ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741419 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◣ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L8
GTF2H4
VPS37D
PSMB6
ZNF335
CCDC107
PTPRF
ZMAT2
CYRIB
TBC1D4
MRPL45
NEURL4
NUDT9
MTRNR2L2
HEATR3
ENGASE
HLA-E
RNF216
SMU1
CTNNBL1
PRMT1
ADRM1
NLRX1
PIH1D1
ALDH16A1
UBFD1
EARS2
ZDHHC12
AHCY
RGPD2
RGPD1
RNF24
NCOA5
MRFAP1L1
KXD1
OSCAR
NDUFA3
SP2
MED23
TESK1
SLC31A1
FKBP15
MELK
UBE2V2
WDR43
WDR59
SLC29A3
TOR1A
PAXX
KCTD2
ATP5PD
CLTA
TOMM7
NR6A1
XKR8
C19orf25
CNOT11
CIAO3
STOML2
PIGO
SMCO4
MCC
CHMP6
CDK12
FBXW5
C8G
TCTN3
CLPB
TLN1
CREB3
DPH5
GRSF1
PREB
SCFD1
DYM
PHKB
ITFG1
MRFAP1
MATR3
LTO1
RPS14
ZCCHC14
RIN2
FXN
UBOX5
FASTKD5
CWF19L2
CABLES2
TMEM51
AARS2
SRRD
HPS4
SGSM1
UTP25
ELP3
PAXBP1
KDM3B
ICMT
UBE2L3
TRMT1
TIA1
EPRS1
DRG2
CACTIN
NUP85
ARNT
ZNF131
AP2S1
EED
DLAT
ZDHHC24
ACTN3
ZCCHC4
PRPSAP1
NPR2
TACO1
EMC8
COX4I1
SMARCD2
PTPN1
ANKRD46
CDYL
SYMPK
FOXA3
HRCT1
RAB5B
MLLT1
TKT
RFX1
CLPP
TDRD7
SOGA1
EPS15
SLC25A20
SPAG8
DMAP1
TENT2
MAPK14
MTBP
MRPL13
OSGIN1
DNAJC19
UNC93B1
GHITM
UIMC1
TAF1C
ASMTL
RPL6
ARHGEF39
MTOR
SLC25A16
CRLS1
GGCX
ST6GALNAC4
ZNHIT6
UTP3
SYNJ2
PSMD4
SLC38A10
PDE4A
ARHGEF1
GABARAPL1
FANCG
RCN1
SIRT5
UBXN4
SLC35A4
APBB3
CLK3
AKIRIN2
RBM4B
ZFAND1
RIF1
CIZ1
PARG
GPCPD1
VPS13B
COASY
TRABD
LOC730098
PKD1L2
CDC25B
STX16
SSBP1
SLC25A25
NAIF1
KCTD18
DMAC2
C6orf226
TTC38
RAC1
LSM5
COX16
METTL14
WDR74
PEX3
ADAT2
GON4L
SYT11
LMTK3
CLCF1
TIPIN
NUCKS1
MKNK2
RUSC2
SF3A3
RPL36
FKTN
RAB14
GSN
SARS2
MRPS12
PPP6C
FLOT1
IL1RAP
CLUAP1
PPIL3
NIF3L1
DPY19L4
ENSA
DPP3
PKD2L2
ZNF638
SRXN1
TCF3
TRIP4
ELK3
HUS1
CDK8
CDAN1
FAM200B
RAD52
CEP164
FOXK2
GORASP2
SMG8
SEC13
CFDP1
ST6GALNAC6
NDUFS7
PDCL3
EEF1AKMT1
RBM45
ADAMTSL5
PDSS2
MDFIC
PAK4
LAPTM5
GNE
RBM12
CPNE1
CDK5RAP1
SNU13
WDR70
EIF3C
GSTA4
NEDD1
TBRG4
SPATA2
ATG16L1
ZNF184
SCAMP4
ADAT3
ADNP
GLIPR1L2
MMS22L
SLC30A6
ZNF764
PMM1
ARFGEF2
DAGLB
LARP1
ELOVL6
ATG4C
PCCB
TSACC
CCT3
USP45
GADD45B
MRPL38
COX5A
TGDS
UBE4A
AP3B1
AARSD1
TRAPPC3
TRIM45
RPS6
FAF1
EIF2D
CHST15
POU2F2
COL18A1
DAB2
SIRT4
ZC3H15
MVB12A
MEGF9
CCNC
GPSM2
POLG2
NELFCD
RPL37A
COX7A2
ZSCAN9
RPL10A
GRAMD2B
PPP1R13L
RAB5C
SHFL
TMEM214
PLEKHG4
HAX1
SLC44A1
CHERP
FAM8A1
IL31RA
NEMF
GTF2H5
TPK1
INO80C
TRAPPC9
FPR1
HNRNPD
SYNGR2
TIMM23
VKORC1
SPHK2
RPL18
PITPNA
NICN1
TPM2
RPP25L
KLHL20
WDR7
SELENOH
MADCAM1
MEST
CDA
MARS1
NLRP1
ARHGAP9
ATF6
ACOT9
KIF16B
EMC4
RAB2A
RAN
FGFRL1
EIF3CL
CCNT1
HPS6
ADPRHL1
GEMIN6
ERCC1
BRAP
ACAD10
NBN
HPS1
HIBADH
TIMM22
C9orf131
KRBA2
WIPI2
MAD1L1
DIPK1B
DYNC2I1
PLEKHG2
PTK2B
MTF2
NIPA2
LPAR2
RIC8A
BET1L
ZZEF1
CYB5D2
COMMD6
FAIM
ZNF789
SETD1A
NDUFS5
CDC5L
RIPOR3
NKIRAS2
DNAJC7
CASC3
RBBP5
HMGN4
DCAF7
RBM12B
ZNRF1
MANBAL
IL11RA
CCDC42
MAP3K10
MRPS33
ECSIT
DHX16
FAM156B
FAM156A
SLC35B1
ISOC2
ZER1
SRI
ZBTB3
ZNF234
RPAP1
BRIX1
OMA1
DAB1
LIMS1
ZNF93
ICAM1
NDUFAB1
HINT2
CPT1A
ATXN7L2
DOLPP1
GNA13
KCTD3
LMO7
H4C6
RPL38
UBE2Q1
COPS4
AP3M2
RABGEF1
DEF8
SLC27A4
ARHGAP24
GBA
TFB1M
TERF2
SNX16
RABGGTA
PSMD9
PDLIM7
HPD
CPPED1
MEGF8
SPAG4
SH2B1
F2
LUC7L2
SORBS1
PDCL
SWSAP1
PIGBOS1
PIGB
FBXL19
FMC1-LUC7L2
LGR6
CCDC22
KIF2C
NPAS4
AP2A2
TRIM26
USP35
KCTD21
GLIS2
TJP3
CHST12
SRPK1
MRPL35
ZNF687
NAE1
FKBPL
ZNF77
MRPL39
MRPL54
APBA3
SCML1
SREBF2
ZFP36L1
PTPRA
TIMM9
KIAA0586
AKT2
SPATC1L
SRCIN1
WASF2
LDLRAP1
KDSR
KIFC3
CYLD
TUFM
PRELID2
TCIRG1
ATP6V0E2
GALNT10
RPL27
PPP5D1
CALM3
ILF2
LSM14B
SEMA4B
TP53RK
VPS37C
GCDH
NUF2
EIF5A
ATP5MC1
GADD45GIP1
DNM2
NACC1
CTR9
ZNF606
TSC1
GFI1B
ZBTB40
POFUT1
PLAGL2
RPS12
TMEM161A
TBX6
RBM5
RAB4B
MFSD4B
TIGD1
EIF4E2
EFR3A
RIOX1
UEVLD
ZSCAN25
MEX3C
CYB5B
GRPEL2
RNF213
TK1
GPR160
MTRNR2L9
LOXL4
RPS29
RNF114
COMMD2
KDM1A
HIBCH
STAT3
KANSL3
GTF3C3
TMEM242
RASA4
TIPARP
UBE2F
PPP2R2A
MRPL44
RAB11B
SNRPC
TFAM
PPP6R1
KANK2
RNF187
H6PD
USP42
GAMT
MTMR14
CAMK1
RCC1
ABRAXAS2
BCAS1
ZFAND4
S1PR4
RPS7
TIMM10
GNG7
KTN1
RASA4B
DOT1L
ADAM19
ZNF555
ATP5MC3
OPA3
DHX15
HM13
DDX18
PDLIM1
C8orf37
TPP2
TM9SF4
PPP1R9A
FAM168B
ZNF443
RTKN
MBD4
IFT122
AURKAIP1
NCOA6
PSMD3
MRPS23
OGFOD1
ASF1B
RMND1
ARMT1
NEK6
ATR
TADA1
HEXB
EFNA4
FABP1
KATNIP
GTF3C1
SLC25A44
CTDSP1
DGAT2
MOSPD3
TMC6
DCT
MRI1
DSN1
PNPLA6
TRIM32
ASTN2
ALG10B
USP36
EIF3E
PNN
SPC24
UQCC1
MRPS14
SLC35E2B
RAB8A
TANK
RGP1
GBA2
TBC1D19
MAD2L1BP
ZNF799
SYT7
SMG5
SEC14L1
RIN3
EIF1AD
BANF1
BRAT1
ASGR1
ARPC3
ZNF572
SEC14L4
ASXL1
EIF3D
TMEM184A
INTS12
GSTCD
RPL22
GRK1
DSTYK
ARHGEF11
SLC12A4
BCL9L
NCOA7
ZBTB43
SPOCD1
TGFB1I1
TCEA2
ALOXE3
ANKRD13C
TADA3
ARPC4-TTLL3
ARPC4
TFPT
PRPF31
MED18
DCAF11
RPL37
UPP1
NME1-NME2
NME1
PLEKHM3
PRMT5
KIAA0895
ANLN
SDR39U1
DTD1
LRRC37A3
PRUNE1
MINDY1
CBX4
SNUPN
SDAD1
QRICH1
DCTN1
PANK3
POLR3E
PGK1
CDK9
REXO5
ERI2
ZNF24
HNRNPLL
NDUFB4
UQCR11
SRC
PGPEP1
NFE2L2
SUOX
ATG4D
SH3GLB2
PGC
GABPB2
PPAN-P2RY11
PPAN
STARD3NL
COQ7
YEATS2
ABCB8
CDK11B
AJUBA
H4C3
AMOTL1
INAFM2
ZNF713
STXBP3
ERCC6L2
RGL2
PCK1
RPL35A
IQCG
TSEN54
TMEM41A
TBPL1
CASKIN2
MRPS15
DYNLRB1
VTA1
NMBR
MTRNR2L10
WDR36
POLR1H
MRPL58
CRTC1
PCBD2
HOMEZ
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PPP1R9B
EVA1B
VCL
NOL11
SMN2
SMN1
TRIB3
PYDC5
INKA2
IFI16
DDX20
MTIF2
DAZAP1
CDIPT
ALKBH3
PAFAH2
USP8
ANXA2
PRRG2
NOSIP
AP3S2
SMARCC2
MRPL12
CORO1C
ZBTB45
KPNB1
EHBP1L1
NES
REXO4
ZDHHC5
EXD1
CHP1
CAPG
RNF207
KDM4B
CBY3
LPP
PRRT3
ITFG2
DENR
METTL3
C17orf64
ZNF408
ARHGAP1
CCDC71
HEATR1
CLRN2
ATF7IP
LSG1
MEMO1
GRK6
TBL3
LZTS3
SBDS
PRXL2C
TDP2
POLG
ACOT13
YTHDF2
UCHL3
UROS
NMRK1
EPB41L5
BCCIP
ADAR
KDM3A
ARAF
VCP
SP1
PRDX1
FLCN
CCDC117
VPS35L
NUTM1
NOP10
ITGB3BP
EFCAB7
MTR
ARHGEF3
NDUFB3
FAM126B
SNRPB
AMZ2
TTC21B
NSMCE1
SNRPE
TCP11L1
EPO
SLC13A3
ZMPSTE24
LEO1
IFTAP
GLTPD2
MDGA1
TFF3
BEGAIN
ZNF582
TMEM18
SCCPDH
KIF3B
AP2A1
ZKSCAN2
VARS1
VAT1
PPEF1
TRPM6
ZNF579
RBIS
OSBP
NRL
H4C8
TIMM17A
IL3RA
XPO5
PSMB2
POLH
NKD1
MDM4
RPL24
RBL1
DNMT1
CCDC130
EAPP
COPB2
CEP78
ASB6
CIC
CYB5R4
ZNF343
TPRKB
NCBP3
PUS10
PEX13
EVI5L
GGA1
CBX1
C1QBP
CDK11A
DECR1
SURF6
SHISA5
RPS19
PRCD
FBXL18
EPOP
PPP1R7
PASK
MECR
ID1
C1QTNF6
IPO4
ATE1
ZNF554
OGA
PGAP3
PFDN4
ERBB2
CLTB
MTERF1
SNX15
GTF2H2
DUSP7
CARD14
SH2D5
NEK2
ZNF181
ATP6V0E1
ZNF461
IDH1
CLASP1
SLC66A3
BLVRB
EIF4A2
EIF3F
ACTL6A
PALM
NOL10
USP48
FAM220A
BCAR3
BCAS3
FCHO1
PNKD
NOB1
CFB
ZCCHC3
SEC62
MAST3
DDX23
LAMP3
COQ8B
CCDC59
GFPT2
GHDC
BMF
PKN3
MST1
ARHGEF16
SSBP2
JAML
DPY19L1
CD276
SUPT7L
SLC4A1AP
ARL14EP
ZNF165
TCERG1
ADA
PKIG
DDX1
STX18
MORC3
FUT10
SNX8
NCLN
APOH
ACTR3
CELSR3
STK4
PTPN4
CAPN2
DYRK1A
RFXANK
BORCS8
LPIN3
HOOK1
GALT
LSM12
RECK
MRPL48
NIPA1
KDELR2
SAR1A
MRPL3
HMGB1
FBXW9
COQ3
GTPBP2
MARCHF7
GTF2H2C
BHMT2
MYO1C
SCAND1
RPS24
GPR17
PHF10
YIF1B
TPRA1
RFX7
RARS1
PHLDA2
PIP5KL1
EIF5A2
CD2BP2
SRPK2
RACK1
FEM1A
ZNF219
XKR7
DDT