ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567327 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◣ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
USP31
RAD51AP2
METTL3
CCDC88A
NSA2
GFM2
HSPE1-MOB4
HSPE1
HSPD1
MTRNR2L8
CCNT2
GTF2H4
CRH
C7orf25
LSM6
LCORL
DARS2
CENPL
TANK
NBPF1
MED23
MRPL48
YIPF5
KCTD16
DLAT
EIF2D
ATL1
ATE1
MRPS30
EID1
MRPL28
PLK4
COX18
EFHD1
NBN
KCNJ2
ITGB3BP
EFCAB7
FANCF
TMEM71
PHF20L1
STK17A
RNPC3
PHF3
SAXO1
RRAGA
VRK2
MRPL42
LYNX1-SLURP2
LYNX1
POLR2M
TTC21B
GPR89A
COG6
FRA10AC1
PIP4P2
UFM1
SPEF2
ZNF250
LDHB
CLN3
MTIF3
NFE2L2
NDUFAF1
TMA16
FEM1C
DTWD2
CEP85L
PHIP
RPGRIP1L
FTO
AFF1
AGBL3
ANAPC10
ABCE1
MFAP3
FAM114A2
SCOC
IKZF2
BBS10
AP3B2
ABCD3
IL18R1
DCP1A
CAP2
ZNF32
SPATA17
GPATCH2
USP30
MPHOSPH6
WDR3
GDAP2
COBLL1
BET1
MRPL10
LRRC46
FOXO3B
C8orf88
WDR35
CMTM6
CETN3
SLC30A9
UFL1
NOTCH2NLC
ZNF891
ZNF10
DBR1
TPR
ORC4
ODR4
MBD5
KRR1
MTF2
CDK8
NSFL1C
PDCD2
CC2D2B
LCA5
TCAF1
CNOT4
CLDN12
ATR
SUGCT
MPLKIP
H4C12
IRAK1BP1
WDPCP
MDH1
ZNF780A
REL
ZNF93
PDCD6IP
PFKM
SELENOT
CCDC178
ZNF214
NLRP14
DHRS7
FBXW4
DERL1
ZCCHC7
TMEM106B
BLOC1S6
DECR1
KLHL20
TMEM260
CTR9
SNX15
DSCC1
SULT6B1
CEBPZOS
FAM227B
DTWD1
PAXBP1
ACER3
TSN
C12orf66
CSTF2T
USP15
CCDC59
GINS3
DNAH2
HEMK1
PTX3
FAM126A
DHX36
SLC25A40
DBF4
C10orf88
USP45
NUDT4B
SNRPD1
LAMA2
MRPL39
DNAJC3
WDR11
GLIPR1L2
GAP43
SLC39A10
RNF146
NOTCH2NLA
DOP1A
SNRPF
MRPS28
NRAS
GNPDA2
ITPRID2
RICTOR
GHR
CDKN2B
DDX60
GLCE
HLCS
NCOA7
CREBZF
ZNF670
HEPACAM2
MRPL44
KDM8
SOAT1
PUS10
PEX13
VPS50
RBIS
TNPO1
GTF2B
NOTCH2
PRPF38B
PDGFD
RPSA
VPS41
GPC6
BAZ2B
TAP2
FNTB
ASCC3
MAP9
PINX1
CCT2
SYNGR4
IFTAP
MPHOSPH10
MCEE
ALG10
ZMPSTE24
VPS45
BCAP29
TMED7-TICAM2
TMED7
PCBP2
LTA4H
SUPT7L
SLC4A1AP
SYT1
TANC2
NAE1
CCNG2
VWA8
RNF150
STX18
KBTBD8
FEM1A
SERPINI1
PDCD10
PRPF18
TMBIM4
SESN1
GUCY1A1
GNAL
C21orf91
KIFAP3
H1-3
NMI
CBR1
LRRC57
HAUS2
RC3H1
AGK
TMED5
CCDC18
SCRN3
CIR1
ZSWIM2
WBP11
PCNX4
INTS12
GSTCD
C12orf60
ARL6
ZSCAN25
ARHGAP28
ATP9B
SRRD
HPS4
PEMT
PPIC
ZNF675
DEPDC1B
DENND1B
HENMT1
SS18
ZNF91
ZNF165
ANKRD46
INVS
ERP44
UMAD1
MRPL1
TRIM16L
HMGB1
NT5DC1
ELMOD2
RTRAF
LOC389831
KDM5A
CCDC77
TMX1
USPL1
SCGB1C2
CHAMP1
TMEM43
CHCHD4
LAMTOR3
RUFY2
FH
TTC30A
RBM45
STEAP1B
MPP5
MTFR1
PPIP5K2
GIN1
SENP1
SLC25A36
TBCK
RFT1
AIMP1
GATB
C2orf69
TOX4
RAB2B
CDC27
FIS1
ZCCHC4
KATNBL1
HSF2
ACYP2
SWAP70
FAM217B
SVIP
SYCP2
GDAP1
ULK4
RPS15A
ZNF614
IRAK3
STX7
RAP1GDS1
TMEM38B
CCNC
SLC9B2
ODF2L
CNOT2
POP7
TMEM242
RBBP9
RAB3C
ATP10D
B3GALT1
TUSC1
UAP1
NSUN6
ZW10
BLOC1S5
TRA2B
CHD8
WDR87
SIPA1L3
VEZT
FGD6
HMGB2
SNX12
ETFDH
C4orf46
RPS6KC1
NET1
DTD2
CAT
GLYATL1
ZNF510
SFR1
TTC26
COX7C
ZBTB14
ZNF326
PLPP1
SMARCA5
USP47
CGRRF1
SNRPD3
GUCD1
ITGA4
RGS2
C18orf21
TRIQK
MXD1
ZNF205
SREK1IP1
RAB27B
GPN3
FAM216A
CWC27
WDHD1
SOCS4
FAM110B
COPB1
ZNF649
BZW1
SH3GLB1
SPRED1
MTMR6
FAM174A
GUF1
ZFC3H1
THAP2
SLF1
KIAA0825
KANSL2
HEATR5B
GPATCH11
USP32
TCTEX1D1
RPL21
SEMA3A
SENP6
AADAT
ZNF391
EXOC5
AP5M1
HSD17B4
LRPAP1
NCOA4
GNG11
EEF1AKMT1
BIRC2
GHITM
RAB11FIP2
ACVR2A
C8orf37
PCSK5
CUL5
NUP54
HSCB
CHEK2
CTH
C14orf39
SCYL2
SCLT1
PSMD14
DEPDC4
C4orf33
SLFN11
PREP
TRAK2
STRADB
RANBP17
CDCA7
COG3
VCPIP1
C8orf44-SGK3
RPS7
ZFYVE16
RSPH4A
ZNF624
PTCD2
MRPS27
ULBP1
TSGA10
REXO5
ERI2
C2orf15
APOL2
ZNF74
POLR3E
CEP128
ZFP1
RABGAP1L
NKAIN2
ERICH2
CPLX2
RFC3
NBPF12
TUBE1
FAM229B
ZNF43
TANGO6
TMTC3
CEP290
NUP35
TIMMDC1
TMLHE
SPRY3
UBE2E2
CXCL2
TMTC1
WAC
FBH1
ANKRD16
PLEKHA5
MANEA
CENPC
C5orf51
PGM2L1
CAND1
ZNF736
IFNAR1
ZNF518A
USP38
RBM8A
NEK1
ZNF709
RABL3
OTUD6B
GTF2E1
ZBTB20
TLK1
TMEM248
MPPE1
CUL2
XPR1
TEFM
CBWD5
CBWD3
PEX3
ADAT2
GPR37
KPNA5
NUP58
NCEH1
BTBD10
ZNF330
CFTR
DNAJC19
ZNF76
MKLN1
KLHL7
THBS4
MTX3
TNKS
IFT74
NAP1L1
TMEM168
ANAPC5
ZKSCAN7
SPR
ITGAV
PRRC2B
TMEM17
SARAF
ZNF782
PSMA1
GTPBP10
TNPO3
METTL16
USP16
PNISR
GFM1
DNAJC24
DCDC1
PLEKHA8
SSH2
SUCLG2
RNF19B
ZC3H14
SLC2A12
PELO
ITGA1
TFAM
C1orf56
RAB8B
EIF5A2
ZNF92
TSPAN12
VTA1
NMBR
PGBD1
TFPT
PRPF31
THSD7A
PDIK1L
SLC30A1
SNX2
PAM
MTRR
FASTKD3
COMMD10
CFAP299
PTDSS1
MTERF3
BMT2
LDB2
QTRT2
CCDC191
CHAC2
CEP57L1
KCNK12
PCCA
ZNF343
NDUFS3
KBTBD4
NACA
TMCO1
C2orf73
SIKE1
ALKBH3
ZNF45
MTIF2
MED30
CCSER2
MTRNR2L2
MTHFD2L
SLC25A24
SRI
CASD1
SLC25A21
COQ3
ZNF451
CCNA2
THUMPD1
WDR61
RPS4X
GCFC2
NPM1
USP40
AQR
CDK5RAP2
ZNF491
ADAMTS3
TMX4
ANKRD36B
TSEN15
MKRN2
HIF1A
ANKRD17
CCDC93
AGGF1
STX17
TMCO4
TUBGCP3
ZNF708
NAA16
MTRF1
WDR36
FBXW7
RPL27A
RWDD1
CEP83
GLUL
HERC4
NPRL3
PRPF8
OCIAD1
RPUSD4
MMUT
FAM118B
CENPQ
ZNF461
PPWD1
CENPK
SPNS1
AKAP12
GRAMD1C
MIA3
ITPR2
PDCD5
HECTD1
MINPP1
ERV3-1-ZNF117
ERV3-1
RELCH
PIGN
ZNF227
EPHA3
TCAF2
ZNF780B
ZNF300
ZNF17
PRRC2C
MBIP
ZC3H15
CLCN3
CEP164
RBBP5
CEP70
SYT7
MCU
RUNX1T1
PRKCQ
ADGRL1
FAIM
KBTBD3
AASDHPPT
RNF7
FNIP1
FANCL
CCDC66
NHLRC2
DCLRE1A
HNRNPH3
IFI27L2
ZNF322
PBLD
LIN7A
GTF2H2C
GTF2H2
RAET1G
H2AZ2
NAPEPLD
MAP3K1
CTNNB1
PTBP2
FAM76B
CEP57
KBTBD7
TP53I3
CNTLN
MIS18A
RBM12B
SUCO
ZNF471
SPATA13
CAMLG
THAP5
PALLD
MRPL16
DNAJB9
ZNF202
INTS10
ZNF37A
GOSR1
ZNF222
PROS1
ANKRD36
RPL7
RDH10
KCNH1
SRSF7
AKAP5
PGM1
RAB28
UBQLN1
TADA1
CCDC7
DCAF10
PRMT6
YWHAG
DMXL2
CYP51A1
LSM10
NANS
ZSCAN12
TNFRSF19
LHFPL6
AFG1L
TTC33
ZNF470
GRIK2
ZNF628
ATF7IP
ZSCAN5A
CCDC83
HMGN1
RC3H2
DLC1
L3HYPDH
JKAMP
IQCH
AAGAB
ZNF25
IL12A
ING3
GORAB
RMDN2
ZCWPW2
AZI2
HEXA
ACOX3
PIAS1
HIKESHI
SMAP2
UTP15
ANKRA2
USP54
NEMF
HNRNPA3
FAM222B
POGLUT3
ABR
SRGAP1
NFRKB
TTC39B
GOT2
ETNK1
SLC25A27
CYP39A1
LUC7L2
FMC1-LUC7L2
MTMR2
ICA1L
COA6
FMC1
DLG2
SLC25A30
DZIP3
CIP2A
TOGARAM1
KLHL28
ACP6
NDUFAF2
ERCC8
TMEM126B
CMSS1
CFAP20
TMEM217
TBC1D22B
PPP1R12A
NHEJ1
CRISPLD1
CBR4
DYNC1I2
RFX5
PHACTR2
RGPD8
RGPD5
SOX5
THAP9
SEC31A
FAM214A
LOC100289561
MTX2
NOTCH2NLB
ASNS
AASS
DEPDC1
COMMD8
TOMM5
SC5D
STAMBPL1
NPL
TMBIM6
CHIC1
ZSCAN9
ZSCAN31
TXNL4B
PAFAH2
DHX38
CACNB2
C12orf57
RCOR3
KANSL1L
ST7
NUDT3
ELAC1
TRPS1
UBE2D1
PHF10
ZNF429
WDR77
ATP5PB
HSD17B12
PCTP
GUCY1B1
PDE12
SCN3B
IL15
CRADD
ALDH7A1
CEP55
TFCP2
GBA
PIMREG
NRXN3
CLTC
CFAP69
CRB1
TASP1
ZFYVE19
DNAJC17
PKIB
ATL2
BLMH
GCA
ANK2
CAPRIN2
SEH1L
FAM135A
H2BC18
LRRC6
H3C13
DNAH14
RNLS
FAM162A
CCDC58
ARL13B
ZNF441
ZFP62
KITLG
DSTYK
RIF1
CEP120
ZNF253
PCOTH
MIPEP
ZNF714
PIGK
RPL32
ZNF35
RNF111
VWA5A
MRPL3
MMS22L
CRYM
FASTKD1
FARSB
YAE1
MSRA
RNF135
CLSPN
C1orf53
RAD52
SKP1
PHTF1
SRSF6
H2BU1
H2AW
PDE3B
ABI1
ANKRD42
SMIM10L1
PRH1-TAS2R14
ZNF484
ICE2
FAM161A
LRP2BP
ANKRD37
MINDY4
EIF1B
SLC35B1
DELE1
SYT3
C2orf42
JMJD7-PLA2G4B
JMJD7
ZSCAN22
ZNF24
TDRKH
RPL37
NHSL1
DUS2
DDX28
ZMYM1
JMJD1C
ERAP1
IQSEC1
EPS8
CNOT6L
LANCL2
ARMC4
B3GALNT1
SMNDC1
PDE7A
WASHC4
CCN3
RNF182
SSPN
ADSS2
LEKR1
PSTK
ACAT1
MRPL58
ANTXR2
UEVLD
MICU2
ATF2
NCOA3
ERGIC2
DPP9
SBF2
STX11
MACIR
PTPN14
HINT3
ZNF830
CCT6B
EPB41L5
ZNF720
PPM1L
TNIK
TAP1
PSMB9
SSBP1
DNAJC15
TRAM1L1
TCHP
YY1AP1
DAP3
NBPF15
ACTR6
SLC37A3
LARS1
EXD1
CHP1
ZNF354C
TFPI2
N4BP2L2
C1orf174
ASB8
ANK3
PIGU