ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX235054 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◣ SRX235054: U2OS

◢ CLOCK: STRING

AGAP11
PLD6
GET4
NKIRAS1
NR1D2
RALGDS
COLEC11
DBP
TMEM114
G3BP1
PER2
MTHFD1L
CAMKK1
CDK4
CRY2
PIP4P2
EIF5A2
ANKRD12
YPEL5
FNIP1
AVPI1
TSPAN4
CLN6
TFDP1
SLC25A13
CPEB1
VPS26A
RORC
ATXN2
MRPL40
HIRA
RNMT
FAM210A
SLC35A5
ATG3
HERC3
LAMP1
ISOC2
CASC3
TEF
KAT5
HIF1A
PUM2
SNAP29
PI4KA
MDGA2
GGA2
ZNRF2
LRFN4
CORO7-PAM16
CORO7
NPTN
COPS7A
PINX1
TMEM116
ERP29
OGDH
MXI1
SPATC1L
CRY1
THNSL1
HPS5
GTF2H1
TRIM8
TBCEL-TECTA
TBCEL
KHDRBS1
LGR6
C7orf57
GYG1
PDP2
TMEM185B
CLUAP1
SPG21
PHF20
ARL4A
TRAPPC2L
GALNS
GGT5
AMZ1
PIP4P1
ILVBL
MRPL36
MARCHF8
BHLHE40
PALD1
DIXDC1
OSGEP
APEX1
ZBTB37
ZNF706
LARP1
RASD2
PMS2
AIMP2
CCDC85B
KRTAP2-1
TBC1D3L
TBC1D3D
TBC1D3C
TBC1D3
ILF3
DDX5
TRAPPC6A
BLOC1S3
COMMD8
GBE1
FLCN
CUTA
HDAC4
AATF
KRTAP4-11
SOX12
TBC1D3H
TBC1D3G
MC3R
CSRNP1
PCGF1
CLCN7
ZNF331
NAPA
KRTAP4-12
SERF2
KRTAP4-4
COX14
CNNM2
MTHFR
CLCN6
TBC1D3I
L3HYPDH
JKAMP
KISS1
MAP2K7
TKTL1
TEX28
CNDP2
RRAGC
CHKA
RAD50
USP36
WTAP
SOD2
KRTAP9-8
GLI2
FAH
PPAT
PAICS
AGO1
SCN5A
PDE1B
ITGB2
POTEH
MAPK1
CIPC
UBE2Q1
NPM1
BHLHE41
SCAP
SIRT1
SCAF11
LDHA
KRTAP9-4
IER3
ACY3
KRTAP9-7
CEP72
DEPTOR
TXNIP
PC
AIG1
MAT2A
KRTAP2-3
CGREF1
ADK
TMEM204
LDHB
DACT3
SLC25A38
EIF4A3
TBC1D3K
TBC1D3F
SNX8
N6AMT1
KRTAP9-2
ARHGAP39
ACAD9
KIAA1522
RTN4R
CD7
GOLIM4
KRTAP2-4
HK2
MTRNR2L8
ZFP91
NLK
RIMBP2
LOC100996750
KRTAP4-7
PAPLN
SQLE
SPRING1
RNFT2
MARS2
FRMD1
HAGH
FAHD1
KRTAP10-5
ARRDC4
NUDCD3
RELL1
ZNF74
MGAT3
KRTAP4-8
CTSH
TBC1D3E
GTF3A
USP32
UBE2QL1
KRTAP9-6
NUP188
DOLK
HGC6.3
CAD
TMEM248
KRTAP10-6
ZCCHC7
HOXA3
TDRD15
C3orf70
AJUBA
PDE4A
KRTAP2-2
KRTAP10-3
UBAP2L
C1orf43
ERRFI1
MARVELD1
SLC16A1
NOL8
CENPP
RELT
SPACA3
LPAR6
B3GNTL1
SHTN1
KRTAP10-7
ZSCAN22
KRTAP4-1
RUBCN
FYTTD1
PRLH
ASPH
CISD1
NPEPL1
KRTAP10-4
KRTAP10-1
NAB2
ZNF566
KRTAP9-9
CALN1
SHANK1
CIART
NR6A1
SNRPE
NR1D1
RAD9A
PFDN4
PER3
LRRC56
PTBP1
OSGIN1
BCAS3
MAPK6
PLEKHF2
RNF43
HOXC13
TRIM37
CSDE1
LNX1
FAM76A
HOOK2
ERCC6L2
ZNF292
STX4
UVRAG
SLC20A1
ARFGEF2
VPS11
UBE2B
CDKL3
EMC2
RNASEK
AP5Z1
DAZAP2
CDK12
DDX42
CCDC47
WASHC2A
PPP1R3C
S100A13
CHTOP
HES4
SNRPA
C19orf54
DENR
APPBP2
LRATD2
PHKG2
INAFM1
PPM1D
PNPLA7
RFESD
EIF3B
SLC33A1
RPUSD4
FAM118B
WASHC2C
FAM117B
CREBRF
MORF4L1
IFRD2
ALG13
CCDC24
PRDX6
SRP54
UTP18
MBTD1
CEP63
ANAPC13
SLC35B2
SPNS1
WDR62
THAP8
KMT2E
PRORP
PPP2R3C
GMFB
EPC1
MAPK1IP1L
NCOA3
NME1-NME2
NME1
BRIP1
PRKAR1A
TIMM22
SDR39U1
ZNF438
HBP1
DPP3
SRSF1
GTF2A1
ZNF263
TRMO
ATP6V1H
TRIQK
ADNP2
RCCD1
NFX1
XPOT
CSTF1
AURKA
COQ10B
HMGB2
GSK3B
TOB1
SLC25A36
SRSF5
MAP4K1
EIF3K
THOC7
ATXN7
PRPF3
CHFR
TMEM18
CLTC
PSMD5
PPP1R3D
IP6K1
FAM217B
GCDH
TUBD1
RPS6KB1
FAM214A
TCF25
TPD52L2
PER1
CCNL1
ARRDC3
RAB17
MEA1
KLHDC3
NEURL2
CTSA
DHPS
PDE12
PTCD3
POLR1A
SRCAP
LOC730183
SENP8
MYO9A
EPM2A
NRAS
CLN3
SEPTIN2
HDLBP
MADD
RMND1
ARMT1
THAP5
DNAJB9
PAF1
SUMF1
KDM4C
NBN
RNF13
COL6A1
STAT6
ZNF687
ZC3H4
EIF1
HNRNPF
NAA50
EED
ATP6V1A
ATP6V0B
RMI1
HNRNPK
FZD1
BCLAF1
BLVRB
POLI
MYL12A
RPS11
TM9SF1
G6PC3
HEXA
CENPN
AKT1S1
ZZZ3
RRAGB
COMMD9
EIF4B
PPFIA4
H2BC12
H2AC12
HSF2
MVB12A
PSMD6
NTMT1
HCFC1
MTCH2
NFYC
UCP2
SPTBN4
ARIH1
CHMP2B
EPB41L4B
TBC1D17
CD164
UNC13D
MED13
PNO1
SLC35C2
RFX3
SETD1A
MRPS23
UNK
ZCWPW1
MEPCE
HSPBAP1
SULF2
SLC25A26
PARD6B
DHX40
NOP14
GRK4
BRPF1
TMEM141
FNBP4
SLC3A2
DGAT2
SNX5
MGME1
SLC25A25
NAIF1
CDIPT
LAMC1
TENT5B
UCKL1
ATG101
YEATS4
ISG20
HNRNPA2B1
CBX3
ZNF335
SRP9
MCM7
BAX
AP4M1
TIPARP
EXOSC5
BCKDHA
RNF223
KLF11
DHODH
HNRNPH2
CFAP251
RPSA
PRKCI
GABPB2
EIF4A1
CAP1
ESYT3
RBBP5
ITGB1
CCDC107
PPP4R3B
CLN8
TUBA1B
VPS33A
PDXDC1
MAL2
SLC35A4
POLR1D
LNX2
KAT7
APBB3
CENPA
H4C15
H4C14
ENSA
TCERG1
CLK1
TUBA1C
GREB1
TMEM53
SYNCRIP
ARMH1
DDX3X
MOCS3
MAX
DPM1
CTDSP2
CD55
SREK1
KLHL12
STXBP4
COX11
CCDC114
RNF139
RBBP6
YARS1
S100PBP
MMADHC
MZF1
WDR89
YWHAZ
ZFP1
SLC43A2
PCBP1
DDX59
TRIP6
TBC1D13
SKA2
PRR11
SPPL3
VMP1
PTRH2
NR1H2
TADA3
ARPC4-TTLL3
ARPC4
SLC39A6
CD2BP2
ATIC
XRN2
THRAP3
SLC25A24
RLF
CYB561
RPS29
EIF4G1
RRAS
PPM1A
TMEM187
INO80
EIF5
TMCC1
PPP1R13L
POLR1G
SLC25A11
RNF167
HEXIM2
EIF4A2
DLX4
ECH1
SPATA2
PRC1
TUFT1
DFFA
CALM2
ZNF84
FBXO5
LUC7L2
STAM2
TJP2
STMN1
BCL6
PIGO
MLH1
EPM2AIP1
LPXN
KPNA2
TBC1D15
BCAS4
SLX1B
SLX1A
BOLA2B
BOLA2
TSTD2
NCBP1
SGO1
AMDHD2
UBR5
SMARCD2
ZNF219
PDCD6IP
PTP4A1
GART
DDX43
PPIA
STX6
NSUN3
DHFR2
PRKDC
MCM4
GPBP1
FAM53C
CDC25C
COX19
SLBP
TRMT112
PRDX5
USP9X
TRIM59
ANAPC7
SLC25A19
PIGW
MYO19
EIF3E
TATDN2
TARDBP
HIRIP3
UBQLN1
HNRNPA1
CBX5
SCAF1
SLC2A4RG
RBM3
PPP2R5C
PABPC1
ZFP62
USP48
MTDH
FBXL18
RNFT1
PSME3
MED26
DPH1
NAMPT
AEN
JUNB
FBXO33
TUBGCP5
HES1
FBXW4
DNAJB1
PAK1IP1
LAMTOR4
C6orf52
TRA2A
ADGRE5
OSGIN2
NAA38
HNRNPC
CYB5D1
ATF7-NPFF
ATF7
RIPK2
UQCRC2
ALDOA
PCNT
C21orf58
AP1G1
TBX2
SIRT4
CACYBP
PRMT2
MCCC1
IREB2
DDX23
PCIF1
STX16
ERGIC2
LRCH4
FBXO24
CYTH2
BOLA2-SMG1P6
TMED10
DCBLD1
ZNF217
CCDC86
POLR2J3
WDR6
PES1
ZNF384
WDR74
MTRNR2L2
FAF1
MYL6
U2AF2
PLEKHG2
BCL9L
SRRT
SPTSSB
LTV1
SMG9
SERINC3
PGP
RNF31
PSME2
FAF2
ARF6
HSPH1
SETDB1
PHF12
HSF1
BOP1
DUSP1
PPP1R15A
SLC35B1
MBNL1
OGFOD2
TANC2
DARS1
TRA2B
TOP3A
SMCR8
TFAP2C
SPAG9
KIFC1
TAGLN2
TEX14
RAD51C
PSMC5
FTSJ3
KHSRP
STK35
CHMP3
GMNN
CYC1
HNRNPD
MXD3
AHI1
TREX1
SLC49A4
MICU1
TIPIN
KIAA0895
DNAJB5
ANLN
ZBTB7B
PIK3R3
RITA1
OSBPL1A
DDX54
KPNA3
SRSF4
RRP9
PARP3
CCDC6
LAMTOR1
SPATA17
NOP58
HNRNPH1
GPATCH2
METTL23
JMJD6
ELOB
APH1A
TIMM44
ZNF24
SOCS5
PNISR
DUS3L
ZNHIT1
PLOD3
METTL1
EEF1AKMT3
DNAJB12
TSPAN31
NPC1
NCAPD2
MRPL51
DVL2
RABGGTA
PNPO
EGR1
PPIL3
NIF3L1
RPS19
MRPS18B
SYNRG
TMEM251
MOAP1
DDX6
PPP1R15B
JADE2
CIC
SLC25A10
PAIP2
SERTAD3
TNFRSF12A
TET3
SENP2
HNRNPA0
C17orf58
ZAR1L
FAM86B1
BRCA2
MAF1
DYNC2I2
CC2D1B
SUPV3L1
SF3B4
CANX
COPS3
BRD2
TOR1AIP1
ZC3H11A
SESN1
IQSEC1
DDTL
DDT
DDIT4
CEP57L1
SARAF
CREBZF
ALOXE3
RPL27
MED1
CHD1
KRT80
KMT5C
LRPPRC
GOLGA5
SAE1
LYRM1
DCLRE1B
BFAR
AP4B1
HIPK1
PPP5D1
PDPR
CALM3
GABPB1
SLC35E2A
LIN54
TAX1BP3
EMC6
SERPINE1
MDM2
PDIA4
GPRC5A
RSRP1
GNB2
C3orf14
FMC1-LUC7L2
FMC1
TBL1X
SYT1
UBE2M
AMOTL2
SMC4
IFT80
ARF3
ZNF57
NCL
CBLL1
ZBTB8OS
RBBP4
ORC4
MBD5
DUSP7
NOCT
NAT10
DOP1B
ZNF286A
SLC30A1
C15orf39
PLK4
PMEPA1
RBM8A
NQO1
RPL10
TOR3A
ETF1
TSPYL1
NOL11
DSE
C1orf174
ATP5MC1
UBE2T
C5orf51
C14orf93
STAG2
MBTPS1
CEP152
UBC
TAF9
RAD17
LRP10
ATP6V1G1
AK6
ANKFY1
PPP4R3A
PKNOX1
ITPRID2
GNA13
DUSP28
ANKMY1
MTMR14
LONP1
CATSPERD
SRSF7
RSL1D1
DMTF1
TNPO2
ZBTB21
PPP2CA
PMVK
KIF22
GABPA
FUBP1
DNAJB4
ATP5PF
FANCC
RBM15
NCBP2AS2
NCBP2
ZBTB10
WDR81
ST20-MTHFS
POP7
H3C15
H3C14
H2AC19
H2AC18
SBDS
PSMD9
OPLAH
HPD
VAPB
CNPY2
SRSF6
RCE1
MFSD4B
CAMLG
BRWD1
ZNF778
RNH1
DCUN1D3
ZZEF1
ICAM5
CYB5D2
TSC22D1
PHC3
TRIM52
PNRC1
FOS
TIMM9
KIAA0586
TMEM151A
TAF7
STK40
BCAS1
HPSE
GNAS
UBE2D3
TPT1
DOK7
TDRD1
SLC39A4
LOC114841035
FKBP2
LEKR1
HSPA9
MED15
COQ7