ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457295 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◣ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CDK4
GET4
PLD6
KAT5
CRY2
AGAP11
PER2
CRY1
CLUAP1
NKIRAS1
NR1D2
CIART
DBP
RALGDS
PIP4P1
NPTN
RORC
LAMP1
RAD9A
TRAPPC6A
BLOC1S3
CLCN7
COMMD8
SLC35A5
ATG3
ANKRD12
CDK12
HOXC13
LRRC56
SNRPE
TMEM116
ERP29
NR6A1
KHDRBS1
DENR
MAPK6
TEF
GTF3A
PTBP1
RNF43
ZNF292
YPEL5
VPS11
NOL8
CENPP
AP5Z1
HPS5
GTF2H1
ARFGEF2
NR1D1
EIF5A2
MTHFR
CLCN6
WASHC2A
PER3
OSGEP
APEX1
PLEKHF2
STX4
UVRAG
FAM76A
UBE2B
CDKL3
HOOK2
PSMD5
ERCC6L2
RPUSD4
FAM118B
EMC2
VPS26A
LNX1
CLN6
RNASEK
SPG21
SLC35B2
SLC33A1
MAP2K7
TRIM37
TRAPPC2L
GALNS
OSGIN1
AVPI1
WASHC2C
SNRPA
C19orf54
IFRD2
TXNIP
IP6K1
ZNF331
HES4
PFDN4
BCAS3
MAP4K1
EIF3K
TMEM185B
ATP6V1H
ARRDC4
SPNS1
GYG1
RPS11
PPP1R3C
SERF2
WDR62
THAP8
PHKG2
PRDX6
TMEM18
B3GNTL1
UBAP2L
C1orf43
ISOC2
NOP14
GRK4
SLC20A1
ILF3
TUBGCP5
FNIP1
PNPLA7
SPPL3
MRPS23
TRIM59
HIF1A
GCDH
ZNF438
UBE2Q1
SLC25A13
KDM4C
TBCEL-TECTA
TBCEL
ADNP2
NEURL2
CTSA
SLC25A26
AMDHD2
GMFB
HERC3
COMMD9
ZNRF2
STAT6
CCDC85B
USP32
FAM117B
PMS2
AIMP2
CLN3
RRAGB
RAB17
PER1
PC
CREBRF
RMND1
ARMT1
DPP3
TIMM22
PDE12
BAX
TRMO
SLC25A36
EPM2A
CSTF1
AURKA
SLC25A11
RNF167
MTHFD1L
NUDCD3
CCDC24
SENP8
MYO9A
NME1-NME2
NME1
SUMF1
MYDGF
FZD1
CFAP251
GTF2A1
IREB2
LRFN4
CEP63
ANAPC13
TBC1D13
CAMKK1
ZZZ3
MED1
G6PC3
ZNF84
THAP5
DNAJB9
KLF11
HEXA
THRAP3
MACROD2
ATXN2
PUM2
DACT3
ATP6V0B
EPB41L4B
DVL2
ZNHIT1
PLOD3
LAMC1
TRIM8
AEN
HES1
DDX5
FAM214A
KLHL12
RFESD
SLC25A10
ZBTB37
MAL2
DFFA
UTP18
MBTD1
MTCH2
EIF4G1
CLN8
VPS33A
MAX
ZNF263
PPP1R3D
FAM217B
PPFIA4
AKT1S1
TBC1D17
WDR89
MVB12A
ISG20
ANKFY1
RNF223
BLVRB
SPTBN4
ADGRE5
COX14
OSBPL1A
HSPBAP1
SLC49A4
ZNF706
CUTA
MEA1
KLHDC3
ARF3
HNRNPH2
MTDH
CCNB1
GREB1
POLI
ASPH
INO80
HBP1
DHODH
ZC3H4
USP36
XRN2
SRP54
RIMBP2
GBE1
DLX4
SGO1
SLBP
CCDC86
SLC2A4RG
PSME3
RRAGC
POR
STRIP1
GGA2
STMN1
TJP2
GSTP1
STYXL1
YARS1
S100PBP
ESYT3
C1orf174
SCAF11
INSIG2
MAPK14
G3BP1
STXBP4
COX11
MRPL36
SLC35A4
APBB3
ALG13
RAD50
TBC1D15
NFX1
CNNM2
FLCN
EIF3B
H2BC12
H2AC12
DGAT2
CYB561
NAA38
CYB5D1
LTV1
EIF4A1
PABPC1
PRRG2
NOSIP
PNPO
SMARCD2
THNSL1
COPS7A
CBFA2T2
PPAT
PAICS
PDP2
TIPARP
C15orf39
HSF2
NTMT1
ATIC
SOCS5
ERGIC2
PIK3R3
CLTC
RNF13
ABCA3
NAT10
CD164
TDRD1
STX6
UBR5
DDTL
DDT
TMEM53
ARMH1
TOP3A
SMCR8
JUNB
CCDC6
TBC1D30
GNS
RBBP6
TATDN2
ZNF219
STX16
PRPF3
RRP9
PARP3
PPM1H
CHFR
NAMPT
DHX40
MFSD4B
RPSA
PDPR
EXOSC5
BCKDHA
CCDC107
ORC4
MBD5
UPF3A
DCBLD1
KPNA3
NSUN3
DHFR2
TIPIN
CIB3
SYNRG
PPP4R3B
PLEKHG2
CC2D1B
TRIP6
UCKL1
ADCK1
RC3H2
NCOA3
CENPN
SLC25A19
ZNF57
TENT5B
THAP6
CENPA
ALOXE3
DPH1
PDK2
KPNA2
HNRNPA1
CBX5
HPS1
TARDBP
APPBP2
UBN1
GLYR1
ALCAM
SLC39A6
GOLIM4
CAD
ARL4A
TANC2
NAPA
DEFB116
UCP2
IQSEC1
NUTM1
NOP10
TPD52L2
ATG101
TOR3A
ILVBL
CSRNP1
WDR77
ATP5PB
NFKBIL1
ATP6V1G2
PARD6B
HDAC4
MLH1
EPM2AIP1
C5orf51
TMEM151A
AIG1
CHKA
ATF7-NPFF
ATF7
PRKAR1A
MARCHF8
PSMD6
DDX3X
MRPS18B
LIN54
TBL1X
KCTD9
CDCA2
POLR1D
LNX2
ZFPM1
SCAP
PPM1D
SMG5
LAMTOR4
ACAD9
PTCD3
POLR1A
L3HYPDH
JKAMP
SPAG9
NUP188
DOLK
YOD1
ZNF286A
TNPO2
CMTR2
FBXO5
SLC35E2A
SNAI1
COX7B
MICOS10-NBL1
MICOS10
PNO1
ATP5MC1
WDSUB1
TRIB1
SAC3D1
MCCC1
BTBD10
PLD3
C19orf47
ADK
VMP1
PTRH2
TMEM248
MXD3
HMGN2
MYL12A
LAMTOR1
RCCD1
MICU1
PUF60
MRPL40
HIRA
ZNF778
RNF26
LONP1
CATSPERD
GIPC1
HNRNPD
SUPV3L1
DOK7
NCOA4
TET3
PLEC
UTP20
SIRT1
MRPL45
SF1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MTMR14
TIMM44
SOX12
ACAP2
FAM200B
SKA3
MRPL57
PSMG1
PFAS
METTL17
FBXO33
ATL2
ATAD2
WIPI1
SLC45A4
TSTD2
NCBP1
WASHC4
GDI2
NMRAL1
HMOX2
FAF1
AMMECR1L
MAD1L1
PDIA4
COLEC11
NRDC
ADGRE2
SNX8
TSPYL6
SAE1
SLC39A4
SETD4
RBBP8NL
SPTSSB
SH3GL3
PRORP
PPP2R3C
NRAS
ZFP62
TCFL5
PTDSS1
MTERF3
TTC32
NPM1
LPIN3
SRSF10
HSPH1
VPS8
ERICH6
ZBTB10
CDC5L
ATP6V1C1
BHLHB9
CCNA2
LARP1
TCERG1
GPHN
PPIA
FOS
SPATC1L
NADK
RGS22
KHSRP
PDXDC1
NOCT
CYC1
HPSE
DHDDS
DDX42
CCDC47
CDIPT
RAD23A
DOHH
DNAJB5
MADD
FNTB
LRP6
MDN1
PSMG4
LUC7L2
BCL6
PKNOX1
ZNF408
ARHGAP1
ERCC1
UGDH
WTAP
SOD2
CALM2
PGP
XKR9
LACTB2
FUBP1
DNAJB4
CAMLG
GPSM2
METTL1
EEF1AKMT3
DUSP7
TUBD1
RPS6KB1
RNF34
RAB40B
EIF3E
COL26A1
RBBP5
RPS29
MCCC2
PPP1R13L
POLR1G
RPL27
RNFT1
BCL9L
BRWD1
MET
CNPY2
AKAP10
PLK3
ZNF165
WDR25
WARS1
ARRB2
RPP25
PPM1A
ABHD2
C12orf45
FKBP4
LOC114841035
FKBP2
OSBPL2
CAMKK2
TMEM80
DEAF1
STAG1
ANKRD40CL
GFUS
COQ10B
PES1
STK35
RBM15
HOXB7
FOXRED2
UNC93B1
SLC36A1
ESRP1
ISCA1
PPARGC1A
METTL23
JMJD6
WWOX
ZNF248
TFF1
TTLL4
AHCTF1
RTEL1
ANKRD13A
CASC3
CANX
ITPRID2
RPS19
NAB2
BMP7
DUS3L
FAM86B2
NCAPG
SQLE
UBE2S
REXO4
FUS
UMPS
SLC25A32
DCAF13
UQCRC2
AFF4
CYRIB
ASB6
QRICH1
LRATD2
GNB2
SRFBP1
CCNYL1
EXOSC2
PCBP1
MRM3
GLOD4
MAN1B1
PAK1IP1
C6orf52
TAF9
RAD17
AK6
BHLHE41
BRIP1
DCLRE1B
AP4B1
ZER1
TTC7A
MCFD2
TSEN54
CASKIN2
SMG9
TPR
ODR4
CDKN3
ASS1
BTN3A2
SNAP29
PI4KA
HNRNPF
C14orf93
ATG16L2
WDR35
CSDE1
PMVK
SLC35E2B
OSER1
ABCF1
SYNGR4
PIM3
MACROD1
CABIN1
TAGLN2
ASNS
NUCKS1
PRC1
SLF2
TRPC4AP
MRPS2
C9orf116
SHMT1
RLF
RNMT
FAM210A
GRHL2
APC
FRAT2
ZNF696
LCORL
MMS22L
PRCD
SIKE1
SMG7
PDE4A
BFAR
DUSP28
ANKMY1
UBFD1
EARS2
ADGRG7
CKS2
ING5
ZNF239
TDRD5
CORO2A
SRCAP
LOC730183
LIN52
ALDH6A1
SLC2A8
DENND2C
CORO7-PAM16
CORO7
EBPL
RPS14
CASP7
DDX18
CDK18
SYNCRIP
THAP7
SETDB1
TBCB
POLR2I
SLC35C2
ZCWPW1
MEPCE
STK40
RAB3IL1
PTPN4
UBA52
RITA1
DDX54
C20orf27
TOP2A
PDIA5
SUPT5H
NBN
YTHDF1
TMEM14C
PPP1R3B
CENPF
PSMD9
HPD
PRRC2B
TTC39A
OBSL1
INHA
SURF6
NOL11
FAM174C
ASH2L
CPEB1
TMEM87B
MARVELD1
TWNK
MRPL43
SLC26A2
TRIP4
RCBTB1
NCL
NUP42
IGSF9
CNIH3
PRR19
PAFAH1B3
TEX14
RAD51C
POP7
BCAS1
MARVELD2
ZBTB40
ATP6V0E1
GOSR2
SPRING1
RNFT2
TADA3
ARPC4-TTLL3
ARPC4
LRRC8B
TRAPPC2
OFD1
SLC12A9
TCEANC
EEF1AKNMT
CDK1
TRAPPC9
TIMELESS
POLR2J3
RAB21
GRK2
SIX4
SERP1
EIF2A
HDHD5
SLC19A1
RGS9
CDH15
SENP2
TFDP1
GPATCH3
CCDC149
MCM7
AP4M1
MBNL1
BZW2
ANKMY2
VMAC
NDUFA11
PLEKHG6
EFCAB12
DDX43
TBX2
PPP5D1
CALM3
SPRYD4
UFSP1
SPHK1
NUF2
JADE2
HSPA4
RDH13
BHLHE40
LDHA
RELL1
TM9SF4
USP54
PRUNE2
AGBL3
CD2BP2
SLC38A10
PCTP
MZF1
LRPPRC
RBM8A
ADAMTS17
TJP1
UFD1
CDC45
HDAC2
ATXN7L2
CFAP410
CCNG2
MEMO1
TMEM260
HSP90B1
HP1BP3
ZNF335
UROS
BCCIP
EPS8
CLUH
CEP162
FAM156B
FAM156A
ZNF131
ELAC2
SCAMP3
UBALD2
TEDC1
YY1AP1
DAP3
NEK11
ASTE1
RAB7A
FAM227B
DTWD1
ZNF503
OXR1
HMGCR
SF3B1
ETS2
MAN2A1
SUPT7L
SLC4A1AP
SMG8
CDK20
EEF2K
CBX8
TRUB2
COQ4
CDC73
LINGO1
CST6
FUBP3
NOP16
HIGD2A
ARHGEF5
LRRC58
CNNM1
HNRNPA0
FAM234A
ARL6IP1
RPS2
CATSPERG
MRPL48
SAYSD1
LTBR
ZFP1
RSL1D1
TIGD5
EEF1D
C8orf37
YAP1
SCO2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ICAM5
LRIG3
NET1
SFT2D3
ANP32E
WBP1L
B3GAT3
MBTPS1
CEP152
GNA13
RGS9BP
ANKRD27
USPL1
HMGB1
POLR2H
DYNLRB2
GCLC
NSRP1
AKAP11
CDKN2D
RPF2
UFSP2
CLDN3
TRIM36
USP17L18
USP17L11
MAP7
ZNF687
SIRT4
FAM86B1
BAHCC1
RWDD1
ZNF529
PLK1
MMP16
CTHRC1
SLC30A1
LRP10
GADD45G
MDM4
RBSN
HCFC1
CD55
POLE3