ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457524 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◣ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

GET4
CDK4
KAT5
CRY2
CIART
AGAP11
PER2
DBP
PLD6
CRY1
CLUAP1
RORC
NPTN
PIP4P1
RAD9A
SNRPE
SLC35A5
ATG3
TRAPPC6A
BLOC1S3
HOXC13
RALGDS
COMMD8
TEF
NKIRAS1
NR1D2
NR6A1
LAMP1
KHDRBS1
TMEM116
ERP29
MAPK6
RNF43
ZNF292
PFDN4
LRRC56
NOL8
CENPP
PTBP1
VPS11
HPS5
GTF2H1
YPEL5
ANKRD12
OSGEP
APEX1
EIF5A2
NR1D1
HOOK2
PLEKHF2
UVRAG
SPG21
LNX1
UBE2B
CDKL3
CLCN7
TRIM37
EMC2
CLN6
AP5Z1
WASHC2A
ARFGEF2
STX4
MAP2K7
MTHFR
CLCN6
BCAS3
RPUSD4
FAM118B
TXNIP
FAM76A
RNASEK
CSDE1
OSGIN1
WASHC2C
HES4
TRMO
APPBP2
SNRPA
C19orf54
VPS26A
HIF1A
MAP4K1
EIF3K
GMFB
COMMD9
B3GNTL1
SLC20A1
SPNS1
ARRDC4
CHFR
RAB17
USP32
ISOC2
PNPLA7
IP6K1
ZNF331
MEA1
KLHDC3
WDR62
THAP8
SLC35B2
RFESD
NME1-NME2
NME1
PRDX6
LRATD2
AVPI1
DAZAP2
RRAGB
MAPK1IP1L
CREBRF
ATP6V1H
UBAP2L
C1orf43
PRKAR1A
HBP1
ALG13
SUMF1
NEURL2
CTSA
SLC33A1
EPB41L4B
TRAPPC2L
GALNS
UTP18
MBTD1
CAMKK1
G6PC3
RMND1
ARMT1
THAP5
DNAJB9
BLVRB
SPTBN4
GTF3A
PMS2
AIMP2
GCDH
FAM117B
ZNF438
CCDC85B
UBE2Q1
LAMC1
PER1
STAT6
RIMBP2
ZC3H4
HEXA
ZNRF2
CLTC
ATP6V0B
TCF25
IFRD2
SLC25A13
PPP1R3C
TIMM22
CCDC24
H2BC12
H2AC12
DHODH
HERC3
CLN3
ILF3
ZBTB37
GTF2A1
LRFN4
GYG1
FAM214A
ZNF706
PPFIA4
HNRNPH2
STMN1
DDX5
ADNP2
FNIP1
MAX
KLHL12
JUNB
KMT2E
SCAF11
PER3
SERF2
TMEM151A
G3BP1
ATXN2
SGO1
POLI
PPM1D
DPP3
CEP63
ANAPC13
NBN
PSMD6
TBCEL-TECTA
TBCEL
GSK3B
PPAT
PAICS
DDX3X
TANC2
SLC25A26
XRN2
UCKL1
RPSA
PDE12
NUDCD3
CSTF1
AURKA
BAX
IQSEC1
NCOA3
SMARCD2
NTMT1
PHKG2
EPM2A
PAF1
VPS33A
PC
CLN8
SNX5
MGME1
DGAT2
RPL27
TRIQK
DPH1
ATIC
UBR5
TENT5B
S100A13
CHTOP
MORF4L1
MVB12A
RNF13
CUTA
COQ10B
CHMP2B
EXOSC5
BCKDHA
YWHAZ
CFAP251
TBC1D13
PABPC1
DHPS
LARP1
ESYT3
TDRD1
SEPTIN2
HDLBP
SLC43A2
FLCN
AKT1S1
TBC1D17
SENP8
MYO9A
RNF223
BHLHB9
ERCC6L2
ZZZ3
ZNF84
MADD
CNNM2
SDR39U1
DDX42
CCDC47
MTHFD1L
RCCD1
SLBP
MCCC1
RRAGC
CCDC107
MYL12A
PCBP1
ADGRG7
COX14
SPPL3
SLC25A24
ZNF286A
PKNOX1
DDX59
EPC1
DACT3
HNRNPA1
CBX5
GOLIM4
ISG20
BCL9L
ZNF263
ADGRE5
SLC25A36
PRPF3
NAT10
STXBP4
COX11
AMDHD2
TBC1D15
GBE1
TOB1
MLH1
EPM2AIP1
CLK1
METTL1
EEF1AKMT3
RAB21
EIF4A1
CNPY2
BRIP1
C14orf93
PRORP
PPP2R3C
CD164
SETD1A
SLC39A6
MRPL36
KDM4C
ZNF672
PPP1R3D
FAM217B
FBXO5
HES1
TRIM8
SRP54
NFX1
USP36
EIF3E
BFAR
HSF2
NPM1
CYB561
GADD45G
HNRNPA0
AEN
DVL2
SLC25A10
C5orf51
TMEM141
ILVBL
STX6
CENPN
INO80
PDP2
SOCS5
SPATA2
DNAJB5
DENR
ZNF687
NAMPT
VDAC2
WTAP
SOD2
ALOXE3
CCDC86
RAD23A
TBC1D30
GNS
GGA2
PPP5D1
CALM3
C15orf39
NQO1
PUM2
RAD50
L3HYPDH
JKAMP
ZFP62
TUBD1
RPS6KB1
SULF2
SYNCRIP
MTCH2
PARD6B
TIPARP
TMEM53
ARMH1
SPAG9
KHSRP
NUP42
PPM1H
EIF1
RNF139
MTDH
GRAMD2B
TOR3A
THOC7
ATXN7
HDAC4
ORC4
MBD5
DLX4
ZBTB40
SRCAP
LOC730183
SLC35A4
APBB3
MRPL27
EME1
UCP2
HSPBAP1
USP9X
TCERG1
CYC1
THRAP3
TSTD2
NCBP1
STAM2
HSPH1
HNRNPD
CASC3
NEMP1
DNAJB1
CAMLG
ENSA
YARS1
S100PBP
OSGIN2
ARF6
NUP188
DOLK
DDTL
DDT
GPRC5A
TBCK
AIMP1
YEATS4
GABPB2
CENPA
BCAS4
TATDN2
UBE2I
NFYC
CSRNP1
OSBPL1A
METTL23
JMJD6
RBBP5
TOP3A
SMCR8
ZNF696
PDCD6IP
CCDC6
SSBP1
XPOT
PTCD3
POLR1A
MZF1
FAM86B1
TMEM18
WDR89
DFFA
PLEKHG2
SLC25A19
DCBLD1
ATG101
RLF
ICAM5
NOP14
GRK4
ADK
PAK1IP1
C6orf52
HOXB7
FAF1
CCNI
EIF3B
RMI1
HNRNPK
TAGLN2
SUPV3L1
HIPK1
NCL
PKN1
C17orf58
PDE4A
TMCC1
HPSE
IMMT
AMMECR1L
LAMTOR4
FOXRED2
INTS6
TM9SF1
SPTSSB
DUSP1
KPNA2
SOX12
TAPBPL
SYNRG
SLC30A1
ZNF219
ATP5MC1
NRDC
ZFPM1
TBL1X
SRSF5
UNC13D
TAX1BP3
EMC6
PPP2R2C
MAL2
FBXL18
PSMC5
FTSJ3
TNPO2
ATL2
ASF1B
BAHCC1
INAFM1
CCNL1
BCLAF1
CIPC
CC2D1B
EIF4G1
STK35
TIMM44
VMP1
PTRH2
LUC7L2
TARDBP
ZNF384
ATP6V1G1
SFSWAP
PRC1
MXD3
CCT2
TM2D3
SLC25A25
NAIF1
ITGB1
TAF9
RAD17
AK6
NUTM1
NOP10
EFTUD2
CCDC103
NAPA
NRAS
ZCWPW1
MEPCE
ZNF335
ASPH
TIPIN
TJP2
SIRT4
THNSL1
DHX40
FAM53C
CDC25C
NAA38
CYB5D1
ZBTB10
ERLIN2
MARVELD1
GTF2IRD2B
TMEM185B
CAP1
SREK1
PSME3
RSL1D1
IGSF9
ACAP2
SLC35C2
RFX3
GREB1
FBXO33
KCND3
KLF4
PDIA4
PTP4A1
HSPA9
ABHD6
SLC3A2
EIF5
COPS7A
MYL6
SRRT
FAM234A
APC
ARL4A
RRP9
PARP3
ADAMTS17
PITRM1
HNRNPF
EBAG9
PDK2
TMEM14C
LAMTOR1
ZNF57
SMG8
THAP6
GPRC5B
POLR1D
LNX2
CD2BP2
AIG1
PSMD14
BRPF1
MBNL1
TSPYL1
DSE
CDK5RAP3
NDRG1
AP1G1
RITA1
DDX54
DYNC2I2
CANX
TBCB
POLR2I
MARCHF8
CEP152
MPZL3
CNIH3
MFSD4B
SLC35B1
NOP58
DNAJB12
PTPN1
MRPL45
MSTO1
ALDOA
PSMD9
HPD
DOK7
LSR
MAN1B1
ANKHD1-EIF4EBP3
ANKHD1
PNO1
POLR2J3
DUSP28
ANKMY1
RBM22
PFAS
RHOD
ARRDC3
MED26
LTV1
ELK4
LPIN3
NADK
PDIA5
SRSF1
RNFT1
TEX14
RAD51C
PIK3R3
TFF1
FNBP4
PRKCI
C3orf14
RELL1
GABPB1
TMED10
PES1
CAD
LRP10
ITPRID2
CMTR2
UBFD1
EARS2
TXNDC12
BTF3L4
SMG9
EBPL
RNMT
FAM210A
FBXW4
PNPO
CASP7
EED
SRSF7
ATP6V1C1
ADGRE2
MRM3
GLOD4
PHB
BAG6
STIP1
PPARGC1A
RPS29
NOP16
HIGD2A
PLD3
C19orf47
LRR1
RBM15
RPF2
AKAP10
TOGARAM1
KLHL28
MED13
UNK
ZFP1
HSPA4
RBBP6
CACYBP
EIF3A
PPP4R3A
NCBP2AS2
NCBP2
COQ7
NRL
DCAF11
FNTB
OSBPL2
RTEL1
SETDB1
PDPR
SBDS
ARRB2
UFSP1
NAA50
ATP6V1A
DCLRE1B
AP4B1
VPS8
ABCA3
COL26A1
MRPL40
HIRA
ARIH1
KPNA3
LOC114841035
FKBP2
FAM227B
DTWD1
OBSL1
INHA
ZAR1L
BRCA2
GNA13
SRFBP1
NDUFAF4
KLHL32
PRMT2
DARS1
DOP1B
SNAI1
PDE7A
SEC11A
GART
SIVA1
CDK12
LDHA
ZBTB21
ASNS
LIN52
ALDH6A1
RHBDD1
HENMT1
RAD52
NIM1K
TREX1
GABPA
ATP5PF
TMEM184A
ADCK1
ATG16L2
CTDSP2
LDAH
NR4A1
TPR
ODR4
SRD5A1
HMGB2
STX16
MICU1
AFF4
CPEB4
ANP32B
GIPC1
CHD1
DCAF4
PRRC2B
EIF3H
TTLL4
GPBP1
VPS45
KRT80
UBE2D3
MCCC2
HCFC1
UBC
LONP1
CATSPERD
ABHD2
HMGCR
CHKA
TRMT5
SLC38A6
ABCF1
DDX39A
PGP
BHLHE40
SEC31A
ZNF195
ESYT2
TMTC2
NME2
EIF4B
CHMP3
TFDP1
ESRP2
WDR4
CDC25B
DDX43
SRP9
PPM1A
SIKE1
MDM4
CCDC97
PPP1R15B
HSP90AB1
PPP1R15A
CNOT2
PIGW
MYO19
ZBTB7B
TDRD5
EIF2AK3
SPOUT1
MKS1
HAGH
FAHD1
TUBA1C
HNRNPH1
TOR1AIP1
CREBZF
ZNF248
ITFG2
TPD52L2
PLA2G6
ETF1
TIMM9
KIAA0586
PMEPA1
HEXIM2
LEKR1
RBSN
S100A10
KRIT1
ANKIB1
ETS2
ESYT1
NANP
LYRM1
DCUN1D3
STRADA
LDLR
ZNF217
TDRKH
STK4
GPHN
TFAP2C
RIPK2
RAE1
ASGR2
GTF3C4
DDX31
VPS26C
ATP6V0E1
FUBP3
DDX18
ZNF207
ERAP1
MRPS23
UBE2R2
TWNK
MRPL43
NOL7
ZNF768
NUDCD2
HMMR
FBXO22
E2F6
WASHC4
NOCT
PPP2CA
CNBP
WDR74
NAV1
CPEB1
TKTL1
TEX28
PSMD5
SNAP29
PI4KA
COL6A1
FZD1
RPS11
CDIPT
HNRNPA2B1
CBX3
MCM7
AP4M1
KLF11
COLEC11
MTRNR2L8
PPP4R3B
TUBA1B
PDXDC1
KAT7
ZFP91
H4C15
H4C14
MOCS3
DPM1
CD55
CCDC114
MMADHC
TRIP6
SKA2
PRR11
NR1H2
TADA3
ARPC4-TTLL3
ARPC4
RRAS
TMEM187
PPP1R13L
POLR1G
SLC25A11
RNF167
EIF4A2
ECH1
TUFT1
CALM2
BCL6
PIGO
LPXN
SLX1B
SLX1A
BOLA2B
BOLA2
PPIA
NSUN3
DHFR2
PRKDC
MCM4
COX19
TRMT112
PRDX5
TRIM59
ANAPC7
HIRIP3
UBQLN1
SCAF1
SLC2A4RG
RBM3
PPP2R5C
USP48
TUBGCP5
TRA2A
HNRNPC
ATF7-NPFF
ATF7
UQCRC2
PCNT
C21orf58
TBX2
IREB2
DDX23
PCIF1
ERGIC2
LRCH4
FBXO24
CYTH2
BOLA2-SMG1P6
WDR6
MTRNR2L2
U2AF2
SERINC3
RNF31
PSME2
FAF2
PHF12
HSF1
BOP1
OGFOD2
TRA2B
KIFC1
GMNN
TMEM114
AHI1
SLC49A4
KIAA0895
ANLN
SRSF4
SPATA17
GPATCH2
ELOB
APH1A
ZNF24
PNISR
DUS3L
ZNHIT1
PLOD3
TSPAN31