ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3010140 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◣ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L2
MTRNR2L8
LGR6
RGPD2
RGPD1
SNX16
UBE2L3
ZNF335
GBA
GTF2H4
KXD1
AHCY
VPS37D
UBFD1
EARS2
NLRX1
OSCAR
NDUFA3
ZDHHC12
SMARCD2
PIH1D1
NR6A1
RFX1
MRPL45
ALDH16A1
CCDC107
HEATR3
NUCKS1
PRMT1
CACTIN
ARHGEF1
FXN
SGSM1
UBE2V2
PAXBP1
CYRIB
MLLT1
SOGA1
COASY
CLPB
TOR1A
C19orf25
ATG16L1
DRG2
SLC29A3
SPATA2
CDK12
TRMT1
ZDHHC24
ACTN3
METTL14
RNF24
ZNF638
SORBS1
TBC1D4
EIF3C
TKT
ADRM1
TERF2
PSMB6
UBE4A
HLA-E
SRRD
HPS4
WDR74
WDR43
EIF3CL
SETD1A
AARS2
RNF216
ARNT
GADD45B
PSMD9
HPD
UIMC1
SIRT5
ZFP36L1
TFB1M
EPS15
PAK4
CEP164
KIF16B
SLC39A10
PTPRF
SPHK2
RPL18
ZBTB3
ZCCHC14
SRXN1
ISOC2
TJP3
SWSAP1
AP3B1
FBXW5
C8G
UEVLD
STOML2
AP2A2
DDX17
TIPARP
LTO1
CLK3
HPS1
MRPL39
SLC25A16
PDCL
SMU1
NDUFS7
PIGBOS1
PIGB
CDC25B
SLC30A6
BRAP
ACAD10
PDLIM7
RAC1
ZNF77
SPAG4
UBOX5
FASTKD5
PPP6R1
CABLES2
CPPED1
HNRNPA2B1
MEGF8
ZNF131
CHST12
CCNT1
TAF1C
SYNJ2
CBX3
MED23
PDE4A
HPS6
ZMAT2
GPCPD1
MKNK2
PIGO
ADGRL1
SRPK1
TENT2
GTF2H5
SH2B1
RABGGTA
CCDC22
SMG8
SRCIN1
SPATC1L
GLIS2
SMCO4
RIOX1
USP35
KCTD21
TIA1
F2
SIRT4
PAXX
OSGIN1
TCTN3
RPL6
KDSR
RPS14
CLTA
COPS4
UTP25
KIF2C
NEURL4
TESK1
STX16
RIN2
DYM
ILF2
SLC35B1
RAB2A
MRPL35
MVB12A
NPAS4
DYNC2I1
TRIM26
TIMM9
SP2
KIAA0586
ZNF184
FBXL19
UBXN4
RAB5C
MEGF9
SLC25A20
SLC25A25
NAIF1
LUC7L2
RBM4B
NUDT9
MELK
GSTA4
SPAG8
RPS29
EFR3A
KANSL3
CLUAP1
STX6
GALNT10
TCIRG1
SCAMP4
ADAT3
NAE1
ENGASE
ATP5MC1
CLPP
UNC93B1
MRPL54
APBA3
TDRD7
FOXK2
FMC1-LUC7L2
CHMP6
MRFAP1L1
PITPNA
TOMM7
GPR137
FKBPL
PPP1R13L
LDLRAP1
DAGLB
GADD45GIP1
TFAM
DLAT
SCML1
SNU13
GPR160
ARPC3
DTD1
ZFAND1
PREB
LSM14B
SLC35A4
APBB3
PTPRA
NUP85
PRRT3
ATG4C
RAB14
GSN
LARP1
PSMD4
RPS6
WASF2
ENSA
EPRS1
TP53RK
KDM3B
PPP5D1
CALM3
ICMT
MATR3
NELFCD
ZNF234
ALDH18A1
RABGEF1
ATP6V0E2
ADNP
ZNF687
BAD
TTC38
PHKB
EMC4
PDCL3
TCF3
ZNF555
ST6GALNAC6
PRPSAP1
RNF114
RPS12
MEX3C
CYLD
KANK2
SLC27A4
LSM5
POFUT1
PLAGL2
CTR9
HRCT1
TP53I11
RUSC2
RPL36
RBBP5
SREBF2
PLEKHG2
TUFM
GNG7
ITFG1
KTN1
UBE2Q1
NACC1
SLC38A10
PRELID2
GRSF1
GON4L
TK1
ATF6
MCC
CTNNBL1
ZFAND4
ZNF609
AKT2
SYT7
MDGA1
GPSM2
SEMA4B
ZCCHC4
HOOK1
SHFL
VPS37C
ARHGEF39
SYMPK
GRPEL2
FOXA3
SSBP1
NICN1
KIFC3
RGL2
ZER1
TMEM214
COMMD2
NEDD1
MFSD4B
EIF5A
TLN1
CREB3
XKR8
HMGN4
LOC730098
RPL37A
PCCB
TSC1
MRFAP1
GFI1B
MTHFSD
NCAM2
NUF2
PARP2
TMEM161A
PEX3
ADAT2
PTPN1
RAB4B
PTK2B
RPL27
RBM5
MAPK14
DPH5
PDSS2
RAB11B
NEMF
DEF8
GABARAP
ICAM1
PPP2R2A
LRRC37A3
AARSD1
ZSCAN25
PDLIM1
GNE
DNAJC19
VKORC1
TRIP4
SPOCD1
GCDH
NUDT3
ZNHIT6
CDK5RAP1
RIF1
TSACC
NCOA6
CCT3
H6PD
MTMR14
GEMIN6
MANBAL
AKIRIN2
HUS1
PNN
SNRPC
KIAA0895
ANLN
RCC1
DNM2
NCOA5
CRLS1
KCTD2
ATP5PD
YEATS2
ZNF606
RNF213
ABRAXAS2
CYB5B
ZBTB40
DHX16
FKTN
ACOT9
CORO1C
INO80C
C8orf37
CCNC
TBX6
WDR59
HM13
EED
DMAC2
HAX1
SLC25A44
SARS2
MRPS12
AURKAIP1
GTF3C3
DPP3
TIGD1
EIF4E2
SEPTIN7
E2F6
ZZEF1
CYB5D2
USP45
TPM2
CNOT11
SPC24
RTKN
SYT11
PPP6C
COX5A
USP42
TMEM41A
STRBP
FANCG
DMAP1
SUOX
GRK6
POLDIP3
EEF1AKMT1
RNF187
TADA1
MRPL38
RAB8A
MTRNR2L9
LOXL4
NPR2
ZBTB43
ACTL6A
RBM12B
MARS1
ADAM19
EPC2
KDM1A
HIBCH
STAT3
HEXB
PPIL3
NIF3L1
ADPRHL1
ABCB8
ZNF713
PGPEP1
FAIM
MELTF
TTYH3
TMEM242
H4C3
FAM161B
COQ6
EXD1
CHP1
IL11RA
NEK6
RASA4
LZTS3
UBE2F
ZNF764
TACO1
TMEM51
MRPL44
CDT1
GABARAPL1
CBX4
BRAT1
VCL
CIZ1
SH3GLB2
AMOTL1
FBXL18
C9orf131
TTI2
RPP25L
BCL9L
CLTB
TRIM32
ASTN2
MOSPD3
SMN2
SMN1
FLOT1
CERCAM
ZNF443
RAB5B
TOP1
STARD3NL
DPY19L4
TMC6
NCOA7
UTP3
GAMT
CAMK1
ARHGEF11
AMZ2
GGCX
BCAS1
S1PR4
ATP6V0E1
WIPI2
RPS7
TMCO3
DCUN1D2
PPP1R9B
HIBADH
PNPLA6
TIMM10
DSN1
SDAD1
CBX1
PANK3
PPEF1
GLIPR1L2
RASA4B
EIF2D
DOT1L
LAPTM5
ARHGAP9
ATP5MC3
NOM1
TBRG4
COX16
ERCC1
TPK1
SLX4IP
OPA3
FUT10
DHX15
SLC44A1
DDX18
POLG
ASXL1
NDUFAB1
TIMM17A
CTDSP1
SCFD1
LMTK3
VPS13B
RPL38
TPP2
ASMTL
CDK8
WWOX
TM9SF4
PPP1R9A
FAM168B
SNUPN
UROS
BCCIP
NUTM1
NOP10
MBD4
IFT122
CWF19L2
SNX15
ELP3
PKD2L2
MTBP
MRPL13
ZNF799
PSMD3
MRPS23
B4GAT1
SLC12A4
ECSIT
DOLPP1
HOMEZ
STK4
MYNN
OGFOD1
CYP2R1
ASF1B
RMND1
H4C8
ARMT1
TADA3
ARPC4-TTLL3
ARPC4
GORASP2
VARS1
NIPA1
ATR
ADAMTSL5
ABHD16A
RPL35A
POLR3E
IQCG
ZNF343
ZNF572
RCN1
FEM1A
SLC31A1
H2AC12
FKBP15
MED18
RAD52
EFNA4
CDK11B
SF3A3
MNT
FABP1
GABPB2
EAPP
PRUNE1
MTF2
MINDY1
VAT1
KATNIP
GTF3C1
MOK
PRMT5
TIMM22
DGAT2
CDA
SRC
RAPGEF1
MTOR
PKN3
IL1RAP
DCT
ABHD3
STXBP3
INTS5
MRI1
INTS10
SEC13
PHLDA2
MRPS17
RBM25
COQ7
PCBD2
ALG10B
USP36
EIF3E
PMM1
AP3S2
UQCC1
NOL10
NIPA2
MRPS14
SLC29A2
NSMCE1
SLC35E2B
KIF3B
TANK
RGP1
GBA2
TCP11L1
TBC1D19
FLCN
PGC
MAD2L1BP
SMG5
SEC14L1
SAMD8
RIN3
ARFGEF2
INTS4
TSPAN10
NPLOC4
EIF1AD
BANF1
FCHO1
FAM8A1
ASGR1
ARHGEF3
SEC14L4
C16orf95
DYNLRB1
ARAF
H1-2
EIF3D
WDR70
TMEM184A
INTS12
GSTCD
RPS10-NUDT3
RPS10
RPL22
GRK1
EHBP1L1
DSTYK
POLG2
FBXO31
C12orf57
CLCF1
ILDR1
PHF12
MOB3A
IZUMO4
TMEM259
RNF207
SMARCC2
TGFB1I1
PPP6R3
FAF1
TCEA2
POLR2J3
PABPN1
COMMD6
ALOXE3
ANKRD13C
LNPEP
TFPT
PRPF31
DCAF11
ALKBH3
RIPOR3
AP2S1
RPL37
DCAF7
CCDC59
UPP1
NME1-NME2
NME1
PLEKHM3
GHITM
SDR39U1
CIAO3
HSPA6
FAM193B
ZNF582
HINT2
ZNF408
ARHGAP1
SBDS
ZYX
REXO4
LIMS1
LSG1
ZNF579
TRPM6
ZSWIM4
ATE1
QRICH1
DCTN1
PRXL2C
MAP11
TBL3
STRN3
AP4S1
ZKSCAN2
PGK1
LMO7
CDK9
USP8
SLC35E2A
REXO5
ERI2
ZNF24
HNRNPLL
RBIS
NDUFB4
COX7A2
ACTA2
UQCR11
RPN2
MROH8
DNAAF3
NFE2L2
LSM12
ZC3H15
BCAR3
NDUFS5
LTA4H
CCDC42
ATG4D
SEC62
MDM4
MTR
LPP
SNX8
DDHD2
C4orf48
UBE2I
PPAN-P2RY11
PPAN
ZSCAN9
SLC66A3
CDK11A
RPS19
SNRPE
BANP
XPO5
POLH
NUMA1
LRTOMT
SYNGR2
TEAD1
H4C15
H4C14
RBM12
HEXIM1
CPNE1
ELK3
AJUBA
GTF2H2
TPRA1
TMPRSS9
CEP78
TBL1X
INAFM2
POLM
ERCC6L2
TRIM59
DAGLA
RABL3
PCK1
GTF2E1
TSEN54
TBPL1
RRBP1
CASKIN2
RBM45
MRPS15
DPF2
VTA1
NMBR
ID1
DPY19L1
MAST3
CDC5L
MTRNR2L10
IFT46
H2BC12
ASB6
SSBP2
DPP9
WDR36
POLR1H
ARHGEF16
STX18
PDK2
MRPL58
CRTC1
CELSR3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
POLR3H
EVA1B
NOL11
EPOP
TRIB3
PFDN4
DECR1
PYDC5
INKA2
IFI16
DDX20
TCERG1
BRWD3
TMEM19
MTIF2
CCDC130
TIMM23
SNX3
DAZAP1
CDIPT
PAFAH2
COPB2
ANXA2
CDAN1
EIF3F
DNAH2
PRRG2
NOSIP
MDFIC
MRPL12
EIF4G2
RARS1
ZNF256
ZBTB45
ROBO3
KPNB1
CDYL
NES
C8orf76
EMC8
COX4I1
ZDHHC5
GTF2H2C
FAM220A
RIN1
PPP1R15A
LAMP3
CAPG
KDM4B
CBY3
SLC39A6
ITFG2
DENR
ZNF3
METTL3
C17orf64
MFAP4
RPL10A
NLRP1
HMGB1
CCDC71
HEATR1
CLRN2
ATF7IP
MEMO1
SCN8A
EHD2
MRAS
GTF2IRD2B
TDP2
ACOT13
COX20
ABT1
YTHDF2
UCHL3
ST6GALNAC4
AIFM1
SRPK2
PTK6
NMRK1
EPB41L5
NRROS
MIGA2
CD2BP2
ADAR
KDM3A
ELL
YARS2
VCP
INTS8
TRAPPC3
SP1
PRDX1
MYO1C
CCDC117
PROCA1
TRAF6
RAG1
GNA13
ARL14EP
MAD1L1
DDX59
VPS35L
PKIG
ITGB3BP
EIF1
EFCAB7
PYCR1
NDUFB3
FAM126B
ARSD
SNRPB
NDUFC2-KCTD14
NDUFC2
TTC21B
EIF5A2
COQ3
RALGAPB
NBN
KLHL20
PPID
EPO
ABCD3
PRDM11
SLC13A3
ZMPSTE24
LEO1
IFTAP
GLTPD2
ELAVL1
RHOF
GPER1
TFF3
PUS7L
POLR2B
NOA1
MAP3K10
LPIN3