ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567335 | HUVEC
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◣ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
GTF2IRD2B
NAA25
COQ2
MCU
SYT7
JRK
NREP
RNF220
EPHX1
DEDD
ZSWIM6
LRP12
ZNF341
ANKRD40
CNIH1
CCN2
MSRA
MXI1
KDM3B
ZNF860
OSBPL10
KATNBL1
DISP3
HOXA4
DNAJC25-GNG10
DNAJC25
CERS6
RHOB
TES
TMEM245
STK17A
NSFL1C
LDLRAD3
ARHGAP26
BTG1
IBA57
MARK2
LMO4
RAP2B
NUDT4B
KANSL1L
CHRNA5
JMJD1C
SCAP
AGFG1
EIF4H
NCOA5
YWHAQ
ZNF839
NUDT4
TOP2B
OPN3
CHML
RHBDF1
GRIK4
HEBP2
TTLL11
RPS19
GALNT10
SLC39A10
BASP1
ETS1
DUSP5
HHIP
MAP2K2
POLG
TUBB4B
UPF1
JPT1
SPTAN1
GNAI2
EPM2A
PURA
MET
PUF60
VPS36
PTBP1
FBXO30
ZNF609
PINK1
G3BP1
ACVR2A
PDCD2
BCAP29
ZNF280D
ASXL1
ARHGAP29
UBE2S
GNB4
LIMS1
CCSER2
NADK2
CCDC71L
PRICKLE1
ARID5A
TSPAN5
QSOX2
KMT5B
TLN1
CREB3
MARVELD1
FBXL7
PIGX
CEP19
WDR26
SIRT1
TMEM71
PHF20L1
CRPPA
BCAR3
ZFAND3
ZHX3
YBX3
ACTB
DOCK7
SRSF9
DYNLL1
SOCS5
TBC1D8
LIN9
ST3GAL3
NFIB
ACVR2B
FOXN3
LDB1
CHST3
ATXN2
SLC4A7
SPTLC2
TAF4
ECHS1
ENTPD4
ITGB1
INPP5F
PREP
MAML1
PSD3
SIK3
SMAD4
SNRK
TMEM255B
BACH1
THSD7A
ZNF362
ATL2
GCLC
RRAS2
TM2D3
ESYT2
TMEM203
NDOR1
SLTM
C1QBP
SLC20A1
TCF4
SUN2
NXF1
ELL2
EXT1
SETD7
SYPL1
RIC1
ARNTL
RAB11FIP2
PPP3CB
CLTB
SHOC2
BBIP1
STK39
SPDYE14
SPDYE10P
MYO1B
CDR2L
ZNF668
ZNF646
MFSD14B
VAMP3
PTEN
KLLN
PRR7
PRKAG2
TATDN2
MOV10
TSPAN3
MCC
EIF4G1
UGCG
OXR1
AKAP7
ARHGAP28
HDGF
NOXA1
ZMYM4
FBXL13
ARMC10
INO80D
TDRD7
TRIM65
LRP8
SORBS1
AP3D1
EPN1
SLC25A37
CCDC138
RAC1
ETV6
TTC21A
GORASP1
RNF146
EID2
RALGAPB
PRKAR2B
SSNA1
ANAPC2
TPK1
ACTR10
BMP4
DTWD2
CPSF6
UST
WDR1
USP3
CAPN1
TMX4
PRKCA
OAT
FAM222A
AP3M2
HECTD2
ZDHHC14
ARHGAP42
NOCT
PLCB1
STK35
TGFBR2
KLF9
ZNF124
CASTOR2
PARVA
HESX1
APPL1
CHST11
CD164
ZMIZ1
ZC3H12C
UBE2J2
MAP3K3
FXN
ETS2
CHMP5
BAG1
TCF7L2
ATL1
MAP4K5
TSKU
BLOC1S4
SNTB2
TRIM44
LRRC8D
ZNF706
VRK1
TRAPPC3
MAP7D1
JAK1
TSPAN10
NPLOC4
FAF1
GNG12
TMEM64
RALB
PEX7
PHRF1
ZSWIM7
TTC19
SLC35B2
STK24
AHCYL1
MTHFD2L
ADORA2B
KCTD18
MSANTD2
TACC1
CMTM3
AHCYL2
D2HGDH
IER5
SBNO2
C7orf26
FBXO33
NAV1
SMIM19
SLC20A2
RNF103-CHMP3
RMND5A
EHD4
IKZF2
GCLM
ECI1
PRKAR1A
IFFO2
TFAP4
SASH1
DEK
NDUFAF6
NUTM2E
SEC24B
VPS4A
RHOBTB1
SMIM13
HMGB1
GAB2
DGAT1
UNC5B
PAM16
FAM174C
ST7
SRSF4
SSU72
CAPZA2
NFKBIA
GATAD1
PELI1
HMGN1
ZNF513
LRIG3
LIX1L
DONSON
DENND4B
SMARCD2
LPIN1
FAM193B
CDC42BPA
YPEL2
NR2C2
HEXD
NACC1
ZFPM2
ARHGAP10
PEAK1
HMG20A
METTL9
PTGES2
HIPK1
KBTBD2
OSBPL5
VPS26A
CDC42
MAP2K1
WTAP
SOD2
SOCS1
HYI
VCL
MAP4K3
ATXN7
UBE2E2
PCBD2
CALM2
EXOC6
LIG3
CREM
HHEX
LCOR
CCDC117
ASAP1
NOTCH1
BZW1
AFAP1L1
EDIL3
XXYLT1
TOR1B
NAA38
CHD3
OTUD4
CEP68
RAPH1
NR3C1
FCHO2
CAMSAP2
TMEM131
ECE1
TMEM51
PHC2
ZBTB25
ZBTB1
MARCHF6
PRDM2
H3-3A
ENPP1
TMEM185B
H2AZ2
RBM17
ZFAND6
UBE2M
HGH1
PIK3CA
JUP
NIPSNAP2
EPB41
LACTB
PTPRA
ARID1A
MORC2
YBEY
MCM3AP
CEP170B
BSN
HGS
ARL16
DUSP7
COA8
BAG5
ZSWIM8
PLPP4
FDX1
GRK5
UBXN2A
GXYLT1
ZFAND5
GET4
UBN2
APPL2
ANKRD54
SNAI1
FAM171A2
TM7SF3
TP53INP1
ZNF511
TUBGCP2
PLCL2
TPM1
NEDD4
INPP5A
SFT2D3
NUDT3
ZHX1-C8orf76
ZHX1
INPP1
ARHGEF37
RAB4A
ADD1
RAB32
RAB21
HEG1
TIGD5
EEF1D
RSAD1
TOMM40
TERF2
SPIN1
NT5DC2
TRIM33
ARFGEF2
ILKAP
PABPC1
DCBLD1
ZNF445
IGFBP4
CAST
LYPLA1
CARS2
MBTPS1
SFXN1
OSBP
SCN8A
SRXN1
CHAMP1
USP36
RAB7A
NFIA
LRRFIP1
RAB35
NIN
WDR37
TNIP2
PRPF40B
UBE2H
NRIP1
B3GALNT2
HSP90AA1
MTMR12
BOD1
IDUA
ITPRID2
NEK7
ROCK2
NXN
ITPKC
COQ8B
FBXL5
NECTIN1
KIF27
SMAD3
TP53BP2
PRDM11
REST
GTF2IRD2
ZFAND4
GGA2
PDSS1
LIFR
GLRX5
B3GLCT
NAXD
ZNF76
TM9SF3
NCOA6
DEGS1
TOLLIP
NUAK1
TMEM263
ELK3
DNAJB6
HPCAL1
UHRF2
JADE2
SSX2IP
TPBGL
ANKRD36B
RGL1
PHF20
PI4K2A
PPM1M
CSF1
SPATA9
RHOBTB3
STAT5B
BRPF3
ZNF148
PDIK1L
TCF12
DNMBP
SMAD5
PTTG1IP
ANKRD12
DPY19L3
GPR146
CSK
CKAP5
PRDM5
GRK2
FKBP1A
SBF2
PLOD2
RAP2A
TXNDC5
MITF
TMED7-TICAM2
TMED7
SLC25A24
TNFAIP3
HRH1
RAB40C
MAP4K4
DYNLL2
CXCL3
R3HDM2
POGLUT3
RUNX1T1
TXNDC16
GPR137C
ACVR1
RUFY1
INAFM2
DMWD
YBX1
H2AZ1
LIMS2
RCOR1
ZNF783
SQSTM1
SEPTIN9
RALY
SPRING1
RNFT2
CUL3
HNRNPAB
KCTD3
ADRM1
ELK4
PEX10
TNKS2
SPR
SH3D19
WTIP
TUBB2A
CDK14
C16orf72
FHL2
CSNK1E
EIF4ENIF1
HACD2
PANK3
RBFOX2
SDCCAG8
CEP170
PREX1
PPP2CB
MLYCD
NUCKS1
SYNE2
GPCPD1
SH3BP5
KLHL5
CACHD1
CTCF
MARK1
TBC1D30
SMURF1
SEMA3F
SLC25A42
MMP24
COBLL1
UBAC1
LOC100287896
LIPT2
DAPK2
LPP
C7orf25
COPRS
BMP1
OAF
PRNP
ABCA3
MFSD14A
ERRFI1
SLC6A6
ENDOD1
FAM241A
RBM26
GNAI1
USP10
FLNC
RNF152
ZC3H7A
BPNT2
NAB1
SNX25
CFAP97
ELF2
DNAJC21
SNX5
MGME1
C11orf91
ZNF48
LMBR1
ZNF22
ELAC1
SGMS2
NFKBIE
DPYSL2
ZBTB8A
NT5C2
PTPRE
RIPK1
PTAR1
RBPJ
MCMBP
DTD1
NIT2
PANK1
RNF216
C17orf58
FAM107B
NEDD4L
SMARCC1
ADAM23
TLE3
FUBP3
FLT1
FOXN2
CDCA4
YRDC
C1orf122
HERC2
ATRIP
GOLGA3
H1-10
MYO5A
USP14
ODC1
ANKRD52
SOBP
ARHGEF7
ZNF131
NAP1L4
HEY2
C15orf61
TBC1D9
SEMA4D
CANT1
PEX5
TAL1
PDP1
ZBTB20
ARHGEF11
CRTAP
MBD3
TMEM80
DEAF1
UBE2Z
EEA1
ZNF503
DDAH1
VPS54
RGMB
SLC2A1
SCCPDH
DENND5B
BAZ1B
SRF
KLF7
SNX24
DUSP10
IDH3A
PLEKHA8
GID8
DIDO1
PODXL2
CIRBP
PTPRB
SPRY2
HSPG2
USP49
VEZF1
ITSN1
CRYZL1
MBD2
UXS1
ARHGAP32
USP24
ZFYVE21
XRCC3
LRP11
ZFP91
LPXN
ADAR
PRSS27
PLCL1
USP6NL
TSR1
SGSM2
NFKBIZ
GSK3A
DST
NTAN1
SLC27A4
BEND6
TAF5
LYNX1-SLURP2
LYNX1
LRRC37A3
PFN2
NUDT19
MEAF6
SCARA3
RNF139
RAD23B
ATXN7L1
SPPL3
UBE2E3
FOXP4
SLC45A4
CFL1
ULK1
C9orf72
SPCS3
ADNP2
GNPTAB
RFXAP
OSGIN2
YPEL1
UBE2D2
ATP11B
TKT
ARIH1
NRG2
MGAT5
PXK
CPOX
PANK2
UTS2B
CCDC50
FBN1
ZCCHC3
ADAM10
SH2B3
DPY19L1
XKR6
FANK1
SHROOM1
GPR157
CKS2
INPP5E
CXXC5
CARNMT1
NAMPT
RAP1B
PDK1
CAPN2
RC3H1
LHPP
GDF11
LRRC8A
KYAT1
ASB1
CCDC88A
TRPC1
DESI2
ZNF697
PKIA
MDFIC
CREBBP
FKBP5
USP31
PTX3
SUMO2
SVIL
LEMD2
ACSL3
TMEM150A
FKBP9
FNTA
CD81
FMNL2
KHDRBS1
NT5DC3
CHMP4B
CIZ1
UVSSA
RNF169
LRRC8B
ARL2
ATP13A3
TRAK2
STRADB
ARL5A
CSRNP2
TRRAP
PNKD
LAMC1
APLP2
SMCHD1
PRKCE
LRRK1
SIN3A
REV3L
ITGAV
SLC30A1
SETMAR
TARBP1
OSBPL1A
PACS2
BRF1
CYP2U1
JADE1
KDM4B
RFX3
PTPN4
TMEM181
ZMAT3
XPO1
MTMR10
CSNK1G3
ABCB10
ZNF710
FAM47E
CLK3
SCARB2
TMCO3
DCUN1D2
TMEM150C
AP3B2
MSRB2
RELA
FAM53B
FOXK2
MICAL2
SIPA1L2
CTSO
PHC1
ZHX2
ZNF282
IMMP2L
FRYL
MAP3K14
CHIC2
KCNC1
HGSNAT
SLK
COL18A1
AKAP12
CDV3
B4GALT5
CDC16
VARS1
RAI14
ACVR1C
OTULIN
TBC1D14
PTPRG
RNF135
ANXA4
SENP8
MYO9A
AAK1
RAI1
CNNM4
MAN1A2
LGR4
PLXNA4
ZNF652
PRSS23
PRICKLE4
FRS3
GLI3
MAP3K5
HOXA11
DDHD2
IDH2
CPE
PPP3CA
TGFBR1
SHLD2
GLUD1
DHRS13
NATD1
RCN2
DIS3L
PODXL
SACS
MIA3
RMI2
ZNF653
SUSD6
SRSF2
MFSD11
FBXO32
UCK2
XKR7
USP25
MGAT5B
VPS26B
NCAPD3
ZNF518B
NFE2L2
CAPN5
CHFR
REEP3
STK3
GNB5
RGS7
HNRNPR
MFSD14C
WRNIP1
REXO1
ZDHHC23
CMTM7
ZFYVE9
TSEN54
CASKIN2
LRRC8C
PLPP3
TUBB6
RALA
CHST10
TEX9
RFX7
NOMO3
NOMO1
PMPCA
ENTR1
FAM124A
UBP1
GPRIN1
ENDOG
PIGZ
PYGB
KTN1
TLCD5
FMNL3
CLIC4
DNPH1
RNF11
HOXB4
STX7
FOXJ3
PLCG1
SERTAD2
EXT2
CREBRF
DCTD
SLC36A4
SVBP
ERMAP
ME2
OARD1
NFYA
INPP4A