ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741424 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◣ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

STOML2
CDK12
TBC1D4
CCDC107
MTRNR2L8
ZNF335
GTF2H4
MTRNR2L2
UBE2V2
SP2
PIGO
VPS37D
PSMB6
TESK1
ARHGEF1
SPAG8
CLPB
PAXBP1
AHCY
UBE2L3
TFPT
PRPF31
UBFD1
EARS2
CCNC
LOC730098
RMND1
ARMT1
PRPSAP1
EIF3E
KANSL3
MTBP
MRPL13
ZBTB40
RPL27
CLTA
NEURL4
NLRX1
NUDT9
NPR2
TLN1
CREB3
WDR43
RUSC2
MRPL45
HEATR3
PTPRF
INKA2
DDX20
GNE
MELK
DLAT
SMG5
TMEM41A
MRFAP1
CYRIB
C9orf131
PEX3
ADAT2
MRPS14
ZCCHC4
MED23
MRPL44
TGFB1I1
HUS1
KDM1A
UBE2F
STX16
MRFAP1L1
TRIP4
NUF2
ATP5MC3
HRCT1
ARHGEF39
SYT7
GBA
SMARCD2
RIN2
GTF3C3
PAXX
DYM
SH2B1
RBBP5
TPM2
MRPL21
IGHMBP2
ZDHHC24
ACTN3
ENGASE
LTO1
ATAD2
SOGA1
RNF24
TMEM242
TENT2
SPHK2
RPL18
XKR8
UNC93B1
FKBPL
ZSCAN9
ZBTB45
ZMAT2
COMMD6
UCHL3
VPS13B
MTIF2
FBXW5
C8G
INTS2
MCC
TACO1
STX18
TOR1A
RNF114
TJP3
DNAJC19
ADNP
ADPRHL1
ATR
HLA-E
RGP1
GBA2
DCAF7
PRKAB2
CHD1L
VMAC
NDUFA11
FANCG
DRG2
WDR74
ZBTB3
UTP25
LSM14B
DPY19L4
EPS15
UBE4A
AARS2
CDC25B
PPIP5K2
GIN1
C19orf25
RPP25L
COPS7A
PIH1D1
ALDH16A1
ZNHIT6
POLR1H
RNF216
SRXN1
RFX1
PLEKHM3
ZDHHC12
IFTAP
RBL1
PRMT1
STAT3
RPS7
SLC35E2B
TMEM18
SMG8
LARP1
SPAG4
EFR3A
AARSD1
TIMM9
KIAA0586
PDSS2
GORASP2
KDM3A
NDUFS7
GPCPD1
NUP85
SYNGR2
RBM28
TOMM7
KDM3B
RAC1
NR6A1
COPS4
PPP6C
CGGBP1
C3orf38
MTF2
ZNF408
ARHGAP1
PPP1R13L
MTOR
SLC25A25
NAIF1
SLC38A10
SIRT6
ANKRD24
HINT2
CSNK1G3
EPRS1
IL11RA
DDX1
PREB
RBM45
LMO7
HPS1
MRPL39
KIF3B
ERCC6L2
ZMPSTE24
SNAP47
JMJD4
ISOC2
SF3A3
OSCAR
NDUFA3
FXN
RPS20
TTC21B
WWP1
HIBCH
BCAS3
UBOX5
FASTKD5
ZDHHC5
ICMT
SSBP1
AKIRIN2
CDK8
PKD2L2
TIMM10
GABPB2
ZNF165
SCAMP4
ADAT3
WDR70
BANP
MRPL12
HIF1AN
PDLIM7
TCF3
DPY19L1
TDP2
ACOT13
TSEN54
CASKIN2
ITGB3BP
EFCAB7
EFHD1
MEX3C
IPO4
UBB
PIH1D2
NKAPD1
NME1-NME2
NME1
SSBP2
ITFG2
ZSCAN30
WDR59
INTS12
GSTCD
NCBP3
AP1G1
FAM135A
DSTYK
PRCD
COQ3
GRSF1
FKTN
ARHGAP24
PSMD4
DCTN3
TBC1D19
ETFDH
C4orf46
GAA
SUGCT
MPLKIP
RPS15A
DNM2
ZNF572
TCERG1
GTF2H2C
GTF2H2C_2
TATDN3
NSL1
MRPS33
NUDCD3
MRPS15
C17orf64
MATR3
TUBGCP3
SNRPD3
GUCD1
PPP5D1
CALM3
TBPL1
SRRD
HPS4
MRPL38
SEC13
TRMT2A
RANBP1
SMIM8
MRPL16
RRP15
SMU1
CABLES2
RAB11B
PSMF1
VPS25
CALM2
SIRT5
SLC30A6
FUT10
CCDC88A
E2F6
DENR
BRIX1
NOP16
HIGD2A
MDC1
ZCCHC14
SNU13
TAF1C
NCOA5
H4C3
EIF5A2
RWDD1
HIKESHI
CDK5RAP1
UNC13B
RGPD2
RGPD1
TERF2
DHX15
PSMD3
ALG10B
MTR
PGM1
CTNNBL1
GTF3C5
PPP4R3B
CCNI
SEMA4B
ELP3
MRPL58
CCZ1B
SEPTIN7
RPL37
METTL18
C1orf112
SLC35A4
APBB3
CCDC71
AAR2
ALKBH3
SERPINB6
RECK
UBE3B
ANGEL1
APPBP2
PHKB
ITFG1
MAPK14
TFB1M
DDX18
NDUFAB1
AP2S1
ZNF391
EIF1B
CLUAP1
ZC3H15
OSBP
PGBD2
RFX7
KLLN
TNPO3
PTEN
ATG16L1
CLPP
ZNF577
TMEM209
MTFR1
FUCA2
IFNAR1
SPATA2
DPH5
POLG
SUPT7L
SLC4A1AP
MRPL3
CIPC
CNOT11
MELTF
VTA1
NMBR
FRA10AC1
WBP2
MTMR14
SEC62
TTC26
LRP6
MLLT1
ZNF184
DAGLB
RPS6
SLC31A1
FKBP15
MRI1
CARD14
GALT
ZDHHC6
VTI1A
THEM4
SLC35A3
CEP164
PRELID2
EIF1AD
BANF1
TRAF6
RAG1
MOB4
ZNF131
PLEKHG2
INO80C
REXO4
PLS1
ZSWIM3
ACOT8
NUDT15
EIF3C
EIF3CL
RPS14
PITPNA
DTD1
DMAP1
AMZ2
B4GAT1
PRUNE1
MINDY1
NBN
MRPL48
TEX2
ADRM1
CERCAM
NDUFB3
FAM126B
PDE7A
SMARCE1
SMCO4
NEMF
NECTIN2
NKIRAS2
DNAJC7
KCNIP3
WDPCP
MDH1
PDE4A
NEDD1
COX7A2
RPS11
RNF220
METTL14
EIF2D
IDH1
PDCL
CCNT1
ZNF555
C8orf37
AURKAIP1
SMARCC2
PAFAH2
DCP1A
AGBL3
PGS1
TMEM222
RNF7
ZNF713
NDUFS5
COPB2
COASY
PTK6
PRDX1
MBTPS2
RNF38
TCTN3
SARS2
MRPS12
RIN1
DRAM2
CEPT1
C6orf89
MED13
PCCB
DMAC2
RBM25
WDR7
VIRMA
ZNF35
MEGF8
TP53I11
PTK2B
ELOVL6
POLR3B
ZNF76
SLC18B1
SNRPB2
C11orf49
OSGIN1
DEF8
PANK3
SCAND1
OPA1
COA1
COMMD2
EIF5A
SH3GLB2
CCDC59
ASB6
SIGMAR1
NOTCH2NLA
KXD1
KIF16B
SLC25A39
TMTC3
CEP290
CFAP298-TCP10L
CFAP298
SLC29A3
RBM4B
GTF2H2
MDFIC
EVI5L
RNF187
LRRC59
ZCCHC3
COA6
CDKN2AIPNL
TSKU
ATG4C
PTPN1
NSUN4
NECAP2
SS18L2
SEC22C
LMTK3
ARL14EP
RPAP1
SOCS3
RAB5B
COX16
SLC44A1
MITD1
SPAG16
CSTF2T
NELFCD
ARHGEF16
WASF1
CDC40
GTF2H5
ARAP1
COA3
CNTD1
STXBP3
ANKRD13C
NFE2L2
AJUBA
SNRPB
DST
BEND6
DHX8
RNF149
YIPF3
POLR1C
FOXK2
EED
UTP3
MARCHF7
TSSC4
FAM133B
NPAS1
HMGCR
ZNF638
GON4L
ZNF606
SYT11
PFDN4
EIF3F
BNIP1
KHDRBS3
RPL26
UGGT1
GDAP1
RGS9
CEP120
TOMM22
VARS1
UPP1
SBDS
RARS1
LEO1
PTPN4
AFG1L
PRKCA
NOL8
CENPP
MYORG
LARS2
C1S
CWF19L2
DDX59
KLF5
SREK1IP1
CWC27
SAR1B
TIA1
TCIRG1
RCC1
ADAM19
SCFD1
ABT1
MAFB
KDM5A
CCDC77
PRMT3
AGK
ZZEF1
CYB5D2
LSG1
TRIB1
MCOLN1
ARNT
RIF1
TIGD1
EIF4E2
CREBL2
STARD3NL
ZNF343
TIMM23
C1QBP
OMA1
DAB1
ZRANB2
KMT2A
RNFT1
NDUFS3
KBTBD4
BTBD10
C12orf73
BBS1
PPP6R1
CHST12
SLC35B1
ZFAND1
CRLS1
ASXL1
PCBD2
AP3S2
RBIS
POLM
PNKD
RTTN
SRP68
TEP1
EIF4A2
ISY1-RAB43
ISY1
MTHFD2L
DCAF10
SRPK1
ILF2
VPS37C
TRIM32
ASTN2
HDAC5
CZIB
DTX4
QKI
HASPIN
ARID1A
KTN1
AMOTL1
SEC14L1
CEP78
PSMB7
RAB5IF
MRPL1
TVP23B
TBC1D14
ACVR2A
SLC27A4
RPN1
C20orf27
ACYP2
SCNN1A
PPM1L
CLN5
SCML1
LRRC37A3
FAM200B
DUS1L
SAAL1
TTC32
ZNF501
IMPA1
DYNC2I1
HMGN4
ARHGEF11
PLEKHG4
POU2F2
ANKRD46
DNAJC25-GNG10
DNAJC25
POLI
ATF2
NHP2
MAP10
CARMIL1
SLC25A16
USP35
KCTD21
ROBO3
MRPS10
SUCLG1
NR1H3
ACP2
NVL
SNRPC
TADA1
GGCX
POLR3E
VAT1
COQ8B
RPS3A
RALB
BAG2
GSTA4
CDK11B
NLRP1
RPL24
DENND3
ZNF250
CSF2
PEMT
TRIM27
MAN2C1
MRPS31
HOXD8
HIPK1
SGSM1
RPL38
RNF207
NOL11
TUBE1
FAM229B
REX1BD
RPL6
TSC1
GFI1B
GABARAPL1
ZC3H6
ZSCAN26
SMG7
IREB2
MRPL35
CORO1C
DSN1
LAPTM5
MAD2L1BP
C16orf95
KDM4B
GTPBP2
ZNF629
SHLD2
GLUD1
CUL9
TEPSIN
PPP2R5B
NDUFAF8
TTLL7
TMEM8B
FAM221B
SPOCD1
NCOA7
SNX19
DCAF8
PPM1A
PTGS2
NOP14
KPNA2
GRK4
NICN1
PARP2
RIPOR3
H4C15
H4C14
TPRKB
RIOK1
CAGE1
ZNF674
MYH7B
GSS
CCDC38
AMDHD1
LSM5
SYMPK
FOXA3
CCDC71L
PRDM8
SPNS1
CFAP20
UMAD1
ERGIC2
CBX4
OPA3
YARS2
FAM83D
ZNF843
TIPIN
TUBG1
RETREG3
USP32
COL21A1
MIF4GD
VPS28
CHKA
SIRT4
MEGF9
SHFL
SSR3
ARL4A
TAS1R1
NOL9
PKIA
PSMD9
HPD
CTDSP1
BEGAIN
PIKFYVE
NOTCH2
PALLD
THEM6
USP15
TSEN15
ZMYM1
NARF
MNAT1
KPNA5
ATP8B2
TRMT1
ZNF77
TRIM26
USP42
FLCN
ZKSCAN2
SRP9
SRSF7
PHACTR4
EDC4
CDC37L1
TOE1
NCAPG
MUTYH
MTF1
COG2
CTPS1
RCAN1
TOM1L2
DRC3
SELENOH
CHCHD2
SCYL3
MTRF1L
LRCH4
FBXO24
SHPRH
TAF7
ADGRL1
RIOX1
MANBAL
NIPA2
FAM43A
GEMIN7
LLGL2
DHRS3
CCNL1
ZNF2
TUT1
TMEM255B
SUGT1
CCNB1
RAB2A
LGR6
CLCF1
RPN2
MROH8
SNX3
PRRG2
NOSIP
EHD2
ST6GALNAC4
MAD1L1
VPS16
PCED1A
ZSCAN22
POLR2J
USP2
SEC22B
BRF2
RNF213
MDM4
ADAR
MRPL15
PDE2A
TOP3B
H4C4
NIP7
COG8
PURB
FASTKD1
RBM43
FAM219A
CDC7
BAG6
AP3B1
KDSR
RAB5C
RGL2
ZNF256
RPL10A
PRR7
ELP5
CTDNEP1
FAAP20
MRPL42
PYROXD1
GPT2
DNAH7
WDR41
SAA1
RAB29
ABCD4
PDCL3
TMEM214
RCN1
DCAF11
NRL
RPS24
MYCBP2
ATG5
WTAP
TMEM164
SOD2
SEMA3D
TIPARP
EEF1AKMT1
DCT
PMM1
TSPAN10
NPLOC4
TBL1X
TMEM267
CASC3
CYP51A1
PUF60
PSMD11
MRPS28
CCR7
PDS5A
NCAM1
EIF2S2
UIMC1
AP2A2
HPS6
KCTD2
ATP5PD
PPP6R3
INTS8
PUS10
PEX13
SH2D5
PRKAR1B
VGLL4
RGPD8
RGPD6
RGPD5
YJU2
ZNF420
IPPK
PAK4
STX6
AKT2
MAPK1IP1L
PCYT1A
TOMM6
RPL11
TBC1D23
NPEPL1
SLC35B4
RLF
MRPS7
LIN7C