
BUB1B
WFDC3
POU2F1
DNTTIP1
RIMBP3B
IMP4
CCDC115
SNRPB2
NUP155
PARP2
PIGBOS1
PIGB
SH2B1
FAM98A
SNX17
EIF2B4
CZIB
THAP10
RAD51AP1
LRRC37A3
C12orf4
ATG5
C16orf46
NOC3L
SGO2
FBXO48
APLF
CAND1
IL1R1
CKS1B
SEC11A
TTK
TAF6L
HPS4
RAPGEF6
H4C3
DDIT4
SLC44A1
TCP11L2
NADK2
DYNC2I1
DUS3L
MAN2C1
RTN4
CDT1
NUP42
GALK2
GTF2H2C_2
CLUAP1
KDM2A
SMG7
SCNM1
LYSMD1
VPS11
CFAP20
RIMBP3C
UGGT1
BLM
TXNDC9
REXO4
C12orf73
GTF2H2C
MOB4
DMAC2
PRMT5
SRRD
RNASEH1
EIF3H
STX6
DCTN5
BAG6
PLS1
SPHK2
PPIH
EPRS1
AMZ2
TBC1D30
LTN1
DCT
POMZP3
ACTR6
TSEN54
CASKIN2
RAD54L2
DPH1
RPP40
EEF1AKNMT
ZNF721
PIGG
MCOLN1
RABGEF1
CBWD3
CALM2
TTC3
COPS4
DIABLO
PC
EIF5B
ASXL1
TMEM259
JMJD1C
TMEM230
KPNB1
ABCF1
CYB561D1
IFT46
MTR
TOR1A
ENDOV
TRIT1
NUDT2
KIF24
SMARCD2
U2SURP
SLC35A5
GET3
ATG3
SMIM30
PHB2
CNTRL
CLSPN
EXOSC3
C2CD5
RBM45
LZTR1
TIMM10
MOK
BCAR3
ANKRD36C
CAST
S100A13
ASNS
DDX19A
TTI2
OIP5
NUSAP1
PLK3
UMAD1
KRR1
IGF2BP3
SHCBP1
GNS
MRTO4
EMC1
DMAP1
USP16
POLR1B
ERMAP
RING1
ALG10
NUDCD3
LAMTOR5
RIOK3
KNTC1
COMMD1
POLR2J
SYT11
ATP6V1C1
NPPB
GFI1B
AIP
HSPA9
KAT6A
NOC4L
DDX51
MRPL3
BBS5
VARS1
SLF2
RECQL
GOLT1B
TMEM101
DIMT1
AJUBA
DST
PARPBP
NUP37
DDX49
COPE
MPHOSPH10
MCEE
FAM200B
DCP1A
CTCF
ANAPC5
MRPL4
BRIX1
TMEM9
PNPT1
SRGAP2C
RBM8A
PTRHD1
CENPO
RBIS
MVK
THADA
HAX1
MCM3AP
DPP8
FOXJ3
SIRT5
FAM117B
PCNP
USP32
ZDHHC12
TBL3
NEUROD4
PNPLA8
THEM6
GRPEL2
TUT1
PRPSAP1
MTDH
ACBD6
DPP3
SLC25A32
DCAF13
PCM1
DNPEP
APRT
B3GALNT2
PPAN-P2RY11
PPAN
BMS1
POLE3
CNPY3
C9orf43
RAD9A
FRA10AC1
FAM185A
CERCAM
MRPS28
ABT1
SEPTIN9
DNTTIP2
ECSIT
TM9SF4
FBXW9
ZNF383
CCDC77
TEAD1