ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9779520 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◣ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

PPT1
ZMPSTE24
ZNF684
CAP1
SKA1
PPIE
TRIT1
EXO5
UTP20
RLF
RABL2B
MRPL45
HPCAL4
TRMT1
IQGAP3
NT5C1A
CDK7
RPS29
MYCL
SHCBP1
SSH2
CRNKL1
CFAP61
RAD51
QTRT1
NUF2
FAM161A
MFSD2A
TRAPPC6A
BLOC1S3
DHX37
POLR3D
NCAPH
UTP25
C12orf66
DIAPH3
BMP8B
WDR7
ATP6V0D1
MOK
ADAT1
PSME3
PAX9
GRWD1
RTTN
MTFR2
HSPA12A
ENO4
SEMA3C
SPACA1
PMAIP1
LAMP1
TRMT61A
RRP15
C16orf71
ANKS3
HEATR1
GPATCH4
BIRC5
DZIP3
CIP2A
WDR4
ZNF24
AP1S1
NBPF1
TIMM21
FBXO15
NEURL2
CTSA
SLF2
ATP5F1A
CDC20
CFAP299
CORO2A
BLM
CCDC102B
TMX3
PUM3
EXO1
ACVR1
PHB2
RIOK3
FANCI
CDC16
ZCCHC7
SRCAP
LOC730183
FBXO5
UFD1
CDC45
KIF23
URB1
RBKS
BABAM2
SCFD2
KPNA2
UNG
ZGRF1
LARP7
KIF2C
SMYD5
PNO1
DPH1
COMMD6
UCHL3
UTP4
DERPC
CHTF8
METTL11B
SLX1B
SLX1A
BOLA2
BOLA2B
BOLA2-SMG1P6
TMEM241
AURKB
TICRR
MIS18A
APRT
DMAC1
KATNAL2
LYRM4
FARS2
WWP2
TTK
AEN
PLEKHD1
RBM19
FAM200B
GTF3C4
DDX31
EDC3
FAM72C
SRGAP2B
FAM72D
CKAP2L
TRAPPC8
VPS4B
METTL1
EEF1AKMT3
NOL6
TOM1
HDHD2
POU2F1
WDR26
ZNF77
NEK2
TTC27
TFB2M
CNST
CCT2
NPC1
CFAP53
SLC25A17
CCNA2
CENPS-CORT
CENPS
PRR3
GNL1
FBXW9
TAF13
MZT1
BORA
RPRD1A
NUDT2
KIF24
ARMC2
AIP
RBBP8
CKS2
USP37
CNOT9
RNF125
VPS33A
CCNG2
COMMD4
BLOC1S1
TMEM186
PMM2
TRAPPC2L
GALNS
ATL3
LRRC49
THAP10
NKX2-1
CEP135
MRPL1
HEXA
DSEL
COL9A2
USP2
MYDGF
IKBKB
TAF4B
KIAA0895
ANLN
POLR2J2
GBA
FAAP24
CEP89
MRPS18B
KAT5
PIK3C3
TIMELESS
NTPCR
MRM3
GLOD4
KIF22
AP1B1
MRPS33
MCM10
TBC1D4
WASHC5
NSMCE2
STAM2
CCDC86
RPS3A
DDX5
PEX19
PCCA
NTAQ1
CLSPN
STK36
RNF25
ZNF558
MCRS1
RETNLB
TROAP
TIMM9
KIAA0586
ZNF408
ARHGAP1
CYB5R4
E2F3
VPS41
SH3KBP1
BCAS3
FAM183A
SLC38A8
AIMP2
CCNB1
PMS2
RNF138
CYP21A2
PMVK
WDR61
POLR1B
DPH2
TMCO3
DCUN1D2
ADPGK
SLC39A6
CDK18
ZFPL1
CDCA5
CLK3
RBL2
TOMM70
LNP1
NKX2-8
NAT10
SLC12A9
C16orf46
ZNF778
ADSL
RFX5
ESCO2
QTRT2
CCDC191
POLQ
VPS26B
NCAPD3
RFWD3
HUS1
SUGP2
ARMC6
NME7
BLZF1
RMC1
PDP2
RPS27L
INTS9
HMBOX1
TRIP4
DDX19A
METTL18
C1orf112
PTPRD
SPG7
MRPL27
EME1
SHC1
CKS1B
CLYBL
FAM72A
SRGAP2
MAK16
TBC1D16
CCDC40
SECISBP2
HROB
SLC25A6
PBK
SMC2
STK11IP
MBD1
C6orf89
NOC3L
WDR74
NOL10
TAF6L
PTPN4
VPS11
CENPH
CDC25B
SRGAP2C
FAM72B
ING5
SFXN2
ARL3
UPF3A
CLN5
KIF18B
SPG21
HSPBP1
WDR3
GDAP2
PIBF1
DIS3
RPTOR
DLGAP5
FAM161B
COQ6
RPUSD4
FAM118B
ZBTB37
ARL13B
TAF1A
CCDC146
TFIP11
DHODH
ASPM
NOB1
WDR18
USP35
KCTD21
GLE1
VTI1B
DIRAS2
EBNA1BP2
CFAP57
CHRNA9
PSEN2
MYBBP1A
PSMD9
HPD
ERCC5
LEMD3
EFCAB6
MSH3
DHFR
NUP35
PIF1
GPX4
RNF187
PWP1
ZNF594
SPNS1
SGO2
MCOLN1
GEMIN6
KNL1
SF3A3
MRPS28
MPND
HASPIN
ZNF598
PIPOX
CCDC39
SCRN3
CIR1
TXNL4B
DHX38
F11R
TBC1D30
GNS
UQCRC2
ESPL1
COMMD5
RPL17-C18orf32
RPL17
MFSD1
UTP11
IPO11
THADA
RCL1
FKBP1A
KIF14
RPUSD2
LHFPL1
RPP40
PACRGL
CENPN
LACTB
RFC1
RIOK1
CAGE1
PPIH
GTSE1
PPIB
CXXC1
RRP12
SASS6
PRPF38A
ORC1
PISD
GAR1
TTC23L
POLN
HAUS3
DHX40
CASP7
MTR
MRPL24
TM9SF1
CNDP2
ERCC3
IER3IP1
RGS8
TRUB2
COQ4
TXLNA
TMEM208
LRRC29
VAC14
DYRK1B
STYXL1
NOP9
DHRS1
TAF1C
DYRK3
ZNF396
PRCP
ADPRS
DDIAS
WDPCP
MDH1
SMG5
MND1
ISG20
SP4
TSTD1
DHDDS
GLT8D1
YIPF3
POLR1C
ZSCAN30
CHST12
SPCS1
SRD5A1
ACADM
KLHDC4
MCM5
PIGU
RRS1
TOP3A
SMCR8
SWSAP1
TWNK
MRPL43
DGKB
POP7
MELK
SMAD2
IREB2
RNF166
CTU2
SCNM1
LYSMD1
ZNF202
NEMP1
COQ9
CIAPIN1
TSACC
CCT3
PDE11A
SPATA4
PDCD2L
SLC35A4
APBB3
WDHD1
SOCS4
RPF2
RANBP6
GATB
CNPY3
TSC22D4
PDE8A
ANAPC7
NPL
CARS2
AP2S1
MAP11
CEP295
C21orf58
TMEM9B
PCNT
SNRPA
C19orf54
SSR2
EHMT1
CCNB2
MDN1
ARFGAP2
UBE2C
RNH1
ENOX2
MBIP
ZNF587
FAM98B
TTF2
CDIP1
RNF40
CCDC189
INPP5K
BAZ1B
LMNA
ATP6V0A1
MAPRE2
FAM234B
CRELD2
ALG12
MEX3A
IPO4
NUP107
MED20
BYSL
RAB36
TMEM260
TRMT6
MCM8
WDR46
PFDN6
DIMT1
NIP7
COG8
SENP7
KXD1
NSFL1C
INO80
DNMT3B
SOCS3
ST8SIA3
ACOX3
SLF1
KIAA0825
TMEM234
EIF3I
DAD1
ZSCAN29
TUBGCP4
DPP4
POLR2J3
WDR62
THAP8
FBXW8
PRIM2
GFUS
ABHD3
GPATCH3
E2F6
XRN2
PIGO
SNX19
SF3B4
PARP9
DTX3L
FBXO43
UBE2Q1
ACTR6
VPS9D1
FCF1
AREL1
TMED5
CCDC18
MRPL12
NCKAP5L
EXOSC5
BCKDHA
SERP1
EIF2A
RSPH3
SLC35F5
SLC7A6OS
PRMT7
GINS3
SZT2
MED8
DOLPP1
NUDT1
MRM2
ORC2
ACYP1
C18orf32
ZWILCH
RPL4
PFDN2
NIT1
RCCD1
SMYD3
ZC2HC1C
SCAMP3
CEP128
SDE2
LRP2BP
ANKRD37
C18orf21
SLC35A3
CFDP1
SLC35B2
ARL2BP
DENR
GOLPH3L
NAGPA
INO80C
CDK5RAP3
CEP162
GNL2
NCAPH2
LMF2
ZNF33A
TPGS2
MRM1
GPR107
CHAC1
RAVER1
LSM1
BAG4
FBL
VPS35
GPN1
CCDC121
TK1
BRCA1
EIF3D
PDF
RTF1
POLD1
VPS45
BAG6
S100A13
PPIL1
CHTOP
CUL4A
SF3A1
CCDC157
TTC5
RASAL2
RIT1
IBA57
COMMD9
COG2
VPS72
PLK4
SLC38A7
PTCD2
MRPS27
WDR5B
EIF2AK1
PYGO2
LOC101928120
SPATA2
LTV1
ZNF721
PIGG
PTRHD1
CENPO
DDX19B
MUL1
DYNLL1
CEP126
TIGD4
ARFIP1
SPATA33
DNAH14
MVD
DPY19L4
ZNF473
VRK3
ZCCHC14
NOLC1
TTI1
RPRD1B
RBM7
C11orf71
NUDT9
DBF4B
MTHFR
CLCN6
NCAPG
EXOC1
SMIM5
HNRNPH2
PPIL3
NIF3L1
SPAG1
OGDH
GTF2H3
EIF2B1
KLHL20
DUS2
DDX28
GINS1
ABCA3
CFAP206
LAP3
GCDH
MRPS18C
HELQ
EXOSC3
POLD3
THAP5
DNAJB9
CYB5A
USP36
ZZEF1
CYB5D2
ASB8
NASP
PSMB4
H3C15
H3C14
NCOA7
STAT1
NOM1
SMC4
IFT80
TIPRL
SRP54
CEP43
VPS8
ASH1L
FUBP3
LMAN1
ZNF701
MED25
NAGK
EIF2B3
RECQL
GOLT1B
URB2
TAF5L
DHX33
RAB5B
SPTY2D1
SNAP47
JMJD4
HJURP
SLC25A44
POLA2
CKLF-CMTM1
CKLF
EIF4A1
MCF2L
CFAP54
BUB1B
ADAR
TIPIN
TXNL4A
RBFA
IGSF9
ZBBX
TMEM147
KLF5
RAB23
LAMA3
LTN1
PPAN-P2RY11
PPAN
AAAS
STOML2
RHNO1
FOXM1
CNPY2
IQCG
COA3
CNTD1
MXD3
KLC2
ARIH1
FANCM
LMLN
SLC14A1
ZCWPW1
MEPCE
CENPF
LRRC57
HAUS2
ZNF507
IPO9
MAD2L1
KMT2D
PIGW
MYO19
COX19
NF2
BOLA1
EIF2D
CCDC59
CDC73
RBL1
INO80B
NOC4L
DDX51
PPT2
NDFIP2
TONSL
GRHL3
ZBTB7C
EHD3
CAPN14
NEIL3
NDUFAF5
ESF1
CDC6
PARPBP
NUP37
NDUFB3
FAM126B
SAXO2
EFL1
CHCHD3
XPO5
POLH
SNRPD2
QPCTL
RSRC1
MEA1
KLHDC3
IFT57
CENPA
ZNF669
HYKK
ARMCX5-GPRASP2
CIART
ARMCX5
POLR3H
TMEM41A
CBWD5
CBWD3
CBWD6
CWF19L1
SETD4
MRI1
VPS53
TMEM231
TEPSIN
NDUFAF8
E2F2
USP21
EML5
NUP214
CALR
MIA3
BRAP
ACAD10
PELP1
L3HYPDH
JKAMP
AKR1A1
EDC4
RANGAP1
SLC35C2
MRE11
ANKRD49
DPH5
SLC30A5
BLOC1S2
POLR2C
MAD1L1
ZNF319
USB1
ZNF223
BLMH
ACAA2
LAGE3
VPS26C
KCTD9
CDCA2
CDT1
EEF1AKNMT
USP32
ECSIT
VPS37A
CNOT7
PIMREG
POLL
DPCD
ZNF133
STRIP1
ABCB10
PLK1
ZNF783
MRPL42
SPC25
TRIM46
KRTCAP2
TCTN2
NDUFAF2
ERCC8
MFSD5
WDR90
CHM
SHPK
CTNS
WRN
WEE1
EXOSC10
PURG
GTF3C3
VTA1
NMBR
SMIM12
ATAD2
C2orf42
RRM2
GTF2H2C_2
GTF2H2C
VIRMA
DMAP1
BBS5
TOMM5
NEU1
POLE4
LOC389831
ADCK1
CSNK1G1
KCTD7
SPG11
BCL2L13
NTMT1
UGGT2
TMEM183A
NUP93
ZPR1
TTLL4
SNRPE
IMP4
CCDC115
ATP6V1C1
SETDB1
CHEK1
PCID2
MALSU1
DNMT1
PGS1
HSP90AA1
PIP4K2C
C18orf25
WDR20
ADPRHL1
FBXO25
SLC25A14
PDE4A
MITD1
AP5Z1
DEPDC1
CDC37
FAM174A
C22orf39
CCT5
ATPSCKMT
DYNC2I1
DUS3L
SMARCD2
RBM8A
DARS1
SPRTN
EXOC8
HSPBAP1
CELF6
DUS1L
VPS18
RBM34
SLC49A4
RPLP1
USP20
C9orf78
DTX2
FBN1
FAM163B
SIGLEC15
TAS2R8
MRPS15
MRTO4
EMC1
ATF2
TF
DHCR7
SUPT3H