ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3585704 | Lung fibroblasts
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◣ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
USP31
RAD51AP2
METTL3
MTRNR2L8
CCDC88A
NSA2
GFM2
HSPE1-MOB4
HSPE1
HSPD1
CRH
CCNT2
GTF2H4
MRPL28
LSM6
C7orf25
LCORL
DARS2
CENPL
TANK
NOTCH2NLC
MED23
DLAT
YIPF5
KCTD16
MRPL48
EIF2D
ATE1
NBPF1
PLK4
ATL1
MRPS30
EID1
COX18
LYNX1-SLURP2
LYNX1
NBN
LOC389831
KCNJ2
ITGB3BP
EFCAB7
EFHD1
FANCF
SAXO1
RRAGA
TMEM71
PHF20L1
STK17A
NOTCH2
PHF3
RNPC3
GPR89A
VRK2
TTC21B
COG6
MRPL42
LDHB
DTWD2
UFM1
FRA10AC1
TMA16
NFE2L2
PIP4P2
FEM1C
CLN3
CEP85L
MTIF3
ZNF250
AGBL3
PHIP
POLR2M
SPEF2
ANAPC10
ABCE1
IKZF2
RPGRIP1L
FTO
MFAP3
FAM114A2
AP3B2
AFF1
IL18R1
SCOC
BBS10
ABCD3
NDUFAF1
CAP2
MPHOSPH6
SPATA17
GPATCH2
ZNF891
ZNF10
USP30
SLC30A9
ZNF32
WDR3
GDAP2
BET1
DBR1
COBLL1
LCA5
DCP1A
WDR35
CMTM6
CETN3
ATR
UFL1
NSFL1C
C8orf88
MRPL10
LRRC46
TPR
ORC4
ODR4
MBD5
KRR1
CDK8
CBWD5
CBWD3
TCAF1
CC2D2B
IRAK1BP1
CNOT4
CLDN12
WDPCP
MDH1
PDCD2
SNRPD1
ZNF93
PFKM
CCDC178
ZNF780A
FOXO3B
MTF2
SUGCT
MPLKIP
FBXW4
GINS3
NBPF3
REL
SNX15
SELENOT
ZNF214
NLRP14
SULT6B1
CEBPZOS
TMEM106B
PDCD6IP
CTR9
DNAH2
TMEM260
HEMK1
DHRS7
C10orf88
WDR11
DECR1
DSCC1
USP15
FAM227B
DTWD1
LAMA2
SLC25A40
DBF4
CCDC59
DERL1
TSN
BLOC1S6
C12orf66
ALG10
PTX3
ACER3
CSTF2T
DHX36
KDM8
RNF146
FAM126A
CREBZF
MRPL39
DNAJC3
ZNF670
GLIPR1L2
GAP43
DOP1A
GHR
TTC30A
KLHL20
ZCCHC7
SOAT1
PUS10
PEX13
SLC39A10
HLCS
RNF150
CDKN2B
SNRPF
MRPS28
DDX60
GTF2B
USP45
GLCE
ITPRID2
H4C11
PCBP2
HEPACAM2
MRPL44
SYNGR4
GPC6
NRAS
GNPDA2
VPS50
MTRNR2L2
TNPO1
NCOA7
PRPF38B
BAZ2B
PDGFD
VPS41
RBIS
SUPT7L
SLC4A1AP
RICTOR
STX18
RPSA
CCT2
FNTB
ASCC3
MAP9
BCAP29
TMED7-TICAM2
TMED7
PINX1
FEM1A
TAP2
ZNF675
IFTAP
CBR1
ZMPSTE24
SYT1
LRRC57
HAUS2
ARHGAP28
NAE1
ATP9B
LTA4H
SERPINI1
PDCD10
PRPF18
RC3H1
TANC2
GUCY1A1
CCNG2
C8orf37
C21orf91
TMED5
CCDC18
KIFAP3
DEPDC1B
MPHOSPH10
MCEE
NMI
ZSWIM2
VPS45
TMBIM4
MRPL1
PEMT
KBTBD8
H1-3
CDC27
WBP11
PCNX4
INTS12
GSTCD
C12orf60
ARL6
SESN1
AGK
HENMT1
AHCTF1
SRRD
HPS4
SCRN3
CIR1
SLC25A36
ANKRD36B
DENND1B
PAXBP1
GNAL
SS18
PPIC
RTRAF
ANKRD46
INVS
ERP44
ULK4
TMX1
ZSCAN25
RBBP9
NPM1
VWA8
C2orf69
TOX4
RAB2B
TBCK
RFT1
AIMP1
TMEM43
CHCHD4
ANKRD36C
NT5DC1
RUFY2
SWAP70
TMEM38B
FH
ZNF165
PPIP5K2
GIN1
SENP1
UMAD1
CHAMP1
HMGB1
SVIP
GDAP1
MPP5
USPL1
GATB
RAB3C
ATP10D
ZNF510
STX7
LAMTOR3
TUSC1
FAM217B
ZNF91
SYCP2
ODF2L
BLOC1S5
MTFR1
RPS15A
TRIQK
MXD1
RBM8A
KATNBL1
RAP1GDS1
HSF2
HMGB2
UAP1
USP47
RBM45
CCNC
CNOT2
ZCCHC4
IRAK3
B3GALT1
RPS6KC1
POP7
TRA2B
KDM5A
CCDC77
FIS1
NBPF15
SFR1
VEZT
FGD6
ACYP2
MTMR6
CGRRF1
CAT
TMEM242
C18orf21
GLYATL1
ZNF614
ZNF205
SREK1IP1
RAB27B
GPN3
FAM216A
CWC27
BZW1
WDR87
SIPA1L3
ZBTB14
AADAT
ZNF326
NSUN6
SMARCA5
ZNF391
SNRPD3
GUCD1
WDR36
ITGA4
ZW10
RGS2
GNG11
TTC26
COX7C
HEATR5B
GPATCH11
SCYL2
SCLT1
PSMD14
DEPDC4
C4orf33
NPRL3
SPRED1
ELMOD2
PLPP1
PCSK5
CUL5
MANEA
FAM174A
NET1
SLF1
KIAA0825
KANSL2
SLC9B2
CTH
NCOA4
SCGB1C2
WDHD1
SOCS4
FAM110B
USP32
TCTEX1D1
SENP6
NUP54
EXOC5
AP5M1
GUF1
HSD17B4
RFC3
ZFC3H1
THAP2
ZNF43
C14orf39
NUP35
EEF1AKMT1
CHD8
PTCD2
MRPS27
NEK1
RAB11FIP2
ACVR2A
SH3GLB1
HSCB
CHEK2
TNPO3
LRPAP1
IFNAR1
COPB1
RPL21
BIRC2
ULBP1
TSGA10
REXO5
ERI2
C2orf15
APOL2
ZNF709
PREP
RANBP17
ZFP1
FBH1
ANKRD16
C5orf51
ETFDH
C4orf46
VCPIP1
C8orf44-SGK3
TMTC3
CEP290
GHITM
ZNF74
METTL16
WAC
SNX12
PLEKHA5
NKAIN2
STEAP1B
CENPC
COG3
CPLX2
TUBE1
FAM229B
CAND1
RSPH4A
NUP58
ZNF649
SLFN11
POLR3E
TMLHE
SPRY3
RABL3
OTUD6B
GTF2E1
NCEH1
BTBD10
UBE2E2
ZBTB20
TMTC1
CDCA7
TMEM248
RABGAP1L
CUL2
THBS4
MTX3
PGM2L1
DTD2
RPS7
TANGO6
IFT74
ZNF518A
TMEM168
ZNF330
USP40
XPR1
TEFM
ZC3H14
ERICH2
PEX3
ADAT2
GPR37
KPNA5
ZNF736
ZNF286A
CEP128
CFTR
ANAPC5
VTA1
NMBR
AQR
NUDT4B
ADGRL1
MPPE1
ZNF782
PSMA1
TSPAN12
ZNF624
SEMA3A
USP16
PNISR
GFM1
NACA
CDK5RAP2
ITGAV
PRRC2B
KLHL7
TNKS
C1orf56
RAB8B
ZFYVE16
NAP1L1
USP38
DNAJC19
PGBD1
NUDT4
TRAK2
STRADB
SPR
PLEKHA8
PTBP2
TLK1
STX17
SARAF
MKLN1
SLC2A12
PELO
ITGA1
TFAM
NAA16
MTRF1
CEP57L1
PCCA
ZNF343
ZKSCAN7
DNAJC24
DCDC1
TMCO1
C2orf73
THSD7A
ZNF76
AKAP12
SLC25A24
SLC30A1
SNX2
PAM
SRI
SUCLG2
PDCD5
AGGF1
GTPBP10
PTDSS1
MTERF3
BMT2
EIF5A2
ZNF92
WDR61
SIKE1
ALKBH3
PRPF8
OCIAD1
IFI27L2
MTHFD2L
PRKCQ
RNF19B
CASD1
TSEN15
TMEM17
TMCO4
MTRR
FASTKD3
COMMD10
CFAP299
LDB2
ZNF227
CEP83
GLUL
RPS4X
GCFC2
NDUFS3
KBTBD4
ZNF491
ADAMTS3
GRAMD1C
ITPR2
HECTD1
MKRN2
ERV3-1-ZNF117
ERV3-1
ZNF708
MIS18A
COQ3
RWDD1
CCNA2
CCDC66
HERC4
ZNF780B
ZNF45
MTIF2
MED30
RPUSD4
MMUT
FAM118B
CENPQ
ZNF300
ZNF17
PRRC2C
MBIP
ZNF322
TMX4
CCSER2
PDIK1L
PROS1
MIA3
FAIM
HIF1A
MINPP1
GPR89B
DCAF10
TUBGCP3
SLC25A27
CYP39A1
TP53I3
FBXW7
QTRT2
CCDC191
CHAC2
EPHA3
HEXA
ACOX3
ZC3H15
CLCN3
CAMLG
SYT7
RUNX1T1
SRSF7
ANKRD17
FAM76B
CEP57
SLC25A21
KBTBD3
AASDHPPT
GOT2
ASNS
RELCH
PIGN
CNTLN
RPL27A
FANCL
THUMPD1
DLG2
NHLRC2
DCLRE1A
NANS
HIKESHI
HNRNPH3
CEP164
PBLD
LIN7A
GTF2H2C
GTF2H2
THAP5
PALLD
MRPL16
DNAJB9
TNFRSF19
LHFPL6
AFG1L
UTP15
ANKRA2
TMEM126B
MAP3K1
CTNNB1
SSH2
AKAP5
CCDC93
H2BC18
H3C13
TTC39B
RNF7
RBM12B
SUCO
ICA1L
CYP51A1
GORAB
KCNK12
ZNF471
ACP6
ZNF461
PPWD1
CENPK
RAET1G
ZNF202
INTS10
TTC33
USP54
CMSS1
MCU
POGLUT3
SRGAP1
DLC1
KCNH1
PGM1
RAB28
UBQLN1
TADA1
PRMT6
DMXL2
FNIP1
ING3
COMMD8
ZNF253
ZNF714
PIAS1
SPATA13
ZSCAN12
SPNS1
RBBP5
CEP70
ZNF37A
ZNF470
GRIK2
CFAP20
CHIC1
SLC37A3
FXR1
H2AZ2
NUTM2E
ABR
NAPEPLD
RC3H2
L3HYPDH
JKAMP
RMDN2
ZCWPW2
AZI2
CRADD
GOSR1
ZNF628
ATF7IP
TMEM217
TBC1D22B
ZSCAN9
ZSCAN31
GBA
KANSL1L
HMGN1
ERAP1
RPL7
RDH10
THAP9
SEC31A
FAM214A
FAM135A
CCDC7
ETNK1
YWHAG
IQCH
AAGAB
NBPF12
ZNF25
IL12A
DEPDC1
COA6
TOMM5
GUCY1B1
STAMBPL1
LSM10
TOGARAM1
KLHL28
YY1AP1
DAP3
SMAP2
CEP55
ZSCAN5A
NEMF
PPP1R12A
NHEJ1
CRISPLD1
CBR4
ST7
RAD52
PHACTR2
SOX5
SEH1L
PHTF1
LOC100289561
NFRKB
MTX2
ZNF441
MTMR2
PDE12
IL15
TIMMDC1
DZIP3
CIP2A
CBWD6
DYNC1I2
TXNL4B
PAFAH2
DHX38
CACNB2
C12orf57
RPL32
SYT3
C2orf42
TRPS1
UBE2D1
SKP1
CAPRIN2
PHF10
RNLS
RNF182
FAM162A
CCDC58
ANKRD18B
ARL13B
ZNF429
WDR77
ATP5PB
STAT6
AASS
PCTP
CEP120
TRIM16L
HNRNPA3
PIMREG
NRXN3
CLTC
CFAP69
ZNF35
RNF111
JMJD7-PLA2G4B
JMJD7
TATDN3
NSL1
NUDT3
ELAC1
BLMH
ANKRD36
GCA
SRSF6
MARCHF7
LRRC6
DNAH14
ABI1
KITLG
HSD17B12
ANKRD42
SC5D
SCN3B
SLC25A30
PCOTH
MIPEP
LRP2BP
ANKRD37
PIGK
TMBIM6
ALDH7A1
DELE1
CCDC83
FAM222B
RFX5
CRB1
VWA5A
MRPL3
MMS22L
CRYM
LXN
MSRA
RNF103-CHMP3
RMND5A
CLSPN
C1orf53
IQSEC3
WASHC4
PDE3B
LUC7L2
FMC1-LUC7L2
RIF1
NEIL3
FMC1
EIF3E
SMIM10L1
PRH1-TAS2R14
ICE2
NPL
SLC35B1
RCOR3
TASP1
FASTKD1
FARSB
ZSCAN22
ZNF24
TDRKH
RPL37
LARS1
EXD1
CHP1
ANP32E
JMJD1C
ATL2
RNF135
LRRC37A3
STX11
EPS8
CNOT6L
MACIR
PDXDC1
PDE7A
HINT3
ZNF830
CCT6B
CCN3
SSPN
ADSS2
ZNF254
EPB41L5
KBTBD7
PSTK
DSTYK
ACAT1
MRPL58
ANTXR2
MINDY4
TCHP
ACTR6
ZFYVE19
DNAJC17
YAE1
NHSL1
DUS2
DDX28
MICU2
ATF2
ZNF354C
VPS13B
DESI2
TECPR2
CINP
IQSEC1
LANCL2
B3GALNT1
SMNDC1
TFDP2
ZNF720
PPM1L
ZNF823
TAP1
PSMB9
KIAA1586
SLC10A7
ADH5
SSBP1
IFRD1
EIF1B
TRAM1L1
ZRANB2
UEVLD
ZNF222