ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567329 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◣ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
NBPF1
PHIP
TAF5
CDCA7
USP31
CRH
THOC3
IRAK2
MFSD2A
ALDH18A1
SRSF6
H4C11
ADCK1
POLR3H
TMEM41A
GPR89B
FLVCR2
FH
PIGH
C1orf53
RANBP17
METTL3
ABCC5
FEM1A
DHPS
CLCC1
NUP54
CREBZF
ZNF442
CDKN2B
GINS3
MTMR9
PEBP1
KCNIP2
CRYBG3
DDX1
MFSD3
H4C12
RPLP1
GPR89A
RINT1
PTGES2
SDF4
B3GALT6
SLC10A7
NAAA
NAE1
DARS2
CENPL
ADGRL1
ATP6V0E2
CLSPN
TCERG1
CCNB2
ZNF878
PDXDC1
CDC37L1
MYO5A
IARS2
PPAN-P2RY11
PPAN
SLC26A6
ZFP64
CUL5
POLR2J3
NR2C1
LUC7L2
FMC1-LUC7L2
FMC1
LSM6
USP30
CTH
FOCAD
COX18
TOX4
RAB2B
NF2
IGSF8
MRFAP1
CRTAP
TBC1D16
CCDC40
TMX4
RNF135
ZC3H14
GGH
SEMA6C
NSFL1C
CYP2R1
ZNF774
C15orf61
STX18
ZNF419
C14orf132
ASXL2
HYLS1
PUS7
RBM5
CHGB
ZC3HC1
ZNF429
H1-3
RAB11FIP2
UCHL5
RO60
NRXN2
RBMXL1
KYAT3
CBR3
CFL2
DHRS7
WDFY2
MTF1
TMEM33
SGCD
ZDHHC14
USP47
FDFT1
POLR3G
MBLAC2
DNAH2
TFDP2
VASH2
TARS3
C12orf45
ZNF555
ATP7B
ALG11
SNRPB
TMEM68
TGS1
SLC66A3
ABI2
XPR1
SCN3B
ABCB6
ZNF197
NOTCH2NLA
COQ8A
PRKAB1
TENT4A
RSU1
UHRF1BP1L
HERC6
ZNF862
CHD1L
CSTB
ITGA4
YARS2
CEP83
ATXN7L3B
CTSL
ENDOD1
SECISBP2L
HEATR5A
SUMF1
ZNF799
TYMSOS
TYMS
SELENOT
SLC25A30
PCOTH
MIPEP
C18orf25
PPP2R5B
C17orf64
RIF1
SMIM5
EFR3B
SERP1
EIF2A
NFATC2
HSD17B12
SYNGR4
DEPDC1B
CASP7
ASH2L
LTO1
CC2D2B
SLC25A27
CYP39A1
CCDC112
CRY2
RSPO2
AAR2
OSBPL1A
PDZD2
TOR2A
GALK1
ATP5MC3
CCPG1
C15orf65
CMTM7
PDS5A
AHCY
AKR1E2
ZFYVE16
YIPF4
INTS6
TAP2
IFTAP
VPS35
LCORL
PEMT
SEPHS2
DNAJC30
BUD23
IREB2
XRN2
FAM219B
OLA1
ARMC1
NFKBIE
VAV2
GTF2B
RBL2
MTX2
CPLANE1
PUS1
ZNF786
WASHC2A
C9orf40
SLC1A4
H2BC18
FANCA
ASAP3
H3C13
RDH11
ZNF566
STRIP2
MICAL3
PPIC
MRPL21
IGHMBP2
CEP97
NOTCH2
PDCD6IP
ICA1L
NUDT7
EFS
ABCC9
METAP1
DEF8
GPR39
MRFAP1L1
PACC1
LOC389831
RFK
TMEM9
GTF2IRD2B
EPS8
ANKRD36C
EFHD1
KCTD12
RNLS
ZYG11A
RNF7
DMXL2
ZNF337
NLE1
PSAT1
USF1
ANKRD36B
TECPR2
CINP
PAM
ME3
WWC2
FANCF
ACOT2
TSTD3
SPECC1L
ARHGAP22
PLEKHA5
ANKRD18B
ZNF441
SNPH
ZNF407
IL15
IMP4
GOLGA1
CCDC115
UBE2G1
NSA2
GFM2
ARMC8
CCNC
SLC35E2B
ZNF564
MTFR1
CCDC74B
ZC2HC1C
ACYP1
DESI2
ZFP1
CLIP1
MTMR6
GAS1
SLC2A12
SIL1
CDK8
ATR
TSNAXIP1
RANBP10
CCDC91
ERAP1
KATNAL1
ZFP69B
ZC3HAV1
C3orf33
ANKRD46
VAT1
TRIM52
ATF3
DYNC1LI1
MYEF2
CTXN2
CNIH4
TADA1
HSPE1-MOB4
HSPE1
HSPD1
PIK3C2B
DTD2
CFAP206
VSIG10
RAB18
ZBTB45
CMTR1
CTDP1
RAB11FIP3
RMND5B
SLC35E4
PLK4
ROPN1L
ZNF25
UGGT2
SLC30A5
LSM5
AVL9
TTLL4
ATL1
ELMOD2
CEP85L
VRK2
GTF2H4
SEC11C
CLK4
H3-2
SLC25A38
LNPK
NGRN
E4F1
BMPER
HSF2
INVS
ERP44
DZIP3
CIP2A
MARCHF3
TFRC
SDHAF4
MRNIP
MSRA
BZW1
MCMBP
NRG1
CCDC126
MAST4
NT5C
TSN
BARD1
CDKN3
PREB
TNPO1
LYST
CLASP2
SERPINI1
PDCD10
SOX6
C11orf58
ZFP41
TRIM72
SLC16A14
C15orf48
EPHB1
SPATA18
TSC2
NTHL1
PWWP2A
MRS2
KBTBD6
ZNF624
RAD21L1
NBEAL1
LRRC2
GRAMD1B
ELOVL5
STK10
AKTIP
STRIP1
TCHP
SLC26A2
BLMH
PAK2
FADD
PNPLA2
TERF2IP
KARS1
MTRR
FASTKD3
TAP1
PSMB9
KIAA1586
TRIM62
LSM10
ZRANB3
R3HDM1
ANKHD1-EIF4EBP3
ANKHD1
ZKSCAN3
RPL39L
ANKRD36
SKP1
ZNF777
RCBTB2
DEPTOR
UBXN4
FNTB
TMEM242
TARDBP
ERBB3
RSF1
AAMDC
GPATCH2L
ETFBKMT
ROBO3
UBE3A
BVES
BBX
GOT2
MRPL42
DSTYK
ZKSCAN4
ZNF443
TRPC6
PNP
ZNF785
DGKE
C17orf67
PKP4
CCDC148
TMC7
TEFM
IFIT5
NMI
CDCA7L
TMTC3
CEP290
DHX15
TBRG1
PTGFR
ZNF717
TACO1
RPS15
FAM53C
CDC25C
ADRM1
ITPR2
ZBTB17
KIAA2026
MYLIP
PFKM
PTPRN
SF3B5
LTBR
CRADD
ERO1B
C3orf14
AGPAT4
FAM167A
ZNF18
LRRC58
HK1
MND1
PTPA
CRAT
PKN3
KLHL7
TOM1L2
DRC3
NOD1
ZNF765-ZNF761
ZNF765
REXO4
RFC4
PDIA5
CD302
HIF1A
UAP1
ORC2
MCM6
PARP8
RSPH3
HLTF
SLC3A2
CHERP
PCDH9
TBC1D4
ZNF326
KIF2A
SAYSD1
GPR37
PCTP
ULK4
RPS3A
GPN1
CCDC121
VANGL2
TMEM120A
MAN2C1
GRIA4
DTX2
SPR
RUVBL1
EEFSEC
PHYH
SLC35B4
MTMR3
ALDH7A1
RBM6
ST20-MTHFS
GPR63
MANBA
RNF34
ZUP1
TRNAU1AP
ELAC1
ARHGEF7
PANK1
TMEM43
CHCHD4
CNOT3
ZNF32
ZDHHC20
PRTG
PGM2L1
ALG6
BBS7
KLHL20
ACER2
FBXL20
OPTN
CCDC3
MSH6
INTS8
NAP1L1
DPYSL3
CFAP298-TCP10L
CFAP298
EAPP
SH3RF2
G3BP2
FAM13C
LRP12
USP13
LMF1
DNAJC3
CCN3
CTBS
ARL8B
SNX14
TMEM254
GMCL1
SLC35B1
TERF1
TFB2M
CNST
APOBEC3C
ANXA4
AGPAT5
SLC16A1
FBXL17
ADAMTS7
YTHDC1
SLC25A13
OMA1
DAB1
TNFRSF21
DSCC1
TMIE
PGM2
LRIF1
SMG7
CAVIN3
ALS2CL
UQCC3
PCGF6
LBHD1
CDKN2C
UBE2L3
KCNAB2
SPATA5L1
GATM
ZNF780A
RNF6
SOX15
RIMBP3C
RIMBP3B
COX14
HACD2
DDAH1
MACIR
NOTCH2NLC
WASF1
HSPA6
ZNF91
EIF3J
NKX3-1
TP53I3
ZNF200
PIGO
CCNG1
FECH
COPG2
MPC1
POLR2M
B3GALNT1
ZNF738
LSS
NDUFAF1
FRZB
FIS1
C14orf39
PDHX
APIP
USP33
CLPX
CYSTM1
TMEM231
PAF1
INPP5K
FBXO31
ADCY6
KIF3A
XPC
LSM3
HINT3
MESP1
TMPPE
GLB1
SLC9B2
UFL1
GCDH
NPY1R
PIGF
CRIPT
ZMYM6
PSMB8
PSMA6
NME9
NFKB2
AOX1
TM2D3
PPM1A
SCAF8
PFDN4
UBE2D1
SIAH2
RAD51AP2
STK32C
LAMA2
ACAP2
ABTB2
H4C6
HERC4
ZNF497
TRIM37
TM9SF1
SRSF1
NEDD9
FER
DNAJC25-GNG10
DNAJC25
HBEGF
C9orf85
ABHD17B
GFOD1
TMEM50B
IL6R
TMEM220
FGF9
RPS4X
UTP3
RNF141
WDR59
TUBA1A
TRIM26
CSNK1D
LOC100287896
LIPT2
URB2
TAF5L
RNF38
UROS
BCCIP
NOTCH2NLB
PLK2
DGAT2
GNG11
NUP35
ZNF518A
TMEM168
ACP6
CEP85
PLGRKT
CMTR2
TMEM116
HAT1
ERP29
COX6C
CPEB2
SLC25A46
GUF1
GPI
COX5A
KLC2
UMAD1
TAPBPL
SPAST
ITPKB
C1QTNF6
CIZ1
FKBP9
SNED1
DNM1
SMPD2
PPIL6
SC5D
SCAND1
GLYATL1
DCAF12
MPHOSPH8
CNEP1R1
ZNF287
ZNF264
TNFRSF14
TGFB1I1
DENND1B
IFNAR2
PLPP1
SP7
SEPTIN7
EIF3M
EXOC5
AP5M1
ASCL5
PA2G4
HSPA4
EIF4E
BTBD8
AATF
SVIL
UBQLN1
C2orf69
CXADR
MAFB
NUDCD3
FIP1L1
RALGAPA1
SPRYD7
PDIA3
SORD
ZNF671
ZNF101
TMEM243
PNPLA6
GPR155
PDK1
CASD1
SMAP1
UBE2L6
DTNBP1
FAM217B
TDP2
ACOT13
SYCP2
SLC35A1
ZNF346
BMERB1
PCMTD1
TACR1
ZNF611
MFSD5
ITGAV
RELA
CAMTA1
PDIA4
AKAP13
PIK3R1
SPAG9
SELENOI
ADGRF3
DDX18
EPB41L5
DYNC2H1
RBP1
STARD4
SLC9B1
SH3BP5
GPR137B
UBE2Q1
RNF150
RABIF
DCAF10
NOL7
FRMD5
SLC16A13
VSNL1
CTNNAL1
ECI2
NBPF12
AKAP9
AGL
TMEM192
OXA1L
NSUN4
UVSSA
XYLB
AHR
ANKRD9
ADAM15
ATG10
UBA5
ACAD11
POLR3F
DZANK1
TMEM109
CCDC38
AMDHD1
HSP90AA1
FAR1
DERL1
ACOT6
ZNF670
H2BC21
H2AC20
NME6
MARCHF5
CPEB3
WDR20
SMC3
YRDC
C1orf122
SEMA4B
PPM1B
PIP4P2
SETD9
RPRD1A
RFC3
EIF3A
TENT5C
EEF1AKMT1
SCP2
GULP1
TTC32
UBR2
STX4
PTX3
LRP8
AGK
CAPN7
SLC15A4
ARMH3
SLC25A21
SCLY
NCBP3
LCMT2
ADAL
STBD1
EVA1A
ZNF408
METTL23
JMJD6
ARHGAP1
ARF3
GNG12
ZNF592
ANKAR
DNAAF2
LEKR1
WDR47
ARHGEF26
ABCD4
MAP2K1
KIF23
ADA
WDPCP
MDH1
NAGPA
LCA5
CAMTA2
NIPSNAP3A
ALG1
PCGF5
SLC37A2
ZNF780B
SLC2A4
HRH1
RICTOR
C1orf21
FAM8A1
FAM98C
LGALS8
C6orf136
HECW1
ADK
ACY1
TMEM245
MRTFB
GOLM1
EFCAB13
CD46
SMPDL3A
STEAP2
TRIM27
ZFAND1
ABR
FLT1
CDK9
CTNNA1
SH2D5
CPLX2
ZNF724
ADAMTS15
FNBP1L
CRELD1
MIIP
NAA30
TDP1
ARHGAP31
PPM1D
EFCAB11
CCDC88A
FOXJ3
PRKAR2A
TLK2
ZNF343
SOCS7
SLC35C1
NRL
PCK2
FAM47E
FAM47E-STBD1
SNAPC3
STXBP3
TMEM160
ZNF212
NXPH3
C1orf216
HMGN3
TSPAN18
NDUFAF2
ERCC8
ZNF600
HACE1
KIDINS220
DIPK2A
TEX10
SFXN5
UNG
GNAI2
PEX16
SYT7
MCU
NAA25
DEDD
KATNBL1
COQ2
STK17A
EPHX1
NREP
ZNF341
MXI1
JRK
ANKRD40
KDM3B
RNF220
ZNF860
OSBPL10
RHOB
SLC39A10
NUDT4B
ZSWIM6
TMEM71
PHF20L1
KANSL1L
BCAR3
CNIH1