ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L2
SPAG8
MTRNR2L8
CDK12
STOML2
PIGO
TBC1D4
CCDC107
MED23
UBE2F
PSMB6
PEX3
ADAT2
VPS37D
PTPRF
ARHGEF1
ZBTB40
CLTA
RPS7
TRIP4
RGPD2
RGPD1
HRCT1
RNF216
INTS12
GSTCD
DMAP1
ATP5MC3
TESK1
MRFAP1L1
UTP25
KDM1A
RPL27
H4C3
ZDHHC5
COMMD2
AKIRIN2
UBE2L3
POLR1H
PAXX
AURKAIP1
RUSC2
GTF3C3
TOMM7
AHCY
RMND1
ARMT1
NFE2L2
NLRX1
TLN1
CREB3
SIRT5
AP2A2
LRRC37A3
ARL14EP
SSBP1
TOP3B
CLPB
GNE
DNAJC19
ZCCHC4
PDCL
PHKB
ITFG1
PSMF1
TSSC4
CYRIB
IL11RA
ELP3
UBE2V2
GTF2H4
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
FAF1
TRAPPC9
SNRPB2
ARHGEF39
ZFAND1
COX7A2
CIZ1
OSCAR
NDUFA3
NCOA5
ATR
NDUFS7
TENT2
EIF3E
ZNF335
EPRS1
RBBP5
MRFAP1
C9orf131
MRPS14
MRPL45
RNF24
DPY19L4
ZSCAN9
UBFD1
EARS2
NR6A1
TBC1D19
KIF3B
WDR43
SPHK2
RPL18
WDR74
DYM
CABLES2
GBA
GPCPD1
SMG5
NPR2
RGP1
GBA2
GTF2H2
GTF2H2C
ENGASE
MRPL58
ERCC6L2
SLC35B1
PANK3
PRDX1
CTNNBL1
PPP5D1
CALM3
MTERF1
AP1G1
ZER1
CRLS1
PRMT1
AARS2
STX16
TACO1
DSTYK
INKA2
DDX20
FBXW5
C8G
RPS14
FANCG
SF3A3
FAM8A1
PLEKHM3
ZMAT2
HIBCH
PAXBP1
MELK
RAC1
REXO4
PGS1
MTF2
VCP
EIF4A2
HEATR3
DPH5
AMZ2
CASC3
PRPSAP1
RAD52
EIF1AD
BANF1
TMEM242
COMMD6
AP3S2
NFX1
CDK5RAP1
LOC730098
UNC13B
EDC4
TPM2
CDC25B
RPL38
DNM2
DRG2
DDX18
RIN2
NOTCH2
SNAP47
JMJD4
ZMPSTE24
UIMC1
CCNC
ADNP
EIF3D
HINT2
RRP15
FBXW2
MRPL35
MRPL39
NDUFC2-KCTD14
NDUFC2
TFB1M
EIF3F
MEX3C
MRPL38
POLG2
RECK
CCDC88A
PIH1D1
PPIL3
NIF3L1
ZDHHC24
ACTN3
ZNF638
MVB12A
FOXK2
ZKSCAN2
NDUFAF4
KLHL32
ZNF165
MITD1
ZBTB3
ASXL1
MRPL12
TMEM222
SMARCD2
EED
YTHDF2
HIF1AN
SMU1
STAT3
MRPL44
RPL37
ZSCAN16
PLEKHG2
ATF2
NOL11
MRPL3
NOTCH2NLC
SP2
PDCL3
FKTN
KCTD2
ATP5PD
PAFAH2
PDCD6
RFC5
ZNHIT6
WDR70
NMNAT1
LZIC
GORASP2
TIMM9
KIAA0586
PCCA
ZNF8
NUTM1
NOP10
MRPL15
FXN
UBE4A
NUDT9
MDM4
RNFT1
POLR2M
P3H4
FKBP10
H4C11
SH2B1
LUC7L2
PRELID2
SMCO4
DOT1L
UCHL3
SNRPE
TXNDC11
TANK
CARD14
ZNF461
MSL2
C8orf37
LMAN2
COPS7A
DCP1A
RPL10A
VPS25
RBIS
LRRC59
FAM227B
DTWD1
KXD1
ZDHHC12
RFX1
ALDH16A1
NUCKS1
CACTIN
C19orf25
SGSM1
SRRD
HPS4
SPATA2
COASY
MLLT1
SOGA1
ATG16L1
METTL14
TRMT1
HLA-E
TKT
SLC29A3
ADRM1
PAK4
TOR1A
ISOC2
TERF2
SETD1A
ARNT
EPS15
SLC30A6
SNX16
EIF3C
RABGGTA
PSMD9
PDLIM7
HPD
CPPED1
MEGF8
SPAG4
SRXN1
CLK3
EIF3CL
KIF16B
CEP164
NEURL4
F2
BRAP
AP3B1
ACAD10
PDE4A
GADD45B
LTO1
TIA1
HPS1
SYNJ2
SMG8
SORBS1
UBOX5
FASTKD5
SWSAP1
PIGBOS1
PIGB
SLC25A16
FBXL19
CCNT1
DYNC2I1
FMC1-LUC7L2
LGR6
CCDC22
ZCCHC14
KIF2C
ZNF131
ZNF184
NPAS4
TRIM26
USP35
KCTD21
GLIS2
TJP3
CLPP
ATG4C
PPP1R13L
MKNK2
TAF1C
CHST12
SRPK1
DLAT
ZNF687
SCAMP4
ADAT3
NAE1
FKBPL
ZNF77
RPL6
DAGLB
MRPL54
APBA3
SCML1
UNC93B1
GTF2H5
MATR3
SREBF2
HPS6
UBXN4
MEGF9
TCF3
ZFP36L1
PTPRA
PITPNA
CLUAP1
AKT2
SPATC1L
RPS6
PREB
SRCIN1
WASF2
LDLRAP1
NUP85
KDSR
CHMP6
COPS4
SYMPK
FOXA3
KIFC3
RPL36
CYLD
SLC25A25
NAIF1
TUFM
XKR8
TCIRG1
ATP6V0E2
GALNT10
KDM3B
NELFCD
GRSF1
PDSS2
ILF2
RAB5C
UBE2Q1
EMC4
ST6GALNAC6
SNU13
PSMD4
LSM14B
RAB2A
SHFL
SEMA4B
TP53RK
VPS37C
GCDH
NUF2
EIF5A
ATP5MC1
TCTN3
ZNF234
LARP1
GADD45GIP1
NACC1
CTR9
MCC
ZNF606
TSC1
GFI1B
SLC38A10
PTK2B
ICAM1
RPL37A
GSTA4
POFUT1
PLAGL2
RPS12
NICN1
TMEM161A
TBX6
HAX1
RBM5
RAB4B
MFSD4B
HUS1
TIGD1
EIF4E2
EFR3A
RIF1
RIOX1
ZZEF1
CYB5D2
UEVLD
PTPN1
CNOT11
ZSCAN25
SLC35A4
APBB3
TTC38
RBM4B
CYB5B
GRPEL2
RNF213
TK1
GPR160
GON4L
MTRNR2L9
LOXL4
PCCB
RPS29
RNF114
ENSA
ATF6
USP45
ICMT
MANBAL
KANSL3
WDR59
DPP3
GPSM2
RAB14
GSN
RASA4
TIPARP
SIRT4
TMEM214
PPP2R2A
GABARAPL1
NEDD1
RAB11B
SNRPC
MAPK14
TFAM
LSM5
PPP6R1
KANK2
RNF187
RABGEF1
HMGN4
H6PD
ADPRHL1
TDRD7
USP42
UTP3
GAMT
MTMR14
EEF1AKMT1
CAMK1
RCC1
ABRAXAS2
GGCX
BCAS1
ZFAND4
S1PR4
SLC27A4
TIMM10
GNG7
SYT11
KTN1
RASA4B
ADAM19
ZNF555
OPA3
DHX15
SLC44A1
HM13
SLC25A20
SARS2
MRPS12
DMAC2
PDLIM1
SCFD1
VPS13B
GEMIN6
TPP2
ASMTL
CDK8
TM9SF4
PPP1R9A
FAM168B
ZNF443
RTKN
MBD4
IFT122
CWF19L2
NCOA6
PKD2L2
MTBP
MRPL13
PSMD3
MRPS23
DEF8
OGFOD1
ASF1B
AARSD1
NEK6
RAB5B
ZNF764
TADA1
SLC31A1
HEXB
FKBP15
EFNA4
FABP1
TBRG4
KATNIP
GTF3C1
SLC25A44
CTDSP1
DGAT2
MOSPD3
PPP6C
CDA
MTOR
TMC6
DCT
MRI1
DSN1
PNPLA6
COX16
TRIM32
ASTN2
ALG10B
USP36
PNN
SPC24
UQCC1
TPK1
SLC35E2B
RAB8A
MAD2L1BP
ZNF799
SYT7
SEC14L1
RIN3
TSACC
CCT3
BRAT1
ASGR1
ARPC3
ZNF572
SEC14L4
TMEM184A
RPL22
GRK1
WIPI2
GLIPR1L2
ECSIT
ARHGEF11
SLC12A4
BCL9L
VKORC1
NCOA7
ZBTB43
SPOCD1
TGFB1I1
TCEA2
ALOXE3
ANKRD13C
TADA3
ARPC4-TTLL3
ARPC4
TFPT
PRPF31
MED18
DCAF11
AP2S1
LAPTM5
DCAF7
UPP1
NME1-NME2
NME1
GHITM
PRMT5
KIAA0895
ANLN
SDR39U1
CIAO3
NEMF
MARS1
DTD1
RBM12B
PRUNE1
MINDY1
CBX4
SNUPN
SDAD1
QRICH1
DCTN1
POLR3E
PGK1
LMO7
CDK9
REXO5
ERI2
ZNF24
HNRNPLL
NDUFB4
UQCR11
SRC
PGPEP1
ZC3H15
SUOX
NDUFS5
ATG4D
SH3GLB2
HIBADH
PGC
GABPB2
PPAN-P2RY11
PPAN
STARD3NL
LMTK3
COQ7
YEATS2
SYNGR2
SEC13
DHX16
ABCB8
CDK11B
RBM12
NDUFAB1
CPNE1
AJUBA
AMOTL1
INAFM2
ZNF713
STXBP3
RGL2
DOLPP1
PCK1
RPL35A
IQCG
TSEN54
TMEM41A
TBPL1
CASKIN2
RBM45
MRPS15
DYNLRB1
VTA1
NMBR
COX5A
CDC5L
MTRNR2L10
ERCC1
WDR36
EIF2D
CRTC1
PCBD2
HOMEZ
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PPP1R9B
EVA1B
VCL
SMN2
SMN1
TRIB3
PYDC5
IFI16
TMEM51
ARFGEF2
MTIF2
TIMM23
DAZAP1
CDIPT
ALKBH3
USP8
ANXA2
CDAN1
PRRG2
NOSIP
SMARCC2
CORO1C
ZBTB45
KPNB1
EHBP1L1
NES
EMC8
COX4I1
ADAMTSL5
EXD1
CHP1
CAPG
RNF207
KDM4B
CBY3
LPP
PRRT3
ITFG2
PMM1
DENR
METTL3
C17orf64
ZNF408
ARHGAP1
RCN1
NLRP1
CCDC71
HEATR1
CLRN2
ATF7IP
LSG1
MEMO1
GRK6
TBL3
LZTS3
SBDS
PRXL2C
TDP2
POLG
ACOT13
ST6GALNAC4
UROS
NMRK1
EPB41L5
BCCIP
ADAR
KDM3A
ARAF
TRAPPC3
SP1
FLCN
CCDC117
GNA13
MAD1L1
VPS35L
CCDC42
ITGB3BP
EFCAB7
MTR
ARHGEF3
ARHGAP9
NDUFB3
FAM126B
SNRPB
TTC21B
NSMCE1
KLHL20
TCP11L1
EPO
SLC13A3
RIPOR3
LEO1
IFTAP
INO80C
GLTPD2
MDGA1
TFF3
MAP3K10
BEGAIN
ZNF582
TMEM18
SCCPDH
NIPA2
AP2A1
VARS1
VAT1
PPEF1
TRPM6
ZNF579
OSBP
ELOVL6
NRL
H4C8
TIMM17A
IL3RA
XPO5
PSMB2
POLH
NKD1
ACOT9
RPL24
RBL1
DNMT1
CCDC130
EAPP
COPB2
CEP78
ASB6
CIC
CYB5R4
ZNF343
TPRKB
PKD1L2
NCBP3
PUS10
PEX13
EVI5L
TGDS
GGA1
CBX1
C1QBP
CDK11A
DECR1
SURF6
SHISA5
RPS19
PRCD
FBXL18
FLOT1
EPOP
PPP1R7
PASK
MECR
ID1
C1QTNF6
IPO4
ATE1
ZNF554
OGA
PGAP3
PFDN4
ERBB2
CLTB
SNX15
DUSP7
IL1RAP
SH2D5
NEK2
ZNF181
FAM200B
ATXN7L2
ATP6V0E1
IDH1
CLASP1
SLC66A3
LIMS1
CFDP1
BLVRB
ACTL6A
PALM
NOL10
USP48
FAM220A
BCAR3
BCAS3
FCHO1
PNKD
NOB1
CFB
ZCCHC3
SEC62
MAST3
DDX23
LAMP3
COQ8B
CCDC59
GFPT2
GHDC
BMF
PKN3
MST1
ARHGEF16
SSBP2
JAML
DPY19L1
CD276
SUPT7L
SLC4A1AP
TCERG1
ADA
PKIG
DIPK1B
DDX1
STX18
MORC3
FUT10
SNX8
NCLN
H4C6
APOH
ACTR3
OMA1
DAB1
CELSR3
STK4
PTPN4
CAPN2
DYRK1A
RFXANK
BORCS8
LPIN3
HOOK1
GALT
LSM12
MRPL48
NIPA1
KDELR2
SAR1A
HMGB1
FBXW9
COQ3
TIMM22
GTPBP2
MARCHF7
BHMT2
MYO1C
SCAND1
RPS24
GPR17
PHF10
YIF1B
TPRA1
RFX7
RARS1
PHLDA2
PIP5KL1
EIF5A2
CD2BP2
SRPK2
RACK1
FEM1A
ZNF219
XKR7
DDT
BRIX1