ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741418 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◣ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

PTPRF
CCDC107
TBC1D4
MTRNR2L8
GTF2H4
ZMAT2
HLA-E
PSMB6
UBE2V2
ZNF335
PIH1D1
ALDH16A1
MRPL45
NEURL4
VPS37D
RNF24
OSCAR
NDUFA3
CYRIB
RNF216
PRMT1
MELK
AHCY
NLRX1
TOR1A
MTRNR2L2
NR6A1
CDK12
C19orf25
SMU1
STOML2
MRFAP1L1
TESK1
DLAT
RIN2
UBE2L3
KXD1
RAC1
ENGASE
RPS14
ARHGEF1
DPH5
NUDT9
FBXW5
C8G
PIGO
ZNF638
ZNHIT6
EPRS1
PAXX
UTP25
SMCO4
TOMM7
UBFD1
EARS2
XKR8
DRG2
EPS15
SLC29A3
ADRM1
WDR43
ZFAND1
UNC93B1
ZCCHC4
DNAJC19
CLPB
SMARCD2
AKIRIN2
KDM3B
SP2
DNM2
CTNNBL1
AARS2
CDC25B
PTK2B
UIMC1
MATR3
HEATR3
ZDHHC24
ACTN3
PTPN1
HAX1
SPATA2
SETD1A
EED
TKT
TENT2
MED23
CLTA
DYM
MLLT1
SLC25A16
MCC
PSMD4
MEGF9
RUSC2
PKD2L2
WDR74
ZDHHC12
TJP3
PRPSAP1
PDSS2
SLC31A1
FKBP15
SOGA1
ARHGEF39
FXN
EFR3A
SPAG8
SRRD
HPS4
ZCCHC14
HRCT1
COASY
AARSD1
SPAG4
ATG4C
TIMM10
RIF1
WDR59
LOC730098
FKBPL
PHKB
ITFG1
TPM2
NUP85
FKTN
RGPD2
RGPD1
NDUFS5
TMEM161A
CNOT11
CDK8
KDM1A
ZBTB3
OSGIN1
UBOX5
FASTKD5
ATF6
SPHK2
RPL18
TAF1C
ZNF131
TCIRG1
RCN1
GHITM
TFB1M
TLN1
CREB3
LTO1
TDRD7
LSM14B
CRLS1
SIRT5
DRAM2
CEPT1
SLC25A25
NAIF1
MRFAP1
CBX4
CLUAP1
PDCL
NELFCD
ST6GALNAC4
SLC35A4
APBB3
ELP3
GGCX
LMO7
UBE4A
PKD1L2
GABARAPL1
PAXBP1
PREB
TERF2
PLEKHG2
RPL6
CABLES2
SLC25A44
STAT3
ERCC6L2
EIF5A
CCNT1
SYNJ2
GSTA4
EIF3C
RIOX1
TRIP4
RPL13
SRPK1
SEMA4B
ADPRHL1
SH2B1
GLIPR1L2
VPS13B
KCTD18
TIA1
PCBD2
SYMPK
FOXA3
CCNC
HPS1
GPCPD1
PITPNA
DENR
ARNT
ADA
GRSF1
SYT7
CIAO3
NOL11
CWF19L2
IL11RA
DAGLB
PPP6C
KCTD2
ATP5PD
C9orf131
RPP25L
MAPK14
ZC3H15
SNU13
MRPL44
RAB5C
FOXK2
PDCL3
NCOA5
ARSD
LARP1
FAF1
TPK1
CDYL
CLK3
LAPTM5
PANK3
STXBP3
TRMT2A
RANBP1
TRMT1
NACC1
MRPL38
LDLRAP1
NUF2
HIBCH
GTF2H5
RBM4B
UQCR11
CACTIN
PDE4A
GABPB2
AP2S1
COX7A2
SLC38A10
PAK4
C17orf64
TOM1L2
DRC3
MRPL39
BRAP
ACAD10
RPL36
METTL14
SLC35B1
MRPL54
APBA3
SSBP1
PPP1R13L
FAM200B
LY96
AP3B1
COMMD2
MAP3K10
KIAA0895
ANLN
SARS2
MRPS12
GPSM2
PNPLA6
RAD52
CIC
PIP5KL1
NDUFS7
ICAM1
ZBTB45
ZNF184
HEXB
DSTYK
SGSM1
SLC30A6
EMC4
POFUT1
PLAGL2
GNE
POLG2
GALT
PCCB
FBXO27
CACUL1
DDX18
ICMT
ECSIT
RAB14
GSN
DPY19L4
LEO1
TRIB1
C16orf70
ISOC2
MRPL48
LYPLA2
PEX3
ADAT2
SWSAP1
SMNDC1
SMG8
ZZEF1
CYB5D2
TBPL1
NCBP3
CHST12
MFSD4B
ACOT9
FANCG
MARCHF7
PPP6R1
MVB12A
H6PD
MORC3
ILF2
DPP3
CEP164
NMRK1
ZNF70
TRIM26
E2F6
NDUFAB1
FAM98B
TOR1AIP1
CRTAP
CHMP6
LZTS3
ATG16L1
FAM168B
COMMD6
UCHL3
ATP6V1E1
TRAPPC3
CTR9
NLRP1
PSMD14
VPS37C
PPEF1
UPP1
PRXL2C
FBXO46
SLC44A1
MED18
SRXN1
USP45
TPP2
DYNC2I1
DCAF7
PTPN4
MAGI3
TIMM9
KIAA0586
TIGD1
EIF4E2
GADD45B
TIPARP
DMAP1
SMARCC2
REXO4
DMAC2
SMIM8
RFX1
TSACC
CCT3
MANBAL
ATP6V0E1
WDR70
C20orf27
PARG
KIF2C
GON4L
SYT11
FRA10AC1
NUCKS1
RAB2A
PCBP2
STX16
TCF3
DOT1L
ARMC7
SLC25A20
SHFL
TSEN54
CASKIN2
CCDC117
POU2F2
NFIC
USP35
KCTD21
WASF2
ASXL1
EMC8
COX4I1
TTC4
GRK6
TGFB1I1
ZNF77
RAB11B
VKORC1
RPS7
MTF2
ARFGEF2
DNAJC11
DARS1
HIPK3
KIAA2013
MEX3C
ABRAXAS2
ALG10B
RACK1
MRPL12
ZNF554
CALHM5
TCTN3
SCAMP4
ADAT3
GFPT2
PLEKHA7
KIF16B
KDSR
ARHGEF16
FAM220A
NKIRAS2
DNAJC7
DUS1L
CCDC22
ASF1B
RECK
ELMOD2
UBE3B
HPS6
KANSL3
RAB4B
TIMM22
TIMM23
SP1
TAF5
UNKL
PRDM8
GADD45GIP1
SPOCD1
ZNF606
EEF1AKMT1
TMEM242
MFAP4
BNIP1
FPR1
YIF1B
BRIX1
POLR2D
PIBF1
DIS3
DHX15
ARPC3
RPS12
VARS1
INTS12
GSTCD
PRRG2
NOSIP
ABT1
RNF114
SF3A3
ZNF256
CORO1C
CERCAM
CDA
CLCF1
RPL37
ZNF408
ARHGAP1
RPL24
SIRT4
LSM5
TK1
BCL9L
UNC13D
MRPL35
HINT2
UBE2D2
TRABD
PDLIM7
SBDS
BANP
NUMA1
LRTOMT
EHD2
BEGAIN
DEDD2
XPO5
POLH
COQ3
GRHL3
ZFAND5
RABGEF1
CYLD
CLPP
OPA3
RIN3
EIF5A2
TGDS
ZNF687
UTP3
SEC13
PLEKHM3
YTHDF2
NDUFS3
KBTBD4
ADAM19
PDE8A
SUGCT
MPLKIP
UBXN4
PPP2R2A
CDK5RAP1
GORASP2
MPC2
DCAF6
ZNF572
POLR1H
WDR11
TAS1R1
NOL9
RPS6
BRAT1
SNUPN
H2AC12
CDC5L
OPA1
RPS20
GPR160
ZSCAN25
NCOA7
S1PR4
HUS1
RBM12B
PRUNE1
MINDY1
TRIM59
PRDX1
H2BC10
ZSWIM3
ACOT8
FLVCR1
RBM7
C11orf71
ASMTL
FEM1A
DPY19L1
TCERG1
ZRANB2
WDR7
SNX12
SPRY1
ZFP36L1
GALNT10
ARHGAP24
CCDC43
ABCC3
SPTBN4
MKNK2
LUC7L2
FMC1-LUC7L2
VPS35L
MAP2K6
STAT6
TMCO4
SPATC1L
INO80C
COX5A
POLR1F
FUCA2
ACOT7
EIF3D
PTK6
ARL14EP
MTERF1
C6orf226
RPL37A
AMOTL1
CCDC42
CDK11A
TEAD1
VTA1
NMBR
CLIP2
PSMD9
HPD
ERCC1
H4C6
LITAF
PRKCA
TTC38
ARHGEF11
SCML1
ZER1
KDM4B
OMA1
DAB1
HSD17B11
ZNF330
AP2A2
TADA1
SYNGR2
COL18A1
MITD1
MRPL1
ENSA
RBBP5
SNRPC
PPAN-P2RY11
PPAN
SSBP2
CDAN1
MCIDAS
CDC42BPG
SRP19
CZIB
KIFBP
NEDD1
NPR2
TTI2
TCEA2
KLHL12
IPO13
TIMP1
SLC27A4
DEF8
USP42
MOSPD3
DSN1
PABPN1
ATP5IF1
PSMC3
DENND6A
GOT2
TUBE1
FAM229B
TUFM
SDAD1
TMEM184A
HSPA6
ZNF579
TRIB3
ROBO3
COX20
CARD14
ZCCHC3
CIZ1
H4C8
TBC1D19
CEP78
WDR75
PDE4DIP
COPS4
ACTL6A
MRI1
CDK9
ANKRD54
NAT10
NICN1
MTHFSD
LRRCC1
TACO1
IL1RAP
SH2D5
SAR1A
UBA52
UBE2R2
ST6GALNAC6
IFT46
CCDC97
PMM1
GNA13
LPIN3
CFDP1
THAP9
SEC31A
RAN
ETFDH
C4orf46
PRKAR1B
RAB5B
TPRA1
MCM2
CRK
SIGMAR1
TRAM1
ZNF234
HMGN4
RBM45
IFTAP
RHNO1
FOXM1
VPS53
RIC8A
BET1L
NEK6
HMGB1
MCM7
AP4M1
RPN1
USPL1
VPS16
PCED1A
PPP4R3B
ZSCAN26
RPL38
DENND3
IRF2BP1
HHAT
PRELID2
ZNF713
AMZ2
WIPI2
CTDSP1
NIPA2
DYNLRB1
C4orf48
CTPS1
VSTM2L
TMA16
MICALL1
MTMR14
FAIM
RBM12
CPNE1
FAM156B
FAM156A
SRP68
MEGF8
LGR6
DOLPP1
POLR3E
MUC1
PNISR
CDIN1
KANSL1
TMEM168
VCP
ELAVL1
EIF4A2
EP400
HERC5
PCNA
NDUFAF4
KLHL32
TMTC3
CEP290
MPRIP
GBA
MTBP
MRPL13
ABHD16A
RIPOR3
TRAF6
RAG1
NBN
MRPL3
YAF2
USP18
TIRAP
GTF3C3
COX16
LIMS1
PYCR1
EFEMP2
ZNF655
PIGL
LASP1
MYSM1
UQCRQ
GDF9
NCOR1
SYNRG
SIPA1L2
ANKRD40
CPPED1
ZNF609
GTF2H2
MTIF2
PAFAH2
ZNF3
ABCD3
GTF2H2C_2
ZNF577
EIF2AK3
RGL2
DHX16
RMND1
ARMT1
MYO1C
PPID
SERPINB6
RPAP1
SAAL1
KLF5
GOLGA7
GNAI2
SYT12
AP3S2
ALKBH3
TMPRSS9
CATSPERZ
PDCD6
PLEKHG4
TOR1B
TRIM45
SELENOH
MYCBP2
LIN54
PPP1R37
TBL3
RPS24
NANP
CIPC
SPRED2
EIF5
LINS1
ASB7
KTN1
AKT2
RPL10A
GTF3C5
ZDHHC6
VTI1A
SOAT1
STYXL1
GPATCH3
MTOR
FAM8A1
KLHL20
GORAB
ZNF790
ZBED1
DHRSX
MSC
PIGK
ANKRD36
GTF2H2C
UTP23
RPL35A
IQCG
INTS5
WDR76
ZNF444
AGXT2
DISC1
TBX3
SUMF2
NEMF
TMEM41A
REXO5
ERI2
MAD1L1
AFG1L
RPS11
XRN1
ZNF862
STAT5A
NBEAL1
TICAM2
MTFR2
PDLIM1
C12orf57
RNF207
TBC1D31
THEM4
FAM227B
FAAP20
DTWD1
STXBP4
COX11
TRAM2
LRRC34
EEF1AKMT2
BASP1
RPS16
MGAT5B
TMEM214
DCT
CDK20
CCZ1B
TSSC4
RPL26
COA1
NCOA1
MAFB
ZNF93
HNRNPA1L2
RFC2
XRRA1
SPCS2
HHIPL2
GIPR
B3GNT9
SH3GLB2
ELOVL6
RFX7
PIKFYVE
NOD2
PUF60
TTC30B
MAP3K3
ZNF555
SEPTIN7
CD2BP2
RCAN1
CCDC174
ZC3HC1
ZSCAN22
SLC26A11
SGSH
IL31RA
C17orf58
MARS1
PPIL3
NIF3L1
STARD3NL
ARHGAP9
PHLDA2
EPOP
ADAR
OSBP
POC5
PSMB2
TTC14
ZNF391
THOC5
SMIM20
ZNF286A
TRMU
MTMR12
SLC29A2
ASB6
TMEM170A
PDE2A
SDHAF3
FGFRL1
ANKFY1
APRT
NTAQ1
KAT2B
AURKAIP1
TBL1X
MAPK3
TNPO3
MTREX
DHX29
TBC1D23
TRMT10A
MTTP
TMEM80
NAA30
DEAF1
NAE1
ADNP
RPL27
EHBP1L1
SEC62
KPTN
FBXO30
RNF139
MOXD1
GPR37
RNF213
TTC21B
PLBD2
POLI
CNKSR3
MBTPS2
DHX8
PEMT
BIRC5
MFAP3
FAM114A2
QTRT1
OSCP1
IL17RC
RPS10-NUDT3
RPS10
TDP2
ACOT13
TXNDC9
EIF5B
CRH