ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359928 | LoVo
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◣ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

RGPD2
RGPD1
MTRNR2L8
MTRNR2L2
CRY2
PER2
AGAP11
DBP
CRY1
NKIRAS1
NR1D2
GET4
CIART
PLD6
TEF
KAT5
CDK4
NR6A1
CLUAP1
RALGDS
TRAPPC6A
BLOC1S3
NPTN
RORC
PIP4P1
SNRPE
ANKRD12
LAMP1
EIF5A2
NR1D1
NOL8
CENPP
RAD9A
SLC35A5
ATG3
PFDN4
YPEL5
TMEM116
ERP29
COMMD8
PER3
LRRC56
PTBP1
KHDRBS1
OSGIN1
BCAS3
MAPK6
PLEKHF2
CLN6
RNF43
HPS5
GTF2H1
CLCN7
HOXC13
TXNIP
TRIM37
CSDE1
LNX1
FAM76A
HOOK2
DDX5
GTF3A
ERCC6L2
OSGEP
APEX1
MTHFR
CLCN6
ZNF292
STX4
AVPI1
UVRAG
SLC20A1
ARRDC4
ARFGEF2
VPS11
USP32
UBE2B
CDKL3
EMC2
VPS26A
MAP2K7
ISOC2
RNASEK
HIF1A
AP5Z1
SPG21
DAZAP2
ILF3
CCDC85B
CDK12
DDX42
CCDC47
WASHC2A
PPP1R3C
S100A13
CHTOP
MTHFD1L
HES4
FNIP1
SNRPA
C19orf54
DENR
APPBP2
PC
LRATD2
PHKG2
SERF2
INAFM1
CAMKK1
TRAPPC2L
GALNS
PPM1D
UBAP2L
C1orf43
PNPLA7
MRPL40
HIRA
PMS2
AIMP2
G3BP1
RFESD
EIF3B
SLC33A1
SLC25A13
RPUSD4
FAM118B
NUDCD3
WASHC2C
FAM117B
ZNRF2
CREBRF
MORF4L1
IFRD2
ALG13
CCDC24
PRDX6
SRP54
UTP18
MBTD1
CEP63
ANAPC13
SLC35B2
SPNS1
WDR62
THAP8
KMT2E
PRORP
PPP2R3C
GMFB
EPC1
ZNF331
MAPK1IP1L
TMEM185B
NCOA3
B3GNTL1
NME1-NME2
NME1
BRIP1
CPEB1
PRKAR1A
TIMM22
SDR39U1
ZNF438
HBP1
DPP3
SRSF1
GTF2A1
ZNF263
RRAGC
TRMO
ATP6V1H
TRIQK
ADNP2
RCCD1
NFX1
XPOT
CSTF1
AURKA
COQ10B
HMGB2
GYG1
GSK3B
TOB1
HERC3
SLC25A36
TKTL1
TEX28
SRSF5
MAP4K1
EIF3K
THOC7
ATXN7
PRPF3
ATXN2
FLCN
CHFR
TMEM18
CLTC
USP36
GBE1
PSMD5
PPP1R3D
IP6K1
FAM217B
GCDH
TUBD1
RPS6KB1
LRFN4
FAM214A
TCF25
TPD52L2
PER1
UBE2Q1
CCNL1
DACT3
CUTA
ARRDC3
ZBTB37
RAB17
MEA1
KLHDC3
NEURL2
CTSA
DHPS
ZNF706
PDE12
PTCD3
POLR1A
SRCAP
LOC730183
PUM2
SENP8
MYO9A
COX14
EPM2A
SNAP29
PI4KA
NRAS
SCAF11
CLN3
SEPTIN2
HDLBP
MADD
RMND1
ARMT1
THAP5
DNAJB9
PAF1
THNSL1
SUMF1
KDM4C
NBN
GGA2
RNF13
MARCHF8
COL6A1
STAT6
ZNF687
ZC3H4
EIF1
HNRNPF
BHLHE40
NAA50
EED
ATP6V1A
ATP6V0B
RMI1
HNRNPK
FZD1
BCLAF1
BLVRB
PPAT
PAICS
POLI
MYL12A
RPS11
TM9SF1
G6PC3
HEXA
CENPN
AKT1S1
ZZZ3
RRAGB
COMMD9
EIF4B
PPFIA4
H2BC12
H2AC12
HSF2
MVB12A
PSMD6
NTMT1
HCFC1
TBCEL-TECTA
TBCEL
MTCH2
NFYC
CNNM2
UCP2
SPTBN4
ARIH1
CHMP2B
EPB41L4B
TBC1D17
CD164
UNC13D
MED13
PNO1
SLC35C2
RFX3
SETD1A
MRPS23
UNK
ZCWPW1
MEPCE
HSPBAP1
SULF2
SLC25A26
PARD6B
DHX40
RIMBP2
NOP14
GRK4
BRPF1
WTAP
SOD2
TMEM141
FNBP4
SLC3A2
DGAT2
SNX5
MGME1
SLC25A25
NAIF1
CDIPT
LAMC1
TENT5B
UCKL1
ATG101
YEATS4
ISG20
HNRNPA2B1
CBX3
ZNF335
SRP9
CASC3
MCM7
BAX
AP4M1
TIPARP
EXOSC5
BCKDHA
RNF223
KLF11
TRIM8
DHODH
HNRNPH2
LARP1
HDAC4
CFAP251
RPSA
PRKCI
GABPB2
EIF4A1
COLEC11
CAP1
ESYT3
RBBP5
ITGB1
CCDC107
PPP4R3B
CLN8
TUBA1B
ILVBL
VPS33A
PDXDC1
MAL2
SLC35A4
POLR1D
LNX2
KAT7
APBB3
ZFP91
CENPA
H4C15
H4C14
ENSA
TCERG1
CLK1
ADK
TUBA1C
GREB1
TMEM53
SYNCRIP
ARMH1
DDX3X
MOCS3
MAX
DPM1
CTDSP2
CD55
SREK1
RAD50
KLHL12
STXBP4
COX11
CCDC114
RNF139
RBBP6
YARS1
S100PBP
NAPA
MMADHC
MZF1
WDR89
YWHAZ
ZFP1
SLC43A2
PCBP1
DDX59
TRIP6
TBC1D13
SKA2
PRR11
SPPL3
VMP1
PTRH2
NR1H2
TADA3
ARPC4-TTLL3
ARPC4
SLC39A6
CD2BP2
ATIC
XRN2
THRAP3
SLC25A24
RLF
L3HYPDH
JKAMP
CYB561
RPS29
EIF4G1
RRAS
PPM1A
TMEM187
INO80
EIF5
TMCC1
PPP1R13L
POLR1G
SLC25A11
RNF167
HEXIM2
EIF4A2
DLX4
ECH1
SPATA2
PRC1
TUFT1
DFFA
CALM2
ZNF84
FBXO5
LUC7L2
PDP2
STAM2
RNMT
FAM210A
COPS7A
TJP2
STMN1
BCL6
PIGO
MRPL36
MLH1
EPM2AIP1
LPXN
KPNA2
TBC1D15
BCAS4
SLX1B
SLX1A
BOLA2B
BOLA2
TSTD2
NCBP1
SGO1
AMDHD2
UBR5
SMARCD2
ZNF219
PDCD6IP
PTP4A1
ASPH
GART
DDX43
PPIA
STX6
NSUN3
DHFR2
PRKDC
MCM4
GPBP1
FAM53C
CDC25C
COX19
SLBP
TRMT112
PRDX5
NPM1
USP9X
TRIM59
CSRNP1
ANAPC7
SLC25A19
PIGW
MYO19
EIF3E
TATDN2
TARDBP
HIRIP3
UBQLN1
HNRNPA1
CBX5
CHKA
SCAF1
SLC2A4RG
RBM3
PPP2R5C
PABPC1
ZFP62
CIPC
USP48
MTDH
FBXL18
RNFT1
PSME3
MED26
DPH1
NAMPT
AEN
JUNB
FBXO33
TUBGCP5
HES1
FBXW4
DNAJB1
PAK1IP1
LAMTOR4
C6orf52
TRA2A
ADGRE5
OSGIN2
NAA38
HNRNPC
CYB5D1
ATF7-NPFF
ATF7
RIPK2
UQCRC2
ALDOA
PCNT
C21orf58
AP1G1
TBX2
SIRT4
CACYBP
PRMT2
MCCC1
IREB2
DDX23
PCIF1
STX16
ERGIC2
LRCH4
FBXO24
CYTH2
BOLA2-SMG1P6
TMED10
DCBLD1
ZNF217
CCDC86
POLR2J3
WDR6
PES1
ARL4A
ZNF384
WDR74
FAF1
MYL6
U2AF2
PLEKHG2
BCL9L
SRRT
SPTSSB
LTV1
SMG9
SERINC3
PGP
RNF31
PSME2
FAF2
ARF6
HSPH1
SETDB1
PHF12
HSF1
BOP1
DUSP1
PPP1R15A
SLC35B1
MBNL1
GOLIM4
OGFOD2
TANC2
DARS1
TRA2B
TOP3A
SMCR8
TFAP2C
SPAG9
KIFC1
TAGLN2
TEX14
RAD51C
PSMC5
FTSJ3
KHSRP
STK35
CHMP3
GMNN
CYC1
TMEM114
HNRNPD
MXD3
AHI1
TREX1
SLC49A4
MICU1
TIPIN
KIAA0895
DNAJB5
ANLN
ZBTB7B
PIK3R3
RITA1
OSBPL1A
DDX54
KPNA3
SRSF4
RRP9
PARP3
CCDC6
LAMTOR1
SPATA17
NOP58
HNRNPH1
GPATCH2
METTL23
JMJD6
ELOB
APH1A
TIMM44
ZNF24
SOCS5
PNISR
DUS3L
ZNHIT1
PLOD3
METTL1
EEF1AKMT3
DNAJB12
TSPAN31
NPC1
NCAPD2
MRPL51
DVL2
RABGGTA
PNPO
EGR1
PPIL3
NIF3L1
RPS19
MRPS18B
SYNRG
TMEM251
MOAP1
DDX6
AIG1
PPP1R15B
JADE2
CIC
SLC25A10
PAIP2
SERTAD3
TNFRSF12A
TET3
SENP2
HNRNPA0
C17orf58
ZAR1L
FAM86B1
BRCA2
NUP188
MAF1
DYNC2I2
DOLK
CC2D1B
SUPV3L1
SF3B4
CANX
COPS3
BRD2
TOR1AIP1
ZC3H11A
SESN1
IQSEC1
DDTL
DDT
DDIT4
CEP57L1
SPATC1L
SARAF
CREBZF
ALOXE3
RPL27
MED1
CHD1
NAB2
KRT80
KMT5C
LRPPRC
GOLGA5
SAE1
SOX12
LYRM1
DCLRE1B
BFAR
AP4B1
HIPK1
PPP5D1
PDPR
CALM3
GABPB1
SLC35E2A
LIN54
TAX1BP3
EMC6
SERPINE1
MDM2
LDHA
PDIA4
GPRC5A
TSPAN4
RSRP1
GNB2
C3orf14
FMC1-LUC7L2
FMC1
TBL1X
SYT1
UBE2M
CAD
AMOTL2
SMC4
IFT80
ARF3
ZNF57
NCL
CBLL1
ZBTB8OS
RBBP4
ORC4
MBD5
DUSP7
NOCT
NAT10
DOP1B
ZNF286A
SLC30A1
C15orf39
PLK4
PMEPA1
RBM8A
NQO1
RPL10
TOR3A
ETF1
TSPYL1
NOL11
DSE
C1orf174
ATP5MC1
UBE2T
C5orf51
C14orf93
TFDP1
STAG2
MBTPS1
CEP152
UBC
MAT2A
TAF9
RAD17
LRP10
ATP6V1G1
AK6
ANKFY1
PPP4R3A
PKNOX1
ITPRID2
GNA13
DUSP28
ANKMY1
MTMR14
LONP1
CATSPERD
SRSF7
RSL1D1
DMTF1
TNPO2
ZBTB21
PPP2CA
PMVK
KIF22
GABPA
FUBP1
DNAJB4
ATP5PF
FANCC
RBM15
NCBP2AS2
NCBP2
ZBTB10
WDR81
ST20-MTHFS
POP7
H3C15
H3C14
H2AC19
H2AC18
SBDS
PSMD9
OPLAH
HPD
VAPB
CNPY2
SRSF6
RCE1
MFSD4B
CAMLG
BRWD1
ZNF778
RNH1
DCUN1D3
ZZEF1
ICAM5
CYB5D2
TSC22D1
PHC3
TRIM52
PNRC1
FOS
BHLHE41
TIMM9
KIAA0586
TMEM151A
TAF7
ACAD9
STK40
BCAS1
HPSE
GNAS
UBE2D3
TPT1
DOK7
TDRD1
SLC39A4
LOC114841035
FKBP2
LEKR1
HSPA9
MED15
COQ7
RELL1
MYDGF
GRHL2
XKR9
LACTB2
YY1AP1
DAP3
CBFA2T2
WBP1
RPF2
SYVN1
ZNF672
RPL15
RACGAP1
CSE1L
SMG8
KEAP1
THAP6
SLC35E2B
NPDC1
ATAD2
EBAG9
ZCWPW2
MPZL3
KLF10
AZI2
TMEM260
CCNB1
UBE2I
MARVELD2
FAM234A
MRPL27
EME1
NUP42
ERAP1
EIF2B5
ZBTB40
PTPN1
RGS9BP
ANKRD27
ZC3H6
STRADA
SSBP1
H4C11
WWOX
HNRNPDL
HARBI1
ESRP2
ENOPH1
ATG13
UTP11
TM9SF4
GPBP1L1
RAD23A
FAM86B2
UBA1
CMTR2
BUB3
NRDC
DDX19B
RNF6
IMMT
SPOP
POLD3
RIN2
CCT2
HOXB7
ANP32B
PLEC
KRT18
TMEM248
DIAPH1
TANK
IGSF9
GABARAPL2
PPIG
CUL5
ZNF696
CNOT2
ZBTB4
SEPTIN9
POLR2A
MTHFD2
LLGL2
ATL2
NRL
FUS
DCAF11
ZER1
ZNF274
RBM22
WDR25
WARS1
TTC32
LDAH
IRF2BPL
H2AC21
UBFD1
TBC1D30
NR4A1
GNS
ESYT1
EARS2
TRIM33
TMEM138
CYB561A3
MACROD2
ST6GALNAC2
ELK4
PTOV1
NUTM1
NOP10
GSPT1
JUND
SELENOW